RNA–Protein interactions for RNA: ENST00000559709.5

APBA2-209, Transcript of amyloid beta precursor protein binding family A member 2, human

TSL 4

Gene APBA2, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBA2-209	ENST00000559709	LINC00116	Q8NCU8	138 aa		32.52	■■■□□ 2.8
APBA2-209	ENST00000559709	AK7	Q96M32	723 aa		32.51	■■■□□ 2.79
APBA2-209	ENST00000559709	ARX	Q96QS3	562 aa		32.51	■■■□□ 2.79
APBA2-209	ENST00000559709	TAF1L	Q8IZX4	1826 aa		32.51	■■■□□ 2.79
APBA2-209	ENST00000559709	C4B	P0C0L5	1744 aa		32.49	■■■□□ 2.79
APBA2-209	ENST00000559709	FLAD1	Q8NFF5	587 aa		32.49	■■■□□ 2.79
APBA2-209	ENST00000559709	RBM42	Q9BTD8	480 aa	Known RBP	32.49	■■■□□ 2.79
APBA2-209	ENST00000559709	LGR6	Q9HBX8	967 aa		32.49	■■■□□ 2.79
APBA2-209	ENST00000559709	SLC4A9	Q96Q91	983 aa		32.48	■■■□□ 2.79
APBA2-209	ENST00000559709	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.48	■■■□□ 2.79
APBA2-209	ENST00000559709	AMIGO3	Q86WK7	504 aa		32.47	■■■□□ 2.79
APBA2-209	ENST00000559709	RNMT	O43148	476 aa	Known RBP	32.46	■■■□□ 2.79
APBA2-209	ENST00000559709	POLD1	P28340	1107 aa		32.46	■■■□□ 2.79
APBA2-209	ENST00000559709	SYT17	Q9BSW7	474 aa		32.45	■■■□□ 2.79
APBA2-209	ENST00000559709	NUDC	Q9Y266	331 aa		32.45	■■■□□ 2.79
APBA2-209	ENST00000559709	SMIM5	Q71RC9	77 aa		32.44	■■■□□ 2.78
APBA2-209	ENST00000559709	SLC52A2	Q9HAB3	445 aa		32.44	■■■□□ 2.78
APBA2-209	ENST00000559709	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.42	■■■□□ 2.78
APBA2-209	ENST00000559709	PHF14	O94880	888 aa		32.42	■■■□□ 2.78
APBA2-209	ENST00000559709	SCN11A	Q9UI33	1791 aa		32.41	■■■□□ 2.78
APBA2-209	ENST00000559709	PTCD1	O75127	700 aa	Known RBP	32.41	■■■□□ 2.78
APBA2-209	ENST00000559709	COL24A1	Q17RW2	1714 aa		32.4	■■■□□ 2.78
APBA2-209	ENST00000559709	GNPAT	O15228	680 aa		32.4	■■■□□ 2.78
APBA2-209	ENST00000559709	SSFA2	P28290	1259 aa		32.4	■■■□□ 2.78
APBA2-209	ENST00000559709	MSL1	Q68DK7	614 aa		32.4	■■■□□ 2.78
APBA2-209	ENST00000559709	GAS2L2	Q8NHY3	880 aa		32.4	■■■□□ 2.78
APBA2-209	ENST00000559709	RSPH6A	Q9H0K4	717 aa		32.4	■■■□□ 2.78
APBA2-209	ENST00000559709	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.39	■■■□□ 2.78
APBA2-209	ENST00000559709	PRKAR2B	P31323	418 aa		32.39	■■■□□ 2.78
APBA2-209	ENST00000559709	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.39	■■■□□ 2.78
APBA2-209	ENST00000559709	DDX10	Q13206	875 aa	Known RBP	32.37	■■■□□ 2.77
APBA2-209	ENST00000559709	PHACTR3	Q96KR7	559 aa		32.37	■■■□□ 2.77
APBA2-209	ENST00000559709	ZNF831	Q5JPB2	1677 aa		32.37	■■■□□ 2.77
APBA2-209	ENST00000559709	MRC1	P22897	1456 aa		32.36	■■■□□ 2.77
APBA2-209	ENST00000559709	MAP3K5	Q99683	1374 aa		32.36	■■■□□ 2.77
APBA2-209	ENST00000559709	UBR3	Q6ZT12	1888 aa		32.35	■■■□□ 2.77
APBA2-209	ENST00000559709	GNAT3	A8MTJ3	354 aa		32.35	■■■□□ 2.77
APBA2-209	ENST00000559709	RC3H1	Q5TC82	1133 aa	Known RBP	32.35	■■■□□ 2.77
APBA2-209	ENST00000559709	DCAF8L1	A6NGE4	600 aa		32.34	■■■□□ 2.77
APBA2-209	ENST00000559709	ADAMTS7	Q9UKP4	1686 aa		32.34	■■■□□ 2.77
APBA2-209	ENST00000559709	CNTNAP4	Q9C0A0	1308 aa		32.33	■■■□□ 2.77
APBA2-209	ENST00000559709	SLC39A6	Q13433	755 aa		32.33	■■■□□ 2.77
APBA2-209	ENST00000559709	KLHL34	Q8N239	644 aa		32.33	■■■□□ 2.77
APBA2-209	ENST00000559709	IL17RE	Q8NFR9	667 aa		32.33	■■■□□ 2.77
APBA2-209	ENST00000559709	FCHSD2	O94868	740 aa		32.32	■■■□□ 2.76
APBA2-209	ENST00000559709	RTCB	Q9Y3I0	505 aa	Known RBP	32.32	■■■□□ 2.76
APBA2-209	ENST00000559709	TRAPPC3L	Q5T215	181 aa		32.29	■■■□□ 2.76
APBA2-209	ENST00000559709	RPS6KA4	O75676	772 aa		32.28	■■■□□ 2.76
APBA2-209	ENST00000559709	COL5A3	P25940	1745 aa	Predicted RBP	32.27	■■■□□ 2.76
APBA2-209	ENST00000559709	RALBP1	Q15311	655 aa		32.27	■■■□□ 2.76
APBA2-209	ENST00000559709	CRKL	P46109	303 aa	Known RBP	32.26	■■■□□ 2.75
APBA2-209	ENST00000559709	TEF	Q10587	303 aa		32.26	■■■□□ 2.75
APBA2-209	ENST00000559709	ADRA2B	P18089	450 aa		32.25	■■■□□ 2.75
APBA2-209	ENST00000559709	DNAJC10	Q8IXB1	793 aa		32.25	■■■□□ 2.75
APBA2-209	ENST00000559709	ARHGEF1	Q92888	912 aa	Known RBP	32.25	■■■□□ 2.75
APBA2-209	ENST00000559709	VIRMA	Q69YN4	1812 aa	Known RBP	32.23	■■■□□ 2.75
APBA2-209	ENST00000559709	TJP1	Q07157	1748 aa		32.23	■■■□□ 2.75
APBA2-209	ENST00000559709	CEMIP	Q8WUJ3	1361 aa		32.22	■■■□□ 2.75
APBA2-209	ENST00000559709	KCP	Q6ZWJ8	1503 aa		32.22	■■■□□ 2.75
APBA2-209	ENST00000559709	ZEB1	P37275	1124 aa	Predicted RBP	32.22	■■■□□ 2.75
APBA2-209	ENST00000559709	NLGN2	Q8NFZ4	835 aa		32.22	■■■□□ 2.75
APBA2-209	ENST00000559709	INTS5	Q6P9B9	1019 aa	Known RBP	32.21	■■■□□ 2.75
APBA2-209	ENST00000559709	CIC	Q96RK0	1608 aa	Predicted RBP	32.21	■■■□□ 2.75
APBA2-209	ENST00000559709	TTC5	Q8N0Z6	440 aa		32.2	■■■□□ 2.75
APBA2-209	ENST00000559709	RFC4	P35249	363 aa		32.19	■■■□□ 2.74
APBA2-209	ENST00000559709	VSIG10	Q8N0Z9	540 aa		32.19	■■■□□ 2.74
APBA2-209	ENST00000559709	MYH14	Q7Z406	1995 aa	Known RBP	32.18	■■■□□ 2.74
APBA2-209	ENST00000559709	CYP19A1	P11511	503 aa	Predicted RBP	32.18	■■■□□ 2.74
APBA2-209	ENST00000559709	ZNF790	Q6PG37	636 aa		32.18	■■■□□ 2.74
APBA2-209	ENST00000559709	RTF1	Q92541	710 aa	Known RBP	32.17	■■■□□ 2.74
APBA2-209	ENST00000559709	CCDC87	Q9NVE4	849 aa		32.17	■■■□□ 2.74
APBA2-209	ENST00000559709	CD2AP	Q9Y5K6	639 aa		32.17	■■■□□ 2.74
APBA2-209	ENST00000559709	NLGN1	Q8N2Q7	840 aa		32.16	■■■□□ 2.74
APBA2-209	ENST00000559709	GYS1	P13807	737 aa		32.15	■■■□□ 2.74
APBA2-209	ENST00000559709	MCM10	Q7L590	875 aa		32.15	■■■□□ 2.74
APBA2-209	ENST00000559709	MMP10	P09238	476 aa		32.14	■■■□□ 2.74
APBA2-209	ENST00000559709	ZNF496	Q96IT1	587 aa	Predicted RBP	32.14	■■■□□ 2.74
APBA2-209	ENST00000559709	PLEKHF1	Q96S99	279 aa		32.14	■■■□□ 2.74
APBA2-209	ENST00000559709	HTATSF1	O43719	755 aa	Known RBP	32.13	■■■□□ 2.73
APBA2-209	ENST00000559709	NEFM	P07197	916 aa		32.13	■■■□□ 2.73
APBA2-209	ENST00000559709	GPR162	Q16538	588 aa		32.13	■■■□□ 2.73
APBA2-209	ENST00000559709	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.13	■■■□□ 2.73
APBA2-209	ENST00000559709	BTBD11	A6QL63	1104 aa		32.12	■■■□□ 2.73
APBA2-209	ENST00000559709	DCTN1	Q14203	1278 aa		32.12	■■■□□ 2.73
APBA2-209	ENST00000559709	UBR2	Q8IWV8	1755 aa		32.12	■■■□□ 2.73
APBA2-209	ENST00000559709	YY1	P25490	414 aa		32.11	■■■□□ 2.73
APBA2-209	ENST00000559709	SRP68	Q9UHB9	627 aa	Known RBP	32.11	■■■□□ 2.73
APBA2-209	ENST00000559709	SIPA1L3	O60292	1781 aa	Predicted RBP	32.11	■■■□□ 2.73
APBA2-209	ENST00000559709	HEG1	Q9ULI3	1381 aa		32.1	■■■□□ 2.73
APBA2-209	ENST00000559709	SOS1	Q07889	1333 aa	Predicted RBP	32.1	■■■□□ 2.73
APBA2-209	ENST00000559709	KCNQ3	O43525	872 aa		32.1	■■■□□ 2.73
APBA2-209	ENST00000559709	ZBTB1	Q9Y2K1	713 aa		32.1	■■■□□ 2.73
APBA2-209	ENST00000559709	USP42	Q9H9J4	1324 aa	Known RBP	32.09	■■■□□ 2.73
APBA2-209	ENST00000559709	PELP1	Q8IZL8	1130 aa	Known RBP	32.09	■■■□□ 2.73
APBA2-209	ENST00000559709	FMNL2	Q96PY5	1086 aa		32.08	■■■□□ 2.73
APBA2-209	ENST00000559709	PNN	Q9H307	717 aa	Known RBP	32.08	■■■□□ 2.73
APBA2-209	ENST00000559709	STARD3NL	O95772	234 aa		32.07	■■■□□ 2.72
APBA2-209	ENST00000559709	C4A	P0C0L4	1744 aa		32.06	■■■□□ 2.72
APBA2-209	ENST00000559709	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.06	■■■□□ 2.72
APBA2-209	ENST00000559709	FKBP8	Q14318	412 aa		32.05	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms