RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 ERVV-2B6SEH9 535 aa20.91■□□□□ 0.94
IRF9-204ENST00000559229 ITPK1Q13572 414 aa20.91■□□□□ 0.94
IRF9-204ENST00000559229 SMIM5Q71RC9 77 aa20.91■□□□□ 0.94
IRF9-204ENST00000559229 HSP90AB1P08238 724 aaKnown RBP20.9■□□□□ 0.94
IRF9-204ENST00000559229 PLEKHO1Q53GL0 409 aaPredicted RBP20.9■□□□□ 0.94
IRF9-204ENST00000559229 MORC1Q86VD1 984 aa20.9■□□□□ 0.94
IRF9-204ENST00000559229 DCAF5Q96JK2 942 aa20.89■□□□□ 0.93
IRF9-204ENST00000559229 GNPATO15228 680 aa20.88■□□□□ 0.93
IRF9-204ENST00000559229 AMOTQ4VCS5 1084 aa20.88■□□□□ 0.93
IRF9-204ENST00000559229 CEP350Q5VT06 3117 aa20.88■□□□□ 0.93
IRF9-204ENST00000559229 KNSTRNQ9Y448 316 aa20.87■□□□□ 0.93
IRF9-204ENST00000559229 GIGYF1O75420 1035 aaPredicted RBP20.86■□□□□ 0.93
IRF9-204ENST00000559229 ZNF530Q6P9A1 599 aaPredicted RBP20.85■□□□□ 0.93
IRF9-204ENST00000559229 UBR3Q6ZT12 1888 aa20.85■□□□□ 0.93
IRF9-204ENST00000559229 SLC4A9Q96Q91 983 aa20.84■□□□□ 0.93
IRF9-204ENST00000559229 KDRP35968 1356 aa20.84■□□□□ 0.93
IRF9-204ENST00000559229 CABP4P57796 275 aa20.83■□□□□ 0.93
IRF9-204ENST00000559229 RC3H1Q5TC82 1133 aaKnown RBP20.83■□□□□ 0.93
IRF9-204ENST00000559229 AEBP1Q8IUX7 1158 aa20.83■□□□□ 0.93
IRF9-204ENST00000559229 RBM42Q9BTD8 480 aaKnown RBP20.83■□□□□ 0.93
IRF9-204ENST00000559229 RTCBQ9Y3I0 505 aaKnown RBP20.83■□□□□ 0.93
IRF9-204ENST00000559229 MTHFSP49914 203 aa20.82■□□□□ 0.92
IRF9-204ENST00000559229 TRAPPC3LQ5T215 181 aa20.82■□□□□ 0.92
IRF9-204ENST00000559229 C1orf141Q5JVX7 400 aa20.81■□□□□ 0.92
IRF9-204ENST00000559229 SULT6B1Q6IMI4 303 aa20.81■□□□□ 0.92
IRF9-204ENST00000559229 KDM6AO15550 1401 aaPredicted RBP20.8■□□□□ 0.92
IRF9-204ENST00000559229 IL13P35225 146 aa20.8■□□□□ 0.92
IRF9-204ENST00000559229 AMER1Q5JTC6 1135 aaPredicted RBP20.8■□□□□ 0.92
IRF9-204ENST00000559229 MMP10P09238 476 aa20.79■□□□□ 0.92
IRF9-204ENST00000559229 ADRA2BP18089 450 aa20.79■□□□□ 0.92
IRF9-204ENST00000559229 NLGN1Q8N2Q7 840 aa20.79■□□□□ 0.92
IRF9-204ENST00000559229 CNTNAP4Q9C0A0 1308 aa20.78■□□□□ 0.92
IRF9-204ENST00000559229 RPS6KA4O75676 772 aa20.78■□□□□ 0.92
IRF9-204ENST00000559229 NFATC2IPQ8NCF5 419 aa20.78■□□□□ 0.92
IRF9-204ENST00000559229 ARHGEF1Q92888 912 aaKnown RBP20.78■□□□□ 0.92
IRF9-204ENST00000559229 ZNF831Q5JPB2 1677 aa20.76■□□□□ 0.91
IRF9-204ENST00000559229 KIF7Q2M1P5 1343 aa20.76■□□□□ 0.91
IRF9-204ENST00000559229 PTCD1O75127 700 aaKnown RBP20.75■□□□□ 0.91
IRF9-204ENST00000559229 RFC4P35249 363 aa20.75■□□□□ 0.91
IRF9-204ENST00000559229 GYS1P13807 737 aa20.74■□□□□ 0.91
IRF9-204ENST00000559229 TGFB2P61812 414 aa20.74■□□□□ 0.91
IRF9-204ENST00000559229 ATP10DQ9P241 1426 aa20.74■□□□□ 0.91
IRF9-204ENST00000559229 WWC3Q9ULE0 1092 aa20.74■□□□□ 0.91
IRF9-204ENST00000559229 AKAP4Q5JQC9 854 aa20.73■□□□□ 0.91
IRF9-204ENST00000559229 PER1O15534 1290 aaPredicted RBP20.72■□□□□ 0.91
IRF9-204ENST00000559229 ADCY9O60503 1353 aa20.72■□□□□ 0.91
IRF9-204ENST00000559229 CRKLP46109 303 aaKnown RBP20.71■□□□□ 0.91
IRF9-204ENST00000559229 GPBP1L1Q9HC44 474 aaPredicted RBP20.7■□□□□ 0.9
IRF9-204ENST00000559229 CCDC87Q9NVE4 849 aa20.7■□□□□ 0.9
IRF9-204ENST00000559229 SLC52A2Q9HAB3 445 aa20.69■□□□□ 0.9
IRF9-204ENST00000559229 LGR6Q9HBX8 967 aa20.69■□□□□ 0.9
IRF9-204ENST00000559229 PARP3Q9Y6F1 533 aa20.69■□□□□ 0.9
IRF9-204ENST00000559229 PXDNLA1KZ92 1463 aa20.69■□□□□ 0.9
IRF9-204ENST00000559229 COL5A3P25940 1745 aaPredicted RBP20.68■□□□□ 0.9
IRF9-204ENST00000559229 A0A0G2JLW4 131 aa20.68■□□□□ 0.9
IRF9-204ENST00000559229 HMOX1P09601 288 aa20.67■□□□□ 0.9
IRF9-204ENST00000559229 C10orf71Q711Q0 1435 aa20.67■□□□□ 0.9
IRF9-204ENST00000559229 CICQ96RK0 1608 aaPredicted RBP20.67■□□□□ 0.9
IRF9-204ENST00000559229 RNMTO43148 476 aaKnown RBP20.66■□□□□ 0.9
IRF9-204ENST00000559229 DIAPH1O60610 1272 aaKnown RBP20.66■□□□□ 0.9
IRF9-204ENST00000559229 CC2D1BQ5T0F9 858 aaKnown RBP20.66■□□□□ 0.9
IRF9-204ENST00000559229 INTS5Q6P9B9 1019 aaKnown RBP20.66■□□□□ 0.9
IRF9-204ENST00000559229 MYH14Q7Z406 1995 aaKnown RBP20.65■□□□□ 0.9
IRF9-204ENST00000559229 USP42Q9H9J4 1324 aaKnown RBP20.65■□□□□ 0.9
IRF9-204ENST00000559229 BCS1LQ9Y276 419 aa20.65■□□□□ 0.9
IRF9-204ENST00000559229 DPEP1P16444 411 aa20.64■□□□□ 0.89
IRF9-204ENST00000559229 FKBP8Q14318 412 aa20.64■□□□□ 0.89
IRF9-204ENST00000559229 MTHFSDQ2M296 383 aaKnown RBP20.64■□□□□ 0.89
IRF9-204ENST00000559229 ZNF526Q8TF50 670 aaPredicted RBP20.64■□□□□ 0.89
IRF9-204ENST00000559229 SRP68Q9UHB9 627 aaKnown RBP20.64■□□□□ 0.89
IRF9-204ENST00000559229 KIF13BQ9NQT8 1826 aa20.63■□□□□ 0.89
IRF9-204ENST00000559229 DNAJC10Q8IXB1 793 aa20.63■□□□□ 0.89
IRF9-204ENST00000559229 KCNA3P22001 575 aa20.62■□□□□ 0.89
IRF9-204ENST00000559229 SLC39A6Q13433 755 aa20.62■□□□□ 0.89
IRF9-204ENST00000559229 SCN11AQ9UI33 1791 aa20.62■□□□□ 0.89
IRF9-204ENST00000559229 C4AP0C0L4 1744 aa20.61■□□□□ 0.89
IRF9-204ENST00000559229 NPC1L1Q9UHC9 1359 aa20.61■□□□□ 0.89
IRF9-204ENST00000559229 FCHSD2O94868 740 aa20.61■□□□□ 0.89
IRF9-204ENST00000559229 CYP19A1P11511 503 aaPredicted RBP20.61■□□□□ 0.89
IRF9-204ENST00000559229 ZPR1O75312 459 aa20.6■□□□□ 0.89
IRF9-204ENST00000559229 TM4SF1P30408 202 aa20.6■□□□□ 0.89
IRF9-204ENST00000559229 DDR1Q08345 913 aa20.6■□□□□ 0.89
IRF9-204ENST00000559229 ARHGAP27Q6ZUM4 889 aa20.6■□□□□ 0.89
IRF9-204ENST00000559229 SOS1Q07889 1333 aaPredicted RBP20.59■□□□□ 0.89
IRF9-204ENST00000559229 KIAA1551Q9HCM1 1747 aa20.59■□□□□ 0.89
IRF9-204ENST00000559229 MRC1P22897 1456 aa20.59■□□□□ 0.89
IRF9-204ENST00000559229 VSIG10Q8N0Z9 540 aa20.59■□□□□ 0.89
IRF9-204ENST00000559229 PIM2Q9P1W9 311 aa20.59■□□□□ 0.89
IRF9-204ENST00000559229 TJP1Q07157 1748 aa20.58■□□□□ 0.89
IRF9-204ENST00000559229 N4BP2Q86UW6 1770 aaPredicted RBP20.57■□□□□ 0.88
IRF9-204ENST00000559229 POLRMTO00411 1230 aaKnown RBP20.57■□□□□ 0.88
IRF9-204ENST00000559229 HSPA6P17066 643 aa20.57■□□□□ 0.88
IRF9-204ENST00000559229 USPL1Q5W0Q7 1092 aa20.57■□□□□ 0.88
IRF9-204ENST00000559229 KIF3CO14782 793 aa20.56■□□□□ 0.88
IRF9-204ENST00000559229 NARFQ9UHQ1 456 aa20.56■□□□□ 0.88
IRF9-204ENST00000559229 U2SURPO15042 1029 aaKnown RBP20.55■□□□□ 0.88
IRF9-204ENST00000559229 DALRD3Q5D0E6 543 aaKnown RBP20.55■□□□□ 0.88
IRF9-204ENST00000559229 ZBTB1Q9Y2K1 713 aa20.55■□□□□ 0.88
IRF9-204ENST00000559229 KCPQ6ZWJ8 1503 aa20.54■□□□□ 0.88
IRF9-204ENST00000559229 GAS2L2Q8NHY3 880 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms