RNA–Protein interactions for RNA: ENST00000559779.1

CERNA1-201, Transcript of competing endogenous lncRNA 1 for miR-4707-5p and miR-4767, humanhuman

TSL 3 BASIC

Gene CERNA1, Length 908 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA1-201ENST00000559779 NPC1L1Q9UHC9 1359 aa21.99■■□□□ 1.11
CERNA1-201ENST00000559779 PHF14O94880 888 aa21.98■■□□□ 1.11
CERNA1-201ENST00000559779 MSL1Q68DK7 614 aa21.98■■□□□ 1.11
CERNA1-201ENST00000559779 KDM6AO15550 1401 aaPredicted RBP21.97■■□□□ 1.11
CERNA1-201ENST00000559779 LINC00116Q8NCU8 138 aa21.97■■□□□ 1.11
CERNA1-201ENST00000559779 RBM42Q9BTD8 480 aaKnown RBP21.97■■□□□ 1.11
CERNA1-201ENST00000559779 ITPK1Q13572 414 aa21.96■■□□□ 1.11
CERNA1-201ENST00000559779 COL24A1Q17RW2 1714 aa21.95■■□□□ 1.1
CERNA1-201ENST00000559779 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.94■■□□□ 1.1
CERNA1-201ENST00000559779 YY1P25490 414 aa21.94■■□□□ 1.1
CERNA1-201ENST00000559779 SMIM5Q71RC9 77 aa21.94■■□□□ 1.1
CERNA1-201ENST00000559779 MAP3K5Q99683 1374 aa21.94■■□□□ 1.1
CERNA1-201ENST00000559779 U2SURPO15042 1029 aaKnown RBP21.93■■□□□ 1.1
CERNA1-201ENST00000559779 GNPATO15228 680 aa21.93■■□□□ 1.1
CERNA1-201ENST00000559779 AKAP4Q5JQC9 854 aa21.93■■□□□ 1.1
CERNA1-201ENST00000559779 AMIGO3Q86WK7 504 aa21.93■■□□□ 1.1
CERNA1-201ENST00000559779 NFATC2IPQ8NCF5 419 aa21.93■■□□□ 1.1
CERNA1-201ENST00000559779 SSFA2P28290 1259 aa21.91■■□□□ 1.1
CERNA1-201ENST00000559779 UBR3Q6ZT12 1888 aa21.91■■□□□ 1.1
CERNA1-201ENST00000559779 PTCD1O75127 700 aaKnown RBP21.9■■□□□ 1.1
CERNA1-201ENST00000559779 GPR162Q16538 588 aa21.89■■□□□ 1.09
CERNA1-201ENST00000559779 MTHFSDQ2M296 383 aaKnown RBP21.89■■□□□ 1.09
CERNA1-201ENST00000559779 CFAP53Q96M91 514 aa21.89■■□□□ 1.09
CERNA1-201ENST00000559779 SLC4A9Q96Q91 983 aa21.89■■□□□ 1.09
CERNA1-201ENST00000559779 PELP1Q8IZL8 1130 aaKnown RBP21.88■■□□□ 1.09
CERNA1-201ENST00000559779 LGR6Q9HBX8 967 aa21.88■■□□□ 1.09
CERNA1-201ENST00000559779 SCN11AQ9UI33 1791 aa21.88■■□□□ 1.09
CERNA1-201ENST00000559779 COL3A1P02461 1466 aaPredicted RBP21.88■■□□□ 1.09
CERNA1-201ENST00000559779 NLGN2Q8NFZ4 835 aa21.87■■□□□ 1.09
CERNA1-201ENST00000559779 SLC52A2Q9HAB3 445 aa21.86■■□□□ 1.09
CERNA1-201ENST00000559779 RTCBQ9Y3I0 505 aaKnown RBP21.86■■□□□ 1.09
CERNA1-201ENST00000559779 RNMTO43148 476 aaKnown RBP21.85■■□□□ 1.09
CERNA1-201ENST00000559779 TRAPPC3LQ5T215 181 aa21.85■■□□□ 1.09
CERNA1-201ENST00000559779 ZNF831Q5JPB2 1677 aa21.85■■□□□ 1.09
CERNA1-201ENST00000559779 PPP2R1AP30153 589 aa21.83■■□□□ 1.09
CERNA1-201ENST00000559779 CNTNAP4Q9C0A0 1308 aa21.82■■□□□ 1.08
CERNA1-201ENST00000559779 RC3H1Q5TC82 1133 aaKnown RBP21.82■■□□□ 1.08
CERNA1-201ENST00000559779 NUDCQ9Y266 331 aa21.82■■□□□ 1.08
CERNA1-201ENST00000559779 COL5A3P25940 1745 aaPredicted RBP21.82■■□□□ 1.08
CERNA1-201ENST00000559779 CD2APQ9Y5K6 639 aa21.81■■□□□ 1.08
CERNA1-201ENST00000559779 RPS6KA4O75676 772 aa21.8■■□□□ 1.08
CERNA1-201ENST00000559779 SLC39A6Q13433 755 aa21.8■■□□□ 1.08
CERNA1-201ENST00000559779 GAS2L2Q8NHY3 880 aa21.8■■□□□ 1.08
CERNA1-201ENST00000559779 ARHGEF1Q92888 912 aaKnown RBP21.8■■□□□ 1.08
CERNA1-201ENST00000559779 VIRMAQ69YN4 1812 aaKnown RBP21.8■■□□□ 1.08
CERNA1-201ENST00000559779 ADRA2BP18089 450 aa21.79■■□□□ 1.08
CERNA1-201ENST00000559779 RFC4P35249 363 aa21.79■■□□□ 1.08
CERNA1-201ENST00000559779 CRKLP46109 303 aaKnown RBP21.79■■□□□ 1.08
CERNA1-201ENST00000559779 MRC1P22897 1456 aa21.78■■□□□ 1.08
CERNA1-201ENST00000559779 U2AF1L5P0DN76 240 aaPredicted RBP21.78■■□□□ 1.08
CERNA1-201ENST00000559779 PRKAR2BP31323 418 aa21.78■■□□□ 1.08
CERNA1-201ENST00000559779 U2AF1Q01081 240 aaKnown RBP eCLIP21.78■■□□□ 1.08
CERNA1-201ENST00000559779 GNAT3A8MTJ3 354 aa21.77■■□□□ 1.08
CERNA1-201ENST00000559779 MMP10P09238 476 aa21.77■■□□□ 1.08
CERNA1-201ENST00000559779 TJP1Q07157 1748 aa21.77■■□□□ 1.08
CERNA1-201ENST00000559779 DNAJC10Q8IXB1 793 aa21.76■■□□□ 1.07
CERNA1-201ENST00000559779 NLGN1Q8N2Q7 840 aa21.76■■□□□ 1.07
CERNA1-201ENST00000559779 TEFQ10587 303 aa21.75■■□□□ 1.07
CERNA1-201ENST00000559779 PHACTR3Q96KR7 559 aa21.75■■□□□ 1.07
CERNA1-201ENST00000559779 RSPH6AQ9H0K4 717 aa21.75■■□□□ 1.07
CERNA1-201ENST00000559779 MYH14Q7Z406 1995 aaKnown RBP21.75■■□□□ 1.07
CERNA1-201ENST00000559779 ADAMTS7Q9UKP4 1686 aa21.75■■□□□ 1.07
CERNA1-201ENST00000559779 TTC5Q8N0Z6 440 aa21.74■■□□□ 1.07
CERNA1-201ENST00000559779 CHD4Q14839 1912 aa21.74■■□□□ 1.07
CERNA1-201ENST00000559779 YBX3P16989 372 aaKnown RBP eCLIP21.73■■□□□ 1.07
CERNA1-201ENST00000559779 IL17REQ8NFR9 667 aa21.73■■□□□ 1.07
CERNA1-201ENST00000559779 CICQ96RK0 1608 aaPredicted RBP21.73■■□□□ 1.07
CERNA1-201ENST00000559779 GRIN3BO60391 1043 aa21.72■■□□□ 1.07
CERNA1-201ENST00000559779 GYS1P13807 737 aa21.72■■□□□ 1.07
CERNA1-201ENST00000559779 INTS5Q6P9B9 1019 aaKnown RBP21.72■■□□□ 1.07
CERNA1-201ENST00000559779 CCDC87Q9NVE4 849 aa21.72■■□□□ 1.07
CERNA1-201ENST00000559779 KCPQ6ZWJ8 1503 aa21.71■■□□□ 1.07
CERNA1-201ENST00000559779 WWC3Q9ULE0 1092 aa21.71■■□□□ 1.07
CERNA1-201ENST00000559779 C4AP0C0L4 1744 aa21.71■■□□□ 1.07
CERNA1-201ENST00000559779 FCHSD2O94868 740 aa21.7■■□□□ 1.06
CERNA1-201ENST00000559779 CYP19A1P11511 503 aaPredicted RBP21.7■■□□□ 1.06
CERNA1-201ENST00000559779 SRP68Q9UHB9 627 aaKnown RBP21.7■■□□□ 1.06
CERNA1-201ENST00000559779 UTRNP46939 3433 aa21.7■■□□□ 1.06
CERNA1-201ENST00000559779 VSIG10Q8N0Z9 540 aa21.69■■□□□ 1.06
CERNA1-201ENST00000559779 ZNF784Q8NCA9 323 aaPredicted RBP21.69■■□□□ 1.06
CERNA1-201ENST00000559779 PARP3Q9Y6F1 533 aa21.69■■□□□ 1.06
CERNA1-201ENST00000559779 USP42Q9H9J4 1324 aaKnown RBP21.68■■□□□ 1.06
CERNA1-201ENST00000559779 ZPR1O75312 459 aa21.67■■□□□ 1.06
CERNA1-201ENST00000559779 ZNF790Q6PG37 636 aa21.67■■□□□ 1.06
CERNA1-201ENST00000559779 RTF1Q92541 710 aaKnown RBP21.67■■□□□ 1.06
CERNA1-201ENST00000559779 FKBP8Q14318 412 aa21.66■■□□□ 1.06
CERNA1-201ENST00000559779 ZNF496Q96IT1 587 aaPredicted RBP21.66■■□□□ 1.06
CERNA1-201ENST00000559779 ZBTB1Q9Y2K1 713 aa21.66■■□□□ 1.06
CERNA1-201ENST00000559779 UBR2Q8IWV8 1755 aa21.66■■□□□ 1.06
CERNA1-201ENST00000559779 SOS1Q07889 1333 aaPredicted RBP21.65■■□□□ 1.06
CERNA1-201ENST00000559779 BTBD11A6QL63 1104 aa21.65■■□□□ 1.06
CERNA1-201ENST00000559779 STARD3NLO95772 234 aa21.65■■□□□ 1.06
CERNA1-201ENST00000559779 NEFMP07197 916 aa21.65■■□□□ 1.06
CERNA1-201ENST00000559779 CANXP27824 592 aaKnown RBP21.65■■□□□ 1.06
CERNA1-201ENST00000559779 CEMIPQ8WUJ3 1361 aa21.64■■□□□ 1.06
CERNA1-201ENST00000559779 USPL1Q5W0Q7 1092 aa21.64■■□□□ 1.05
CERNA1-201ENST00000559779 MCM10Q7L590 875 aa21.64■■□□□ 1.05
CERNA1-201ENST00000559779 SIPA1L3O60292 1781 aaPredicted RBP21.64■■□□□ 1.05
CERNA1-201ENST00000559779 DDX10Q13206 875 aaKnown RBP21.63■■□□□ 1.05
CERNA1-201ENST00000559779 FMNL2Q96PY5 1086 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms