RNA–Protein interactions for RNA: ENST00000560272.1

LINS1-208, Transcript of lines homolog 1, humanhuman

TSL 2

Gene LINS1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-208ENST00000560272 USHBP1Q8N6Y0 703 aa8.27□□□□□ -1.09
LINS1-208ENST00000560272 SGIP1Q9BQI5 828 aa8.27□□□□□ -1.09
LINS1-208ENST00000560272 CCNL1Q9UK58 526 aaPredicted RBP8.27□□□□□ -1.09
LINS1-208ENST00000560272 COLQQ9Y215 455 aaPredicted RBP8.27□□□□□ -1.09
LINS1-208ENST00000560272 NSD3Q9BZ95 1437 aa8.27□□□□□ -1.09
LINS1-208ENST00000560272 PCDH11XQ9BZA7 1347 aa8.27□□□□□ -1.09
LINS1-208ENST00000560272 PCDH11YQ9BZA8 1340 aa8.27□□□□□ -1.09
LINS1-208ENST00000560272 CLSPNQ9HAW4 1339 aa8.27□□□□□ -1.09
LINS1-208ENST00000560272 NSD2O96028 1365 aa8.26□□□□□ -1.09
LINS1-208ENST00000560272 HSP90AB2PQ58FF8 381 aa8.26□□□□□ -1.09
LINS1-208ENST00000560272 DOT1LQ8TEK3 1739 aa8.26□□□□□ -1.09
LINS1-208ENST00000560272 MAP3K5Q99683 1374 aa8.25□□□□□ -1.09
LINS1-208ENST00000560272 KIF20BQ96Q89 1820 aa8.25□□□□□ -1.09
LINS1-208ENST00000560272 PPM1GO15355 546 aaPredicted RBP8.25□□□□□ -1.09
LINS1-208ENST00000560272 KLHL34Q8N239 644 aa8.25□□□□□ -1.09
LINS1-208ENST00000560272 CARD14Q9BXL6 1004 aa8.25□□□□□ -1.09
LINS1-208ENST00000560272 PNPLA7Q6ZV29 1317 aa8.25□□□□□ -1.09
LINS1-208ENST00000560272 KCNQ4P56696 695 aa8.24□□□□□ -1.09
LINS1-208ENST00000560272 POLR3GLQ9BT43 218 aa8.24□□□□□ -1.09
LINS1-208ENST00000560272 PCGF6Q9BYE7 350 aa8.24□□□□□ -1.09
LINS1-208ENST00000560272 BMP2KQ9NSY1 1161 aaPredicted RBP8.24□□□□□ -1.09
LINS1-208ENST00000560272 GPR162Q16538 588 aa8.23□□□□□ -1.09
LINS1-208ENST00000560272 MPRIPQ6WCQ1 1025 aa8.23□□□□□ -1.09
LINS1-208ENST00000560272 SMARCC1Q92922 1105 aaPredicted RBP8.23□□□□□ -1.09
LINS1-208ENST00000560272 SPG7Q9UQ90 795 aa8.23□□□□□ -1.09
LINS1-208ENST00000560272 TRPC6Q9Y210 931 aa8.23□□□□□ -1.09
LINS1-208ENST00000560272 EMILIN1Q9Y6C2 1016 aa8.23□□□□□ -1.09
LINS1-208ENST00000560272 WASHC2AQ641Q2 1341 aa8.23□□□□□ -1.09
LINS1-208ENST00000560272 QSER1Q2KHR3 1735 aa8.23□□□□□ -1.09
LINS1-208ENST00000560272 SHANK3Q9BYB0 1731 aa8.23□□□□□ -1.09
LINS1-208ENST00000560272 PALLDQ8WX93 1383 aa8.22□□□□□ -1.09
LINS1-208ENST00000560272 FLAD1Q8NFF5 587 aa8.22□□□□□ -1.09
LINS1-208ENST00000560272 LY75O60449 1722 aa8.22□□□□□ -1.09
LINS1-208ENST00000560272 RGPD2P0DJD1 1756 aa8.22□□□□□ -1.09
LINS1-208ENST00000560272 CYP27B1O15528 508 aa8.21□□□□□ -1.1
LINS1-208ENST00000560272 EIF4G2P78344 907 aaKnown RBP eCLIP8.21□□□□□ -1.1
LINS1-208ENST00000560272 ZNF784Q8NCA9 323 aaPredicted RBP8.21□□□□□ -1.1
LINS1-208ENST00000560272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.21□□□□□ -1.1
LINS1-208ENST00000560272 NCAPD2Q15021 1401 aa8.2□□□□□ -1.1
LINS1-208ENST00000560272 TNNT2P45379 298 aaPredicted RBP8.2□□□□□ -1.1
LINS1-208ENST00000560272 COL23A1Q86Y22 540 aaPredicted RBP8.2□□□□□ -1.1
LINS1-208ENST00000560272 SLAIN1Q8ND83 568 aa8.2□□□□□ -1.1
LINS1-208ENST00000560272 AK7Q96M32 723 aa8.2□□□□□ -1.1
LINS1-208ENST00000560272 TMOD3Q9NYL9 352 aa8.2□□□□□ -1.1
LINS1-208ENST00000560272 POLKQ9UBT6 870 aa8.2□□□□□ -1.1
LINS1-208ENST00000560272 C5P01031 1676 aa8.19□□□□□ -1.1
LINS1-208ENST00000560272 NKX1-1Q15270 411 aaPredicted RBP8.19□□□□□ -1.1
LINS1-208ENST00000560272 MSL1Q68DK7 614 aa8.19□□□□□ -1.1
LINS1-208ENST00000560272 IFNL2Q8IZJ0 200 aa8.19□□□□□ -1.1
LINS1-208ENST00000560272 PIGBQ92521 554 aa8.19□□□□□ -1.1
LINS1-208ENST00000560272 EYA1Q99502 592 aa8.19□□□□□ -1.1
LINS1-208ENST00000560272 ANKRD26Q9UPS8 1709 aa8.19□□□□□ -1.1
LINS1-208ENST00000560272 PLEKHG2Q9H7P9 1386 aa8.19□□□□□ -1.1
LINS1-208ENST00000560272 COL24A1Q17RW2 1714 aa8.18□□□□□ -1.1
LINS1-208ENST00000560272 PKD1L3Q7Z443 1732 aa8.18□□□□□ -1.1
LINS1-208ENST00000560272 GRIN3BO60391 1043 aa8.18□□□□□ -1.1
LINS1-208ENST00000560272 PHKG2P15735 406 aa8.18□□□□□ -1.1
LINS1-208ENST00000560272 NLGN2Q8NFZ4 835 aa8.18□□□□□ -1.1
LINS1-208ENST00000560272 CCER1Q8TC90 406 aaPredicted RBP8.18□□□□□ -1.1
LINS1-208ENST00000560272 TUBGCP6Q96RT7 1819 aa8.17□□□□□ -1.1
LINS1-208ENST00000560272 KAT6BQ8WYB5 2073 aa8.17□□□□□ -1.1
LINS1-208ENST00000560272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.17□□□□□ -1.1
LINS1-208ENST00000560272 LOC102724428A0A0B4J2F2 783 aa8.17□□□□□ -1.1
LINS1-208ENST00000560272 PHF14O94880 888 aa8.17□□□□□ -1.1
LINS1-208ENST00000560272 HSP90AB1P08238 724 aaKnown RBP8.17□□□□□ -1.1
LINS1-208ENST00000560272 HSPA5P11021 654 aaKnown RBP8.17□□□□□ -1.1
LINS1-208ENST00000560272 SIK1P57059 783 aa8.17□□□□□ -1.1
LINS1-208ENST00000560272 EIF4A2Q14240 407 aaKnown RBP8.17□□□□□ -1.1
LINS1-208ENST00000560272 PANK3Q9H999 370 aa8.17□□□□□ -1.1
LINS1-208ENST00000560272 CD2APQ9Y5K6 639 aa8.17□□□□□ -1.1
LINS1-208ENST00000560272 C4BP0C0L5 1744 aa8.17□□□□□ -1.1
LINS1-208ENST00000560272 SEC24BO95487 1268 aa8.16□□□□□ -1.1
LINS1-208ENST00000560272 SSFA2P28290 1259 aa8.16□□□□□ -1.1
LINS1-208ENST00000560272 ATP6V1AP38606 617 aa8.16□□□□□ -1.1
LINS1-208ENST00000560272 MORC1Q86VD1 984 aa8.16□□□□□ -1.1
LINS1-208ENST00000560272 KIF12Q96FN5 646 aa8.16□□□□□ -1.1
LINS1-208ENST00000560272 TOGARAM1Q9Y4F4 1720 aa8.16□□□□□ -1.1
LINS1-208ENST00000560272 IGSF1Q8N6C5 1336 aa8.15□□□□□ -1.1
LINS1-208ENST00000560272 ERVV-2B6SEH9 535 aa8.15□□□□□ -1.1
LINS1-208ENST00000560272 GNPATO15228 680 aa8.15□□□□□ -1.1
LINS1-208ENST00000560272 AMOTQ4VCS5 1084 aa8.15□□□□□ -1.1
LINS1-208ENST00000560272 PLEKHO1Q53GL0 409 aaPredicted RBP8.15□□□□□ -1.1
LINS1-208ENST00000560272 LINC00116Q8NCU8 138 aa8.15□□□□□ -1.1
LINS1-208ENST00000560272 DCAF5Q96JK2 942 aa8.15□□□□□ -1.1
LINS1-208ENST00000560272 ASAP1Q9ULH1 1129 aa8.15□□□□□ -1.1
LINS1-208ENST00000560272 KNSTRNQ9Y448 316 aa8.15□□□□□ -1.1
LINS1-208ENST00000560272 GIGYF1O75420 1035 aaPredicted RBP8.14□□□□□ -1.11
LINS1-208ENST00000560272 YBX3P16989 372 aaKnown RBP eCLIP8.14□□□□□ -1.11
LINS1-208ENST00000560272 TIE1P35590 1138 aa8.14□□□□□ -1.11
LINS1-208ENST00000560272 C1QTNF8P60827 252 aa8.14□□□□□ -1.11
LINS1-208ENST00000560272 C1orf141Q5JVX7 400 aa8.14□□□□□ -1.11
LINS1-208ENST00000560272 TMEM121BQ9BXQ6 578 aaPredicted RBP8.14□□□□□ -1.11
LINS1-208ENST00000560272 ATG3Q9NT62 314 aa8.14□□□□□ -1.11
LINS1-208ENST00000560272 ITGB4P16144 1822 aa8.13□□□□□ -1.11
LINS1-208ENST00000560272 CABP4P57796 275 aa8.13□□□□□ -1.11
LINS1-208ENST00000560272 ITPK1Q13572 414 aa8.13□□□□□ -1.11
LINS1-208ENST00000560272 TRAPPC3LQ5T215 181 aa8.13□□□□□ -1.11
LINS1-208ENST00000560272 ZNF530Q6P9A1 599 aaPredicted RBP8.13□□□□□ -1.11
LINS1-208ENST00000560272 RTCBQ9Y3I0 505 aaKnown RBP8.13□□□□□ -1.11
LINS1-208ENST00000560272 MAP2P11137 1827 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms