RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 SPC24Q8NBT2 197 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 SH3GL3Q99963 347 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ANTXR1Q9H6X2 564 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ZNF521Q96K83 1311 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 CFAP74Q9C0B2 1584 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 TARBP1Q13395 1621 aaKnown RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 WDR7Q9Y4E6 1490 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 PLIN1O60240 522 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ZRANB2O95218 330 aaKnown RBP eCLIP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 SLFNL1Q499Z3 407 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 MCTP2Q6DN12 878 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 GBP6Q6ZN66 633 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 DHX37Q8IY37 1157 aaKnown RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 EFCAB13Q8IY85 973 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 CTCFLQ8NI51 663 aaPredicted RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 RSRC1Q96IZ7 334 aaKnown RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 API5Q9BZZ5 524 aaKnown RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 SPATS2LQ9NUQ6 558 aaKnown RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 DONSONQ9NYP3 566 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 SPAG9O60271 1321 aaKnown RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ASXL2Q76L83 1435 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 TRPM2O94759 1503 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 PREX2Q70Z35 1606 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 PSMD7P51665 324 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 SLMAPQ14BN4 828 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 SH2D4BQ5SQS7 431 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 KLHL10Q6JEL2 608 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 TBC1D22AQ8WUA7 517 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 PIBF1Q8WXW3 757 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ANAPC4Q9UJX5 808 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ADAMTS8Q9UP79 889 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 IQGAP1P46940 1657 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 SBNO2Q9Y2G9 1366 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 PPFIA3O75145 1194 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 GSDMDP57764 484 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 IFFO1Q0D2I5 559 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 WWC2Q6AWC2 1192 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ITPRIPQ8IWB1 547 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 RNF168Q8IYW5 571 aaPredicted RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 RGS22Q8NE09 1264 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ERO1AQ96HE7 468 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 NUCKS1Q9H1E3 243 aaKnown RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 IFT57Q9NWB7 429 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ITGB1BP2Q9UKP3 347 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 PPP1R12AO14974 1030 aaPredicted RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 LUC7L3O95232 432 aaKnown RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 EZRP15311 586 aaKnown RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 HNRNPMP52272 730 aaKnown RBP eCLIP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 IRX5P78411 483 aaPredicted RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 NOLC1Q14978 699 aaKnown RBP eCLIP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 TNPO1Q92973 898 aaKnown RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 CCDC34Q96HJ3 373 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 MED4Q9NPJ6 270 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 PRG4Q92954 1404 aaPredicted RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 CBFA2T2O43439 604 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ZNF592Q92610 1267 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ARHGAP45Q92619 1136 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 RAD50Q92878 1312 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ANKRD36BQ8N2N9 1353 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ZFYVE9O95405 1425 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 SAMD9LQ8IVG5 1584 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ABCA9Q8IUA7 1624 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 CDC42BPAQ5VT25 1732 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ARHGAP5Q13017 1502 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 A2MP01023 1474 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ELP1O95163 1332 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 RPGRIP1LQ68CZ1 1315 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 WDR33Q9C0J8 1336 aaKnown RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 FYB1O15117 783 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 SMC2O95347 1197 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 NBPF7P0C2Y1 421 aaPredicted RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 CCDC192P0DO97 292 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 NLRP5P59047 1200 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 MUM1L1Q5H9M0 696 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 CCDC183Q5T5S1 534 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 CDCA7LQ96GN5 454 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 RUFY1Q96T51 708 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 MAGI2Q86UL8 1455 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 RTEL1-TNFRSF6BF6WH68 1400 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 SSH2Q76I76 1423 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ARHGAP25P42331 645 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 B4GALNT4Q76KP1 1039 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 PLCD3Q8N3E9 789 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 KIF18AQ8NI77 898 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 TCP11Q8WWU5 503 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 TCHPQ9BT92 498 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 COG6Q9Y2V7 657 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 SPHKAPQ2M3C7 1700 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 MYO5CQ9NQX4 1742 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 MADDQ8WXG6 1647 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 SETBP1Q9Y6X0 1596 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 TRAPPC8Q9Y2L5 1435 aa2.79□□□□□ -1.96
RGPD1-204ENST00000559485 ERICH4A6NGS2 130 aa2.79□□□□□ -1.96
RGPD1-204ENST00000559485 SLC8A1P32418 973 aa2.79□□□□□ -1.96
RGPD1-204ENST00000559485 LZICQ8WZA0 190 aa2.79□□□□□ -1.96
RGPD1-204ENST00000559485 CEP89Q96ST8 783 aa2.79□□□□□ -1.96
RGPD1-204ENST00000559485 RABEP2Q9H5N1 569 aa2.79□□□□□ -1.96
RGPD1-204ENST00000559485 CLIP2Q9UDT6 1046 aa2.79□□□□□ -1.96
RGPD1-204ENST00000559485 NLRP1Q9C000 1473 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms