RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 FTSJ3Q8IY81 847 aaKnown RBP13.59□□□□□ -0.23
CRTC3-209ENST00000560320 IL17REQ8NFR9 667 aa13.59□□□□□ -0.23
CRTC3-209ENST00000560320 SSH1Q8WYL5 1049 aa13.59□□□□□ -0.23
CRTC3-209ENST00000560320 CHMP4AQ9BY43 222 aa13.59□□□□□ -0.23
CRTC3-209ENST00000560320 PLCH1Q4KWH8 1693 aa13.59□□□□□ -0.23
CRTC3-209ENST00000560320 SOS1Q07889 1333 aaPredicted RBP13.59□□□□□ -0.23
CRTC3-209ENST00000560320 SF3B2Q13435 895 aaKnown RBP13.58□□□□□ -0.24
CRTC3-209ENST00000560320 IFNL2Q8IZJ0 200 aa13.58□□□□□ -0.24
CRTC3-209ENST00000560320 MEGF6O75095 1541 aa13.58□□□□□ -0.24
CRTC3-209ENST00000560320 KDM3BQ7LBC6 1761 aa13.58□□□□□ -0.24
CRTC3-209ENST00000560320 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.24
CRTC3-209ENST00000560320 ELL2O00472 640 aaPredicted RBP13.57□□□□□ -0.24
CRTC3-209ENST00000560320 C8orf58Q8NAV2 365 aa13.57□□□□□ -0.24
CRTC3-209ENST00000560320 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
CRTC3-209ENST00000560320 ADAMTS7Q9UKP4 1686 aa13.56□□□□□ -0.24
CRTC3-209ENST00000560320 NWD2Q9ULI1 1742 aa13.56□□□□□ -0.24
CRTC3-209ENST00000560320 SIPA1L3O60292 1781 aaPredicted RBP13.56□□□□□ -0.24
CRTC3-209ENST00000560320 IL2RBP14784 551 aa13.56□□□□□ -0.24
CRTC3-209ENST00000560320 BRPF1P55201 1214 aaPredicted RBP13.56□□□□□ -0.24
CRTC3-209ENST00000560320 AAMPQ13685 434 aa13.56□□□□□ -0.24
CRTC3-209ENST00000560320 C20orf194Q5TEA3 1177 aa13.56□□□□□ -0.24
CRTC3-209ENST00000560320 B4GALNT3Q6L9W6 998 aa13.56□□□□□ -0.24
CRTC3-209ENST00000560320 MPRIPQ6WCQ1 1025 aa13.56□□□□□ -0.24
CRTC3-209ENST00000560320 TSPYL6Q8N831 410 aa13.56□□□□□ -0.24
CRTC3-209ENST00000560320 UTRNP46939 3433 aa13.55□□□□□ -0.24
CRTC3-209ENST00000560320 LARP1Q6PKG0 1096 aaKnown RBP13.55□□□□□ -0.24
CRTC3-209ENST00000560320 ATF7IPQ6VMQ6 1270 aa13.55□□□□□ -0.24
CRTC3-209ENST00000560320 DZIP1LQ8IYY4 767 aaKnown RBP13.55□□□□□ -0.24
CRTC3-209ENST00000560320 ZCRB1Q8TBF4 217 aaKnown RBP13.55□□□□□ -0.24
CRTC3-209ENST00000560320 LGR6Q9HBX8 967 aa13.55□□□□□ -0.24
CRTC3-209ENST00000560320 MIS18AQ9NYP9 233 aa13.55□□□□□ -0.24
CRTC3-209ENST00000560320 NOB1Q9ULX3 412 aaKnown RBP13.55□□□□□ -0.24
CRTC3-209ENST00000560320 PCDH11XQ9BZA7 1347 aa13.55□□□□□ -0.24
CRTC3-209ENST00000560320 PCDH11YQ9BZA8 1340 aa13.55□□□□□ -0.24
CRTC3-209ENST00000560320 BTBD11A6QL63 1104 aa13.54□□□□□ -0.24
CRTC3-209ENST00000560320 PHKG2P15735 406 aa13.54□□□□□ -0.24
CRTC3-209ENST00000560320 MRPL50Q8N5N7 158 aaKnown RBP13.54□□□□□ -0.24
CRTC3-209ENST00000560320 STK31Q9BXU1 1019 aa13.54□□□□□ -0.24
CRTC3-209ENST00000560320 WNK3Q9BYP7 1800 aa13.54□□□□□ -0.24
CRTC3-209ENST00000560320 CCDC30Q5VVM6 783 aa13.53□□□□□ -0.24
CRTC3-209ENST00000560320 PANK1Q8TE04 598 aa13.53□□□□□ -0.24
CRTC3-209ENST00000560320 ARHGAP45Q92619 1136 aa13.53□□□□□ -0.24
CRTC3-209ENST00000560320 DCAF5Q96JK2 942 aa13.53□□□□□ -0.24
CRTC3-209ENST00000560320 GJD4Q96KN9 370 aaPredicted RBP13.53□□□□□ -0.24
CRTC3-209ENST00000560320 API5Q9BZZ5 524 aaKnown RBP13.53□□□□□ -0.24
CRTC3-209ENST00000560320 CHMP4BQ9H444 224 aaKnown RBP13.53□□□□□ -0.24
CRTC3-209ENST00000560320 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.53□□□□□ -0.24
CRTC3-209ENST00000560320 CLUAP1Q96AJ1 413 aa13.52□□□□□ -0.25
CRTC3-209ENST00000560320 COG6Q9Y2V7 657 aa13.52□□□□□ -0.25
CRTC3-209ENST00000560320 GLI3P10071 1580 aa13.52□□□□□ -0.25
CRTC3-209ENST00000560320 NRAPQ86VF7 1730 aa13.52□□□□□ -0.25
CRTC3-209ENST00000560320 C1QTNF8P60827 252 aa13.51□□□□□ -0.25
CRTC3-209ENST00000560320 ZNF784Q8NCA9 323 aaPredicted RBP13.51□□□□□ -0.25
CRTC3-209ENST00000560320 USP35Q9P2H5 1018 aa13.51□□□□□ -0.25
CRTC3-209ENST00000560320 KAT6BQ8WYB5 2073 aa13.51□□□□□ -0.25
CRTC3-209ENST00000560320 TCERG1O14776 1098 aaKnown RBP13.5□□□□□ -0.25
CRTC3-209ENST00000560320 HOXB7P09629 217 aa13.5□□□□□ -0.25
CRTC3-209ENST00000560320 TRIM27P14373 513 aa13.5□□□□□ -0.25
CRTC3-209ENST00000560320 MVPQ14764 893 aaKnown RBP13.5□□□□□ -0.25
CRTC3-209ENST00000560320 R3HDM1Q15032 1099 aaKnown RBP13.5□□□□□ -0.25
CRTC3-209ENST00000560320 KRT24Q2M2I5 525 aa13.5□□□□□ -0.25
CRTC3-209ENST00000560320 CDCA7Q9BWT1 371 aaPredicted RBP13.5□□□□□ -0.25
CRTC3-209ENST00000560320 SLC52A2Q9HAB3 445 aa13.5□□□□□ -0.25
CRTC3-209ENST00000560320 DDX19BQ9UMR2 479 aa13.5□□□□□ -0.25
CRTC3-209ENST00000560320 SHANK3Q9BYB0 1731 aa13.5□□□□□ -0.25
CRTC3-209ENST00000560320 PTPRCP08575 1304 aa13.49□□□□□ -0.25
CRTC3-209ENST00000560320 CYP27B1O15528 508 aa13.49□□□□□ -0.25
CRTC3-209ENST00000560320 CABP4P57796 275 aa13.49□□□□□ -0.25
CRTC3-209ENST00000560320 EIF4A1P60842 406 aaKnown RBP13.49□□□□□ -0.25
CRTC3-209ENST00000560320 ITPRIPQ8IWB1 547 aa13.49□□□□□ -0.25
CRTC3-209ENST00000560320 THRAP3Q9Y2W1 955 aaKnown RBP13.49□□□□□ -0.25
CRTC3-209ENST00000560320 MRC1P22897 1456 aa13.48□□□□□ -0.25
CRTC3-209ENST00000560320 KDM6AO15550 1401 aaPredicted RBP13.48□□□□□ -0.25
CRTC3-209ENST00000560320 TTC5Q8N0Z6 440 aa13.48□□□□□ -0.25
CRTC3-209ENST00000560320 DDX54Q8TDD1 881 aaKnown RBP13.48□□□□□ -0.25
CRTC3-209ENST00000560320 CCDC9Q9Y3X0 531 aaKnown RBP13.48□□□□□ -0.25
CRTC3-209ENST00000560320 ERVV-2B6SEH9 535 aa13.47□□□□□ -0.25
CRTC3-209ENST00000560320 SLC4A2P04920 1241 aa13.47□□□□□ -0.25
CRTC3-209ENST00000560320 RLBP1P12271 317 aa13.47□□□□□ -0.25
CRTC3-209ENST00000560320 BAG6P46379 1132 aa13.47□□□□□ -0.25
CRTC3-209ENST00000560320 HDGFL1Q5TGJ6 251 aa13.47□□□□□ -0.25
CRTC3-209ENST00000560320 TNNQ9UQP3 1299 aa13.47□□□□□ -0.25
CRTC3-209ENST00000560320 EXOC5O00471 708 aa13.46□□□□□ -0.25
CRTC3-209ENST00000560320 NKX1-1Q15270 411 aaPredicted RBP13.46□□□□□ -0.25
CRTC3-209ENST00000560320 NFATC2IPQ8NCF5 419 aa13.46□□□□□ -0.25
CRTC3-209ENST00000560320 SLIT2O94813 1529 aa13.45□□□□□ -0.26
CRTC3-209ENST00000560320 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
CRTC3-209ENST00000560320 EIF2S2P20042 333 aaKnown RBP13.45□□□□□ -0.26
CRTC3-209ENST00000560320 ZNF790Q6PG37 636 aa13.45□□□□□ -0.26
CRTC3-209ENST00000560320 CENPQQ7L2Z9 268 aaPredicted RBP13.45□□□□□ -0.26
CRTC3-209ENST00000560320 TMEM57Q8N5G2 664 aa13.45□□□□□ -0.26
CRTC3-209ENST00000560320 DISP2A7MBM2 1401 aa13.45□□□□□ -0.26
CRTC3-209ENST00000560320 ABCC4O15439 1325 aa13.44□□□□□ -0.26
CRTC3-209ENST00000560320 SPATA31A1Q5TZJ5 1347 aa13.44□□□□□ -0.26
CRTC3-209ENST00000560320 NECTIN2Q92692 538 aa13.44□□□□□ -0.26
CRTC3-209ENST00000560320 ITGB4P16144 1822 aa13.43□□□□□ -0.26
CRTC3-209ENST00000560320 KCNQ3O43525 872 aa13.43□□□□□ -0.26
CRTC3-209ENST00000560320 UNC5CLQ8IV45 518 aa13.43□□□□□ -0.26
CRTC3-209ENST00000560320 FMNL2Q96PY5 1086 aa13.43□□□□□ -0.26
CRTC3-209ENST00000560320 LAMB4A4D0S4 1761 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms