RNA–Protein interactions for RNA: ENST00000560253.1

MEIS3-208, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,060 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-208ENST00000560253 NEFMP07197 916 aa19.96■□□□□ 0.79
MEIS3-208ENST00000560253 GAS2L2Q8NHY3 880 aa19.96■□□□□ 0.79
MEIS3-208ENST00000560253 RBM42Q9BTD8 480 aaKnown RBP19.96■□□□□ 0.79
MEIS3-208ENST00000560253 ATG3Q9NT62 314 aa19.96■□□□□ 0.79
MEIS3-208ENST00000560253 NFATC2IPQ8NCF5 419 aa19.95■□□□□ 0.78
MEIS3-208ENST00000560253 PNPLA7Q6ZV29 1317 aa19.95■□□□□ 0.78
MEIS3-208ENST00000560253 CEP350Q5VT06 3117 aa19.94■□□□□ 0.78
MEIS3-208ENST00000560253 TOGARAM1Q9Y4F4 1720 aa19.94■□□□□ 0.78
MEIS3-208ENST00000560253 U2AF1L5P0DN76 240 aaPredicted RBP19.94■□□□□ 0.78
MEIS3-208ENST00000560253 U2AF1Q01081 240 aaKnown RBP eCLIP19.94■□□□□ 0.78
MEIS3-208ENST00000560253 DDX10Q13206 875 aaKnown RBP19.94■□□□□ 0.78
MEIS3-208ENST00000560253 MTHFSDQ2M296 383 aaKnown RBP19.94■□□□□ 0.78
MEIS3-208ENST00000560253 SYT17Q9BSW7 474 aa19.94■□□□□ 0.78
MEIS3-208ENST00000560253 RNMTO43148 476 aaKnown RBP19.92■□□□□ 0.78
MEIS3-208ENST00000560253 RALBP1Q15311 655 aa19.92■□□□□ 0.78
MEIS3-208ENST00000560253 ARXQ96QS3 562 aa19.92■□□□□ 0.78
MEIS3-208ENST00000560253 GIGYF1O75420 1035 aaPredicted RBP19.91■□□□□ 0.78
MEIS3-208ENST00000560253 FCHSD2O94868 740 aa19.91■□□□□ 0.78
MEIS3-208ENST00000560253 FHDC1Q9C0D6 1143 aaPredicted RBP19.91■□□□□ 0.78
MEIS3-208ENST00000560253 SLC52A2Q9HAB3 445 aa19.91■□□□□ 0.78
MEIS3-208ENST00000560253 KDM6AO15550 1401 aaPredicted RBP19.91■□□□□ 0.78
MEIS3-208ENST00000560253 GNAT3A8MTJ3 354 aa19.9■□□□□ 0.78
MEIS3-208ENST00000560253 COL23A1Q86Y22 540 aaPredicted RBP19.9■□□□□ 0.78
MEIS3-208ENST00000560253 PNNQ9H307 717 aaKnown RBP19.9■□□□□ 0.78
MEIS3-208ENST00000560253 COL3A1P02461 1466 aaPredicted RBP19.9■□□□□ 0.78
MEIS3-208ENST00000560253 PTCD1O75127 700 aaKnown RBP19.89■□□□□ 0.77
MEIS3-208ENST00000560253 C5P01031 1676 aa19.89■□□□□ 0.77
MEIS3-208ENST00000560253 SSFA2P28290 1259 aa19.89■□□□□ 0.77
MEIS3-208ENST00000560253 PRKAR2BP31323 418 aa19.89■□□□□ 0.77
MEIS3-208ENST00000560253 TEFQ10587 303 aa19.89■□□□□ 0.77
MEIS3-208ENST00000560253 QSER1Q2KHR3 1735 aa19.89■□□□□ 0.77
MEIS3-208ENST00000560253 LGR6Q9HBX8 967 aa19.89■□□□□ 0.77
MEIS3-208ENST00000560253 GNPATO15228 680 aa19.87■□□□□ 0.77
MEIS3-208ENST00000560253 PHF14O94880 888 aa19.87■□□□□ 0.77
MEIS3-208ENST00000560253 RC3H1Q5TC82 1133 aaKnown RBP19.87■□□□□ 0.77
MEIS3-208ENST00000560253 LINC00116Q8NCU8 138 aa19.87■□□□□ 0.77
MEIS3-208ENST00000560253 RTF1Q92541 710 aaKnown RBP19.87■□□□□ 0.77
MEIS3-208ENST00000560253 RTCBQ9Y3I0 505 aaKnown RBP19.87■□□□□ 0.77
MEIS3-208ENST00000560253 ITPK1Q13572 414 aa19.86■□□□□ 0.77
MEIS3-208ENST00000560253 SGIP1Q9BQI5 828 aa19.86■□□□□ 0.77
MEIS3-208ENST00000560253 RSPH6AQ9H0K4 717 aa19.86■□□□□ 0.77
MEIS3-208ENST00000560253 MAP3K5Q99683 1374 aa19.85■□□□□ 0.77
MEIS3-208ENST00000560253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.85■□□□□ 0.77
MEIS3-208ENST00000560253 TTC5Q8N0Z6 440 aa19.85■□□□□ 0.77
MEIS3-208ENST00000560253 C4BP0C0L5 1744 aa19.85■□□□□ 0.77
MEIS3-208ENST00000560253 TAF1LQ8IZX4 1826 aa19.84■□□□□ 0.77
MEIS3-208ENST00000560253 TRAPPC3LQ5T215 181 aa19.84■□□□□ 0.77
MEIS3-208ENST00000560253 KLHL34Q8N239 644 aa19.84■□□□□ 0.77
MEIS3-208ENST00000560253 SCN11AQ9UI33 1791 aa19.83■□□□□ 0.77
MEIS3-208ENST00000560253 ADRA2BP18089 450 aa19.82■□□□□ 0.76
MEIS3-208ENST00000560253 PHACTR3Q96KR7 559 aa19.82■□□□□ 0.76
MEIS3-208ENST00000560253 CNTNAP4Q9C0A0 1308 aa19.81■□□□□ 0.76
MEIS3-208ENST00000560253 RPS6KA4O75676 772 aa19.81■□□□□ 0.76
MEIS3-208ENST00000560253 HTATSF1O43719 755 aaKnown RBP19.8■□□□□ 0.76
MEIS3-208ENST00000560253 RFC4P35249 363 aa19.8■□□□□ 0.76
MEIS3-208ENST00000560253 MSL1Q68DK7 614 aa19.8■□□□□ 0.76
MEIS3-208ENST00000560253 IL17REQ8NFR9 667 aa19.8■□□□□ 0.76
MEIS3-208ENST00000560253 SLC4A9Q96Q91 983 aa19.8■□□□□ 0.76
MEIS3-208ENST00000560253 MYBBP1AQ9BQG0 1328 aaKnown RBP19.79■□□□□ 0.76
MEIS3-208ENST00000560253 ZNF831Q5JPB2 1677 aa19.79■□□□□ 0.76
MEIS3-208ENST00000560253 SLC39A6Q13433 755 aa19.79■□□□□ 0.76
MEIS3-208ENST00000560253 VSIG10Q8N0Z9 540 aa19.79■□□□□ 0.76
MEIS3-208ENST00000560253 TUBGCP6Q96RT7 1819 aa19.79■□□□□ 0.76
MEIS3-208ENST00000560253 MAPK8IP3Q9UPT6 1336 aa19.78■□□□□ 0.76
MEIS3-208ENST00000560253 CRKLP46109 303 aaKnown RBP19.78■□□□□ 0.76
MEIS3-208ENST00000560253 NLGN1Q8N2Q7 840 aa19.78■□□□□ 0.76
MEIS3-208ENST00000560253 TEX13AQ9BXU3 409 aaPredicted RBP19.78■□□□□ 0.76
MEIS3-208ENST00000560253 STARD3NLO95772 234 aa19.77■□□□□ 0.76
MEIS3-208ENST00000560253 MRC1P22897 1456 aa19.77■□□□□ 0.76
MEIS3-208ENST00000560253 BTBD11A6QL63 1104 aa19.76■□□□□ 0.75
MEIS3-208ENST00000560253 ZNF790Q6PG37 636 aa19.76■□□□□ 0.75
MEIS3-208ENST00000560253 ARHGEF1Q92888 912 aaKnown RBP19.76■□□□□ 0.75
MEIS3-208ENST00000560253 NPM2Q86SE8 214 aaKnown RBP19.75■□□□□ 0.75
MEIS3-208ENST00000560253 DNAJC10Q8IXB1 793 aa19.75■□□□□ 0.75
MEIS3-208ENST00000560253 CCDC87Q9NVE4 849 aa19.75■□□□□ 0.75
MEIS3-208ENST00000560253 UBR3Q6ZT12 1888 aa19.75■□□□□ 0.75
MEIS3-208ENST00000560253 SMIM5Q71RC9 77 aa19.74■□□□□ 0.75
MEIS3-208ENST00000560253 FMNL2Q96PY5 1086 aa19.74■□□□□ 0.75
MEIS3-208ENST00000560253 WDR43Q15061 677 aaKnown RBP eCLIP19.73■□□□□ 0.75
MEIS3-208ENST00000560253 AMIGO3Q86WK7 504 aa19.73■□□□□ 0.75
MEIS3-208ENST00000560253 CD2APQ9Y5K6 639 aa19.73■□□□□ 0.75
MEIS3-208ENST00000560253 CEMIPQ8WUJ3 1361 aa19.72■□□□□ 0.75
MEIS3-208ENST00000560253 ADAMTS7Q9UKP4 1686 aa19.72■□□□□ 0.75
MEIS3-208ENST00000560253 ZPR1O75312 459 aa19.72■□□□□ 0.75
MEIS3-208ENST00000560253 CYP19A1P11511 503 aaPredicted RBP19.72■□□□□ 0.75
MEIS3-208ENST00000560253 GPR162Q16538 588 aa19.72■□□□□ 0.75
MEIS3-208ENST00000560253 MCM10Q7L590 875 aa19.72■□□□□ 0.75
MEIS3-208ENST00000560253 NFE2L2Q16236 605 aa19.71■□□□□ 0.75
MEIS3-208ENST00000560253 PNISRQ8TF01 805 aaKnown RBP19.71■□□□□ 0.75
MEIS3-208ENST00000560253 VIRMAQ69YN4 1812 aaKnown RBP19.71■□□□□ 0.75
MEIS3-208ENST00000560253 COL24A1Q17RW2 1714 aa19.71■□□□□ 0.75
MEIS3-208ENST00000560253 ZNF316A6NFI3 1004 aaPredicted RBP19.7■□□□□ 0.74
MEIS3-208ENST00000560253 TAF7Q15545 349 aaPredicted RBP19.7■□□□□ 0.74
MEIS3-208ENST00000560253 INTS5Q6P9B9 1019 aaKnown RBP19.7■□□□□ 0.74
MEIS3-208ENST00000560253 PELP1Q8IZL8 1130 aaKnown RBP19.7■□□□□ 0.74
MEIS3-208ENST00000560253 ZNF496Q96IT1 587 aaPredicted RBP19.7■□□□□ 0.74
MEIS3-208ENST00000560253 PLEKHF1Q96S99 279 aa19.7■□□□□ 0.74
MEIS3-208ENST00000560253 PRKRIP1Q9H875 184 aaPredicted RBP19.7■□□□□ 0.74
MEIS3-208ENST00000560253 PARP3Q9Y6F1 533 aa19.7■□□□□ 0.74
MEIS3-208ENST00000560253 HEG1Q9ULI3 1381 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms