RNA–Protein interactions for RNA: ENST00000559064.1

SEMA6D-211, Transcript of semaphorin 6D, humanhuman

TSL 3

Gene SEMA6D, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-211ENST00000559064 DEPDC4Q8N2C3 294 aa10.37□□□□□ -0.75
SEMA6D-211ENST00000559064 GAS2L1Q99501 681 aaPredicted RBP10.37□□□□□ -0.75
SEMA6D-211ENST00000559064 USP17L3A6NCW0 530 aa10.36□□□□□ -0.75
SEMA6D-211ENST00000559064 USP17L4A6NCW7 530 aa10.36□□□□□ -0.75
SEMA6D-211ENST00000559064 LCE2CQ5TA81 110 aa10.36□□□□□ -0.75
SEMA6D-211ENST00000559064 USP17L2Q6R6M4 530 aa10.36□□□□□ -0.75
SEMA6D-211ENST00000559064 USP17L1Q7RTZ2 530 aa10.36□□□□□ -0.75
SEMA6D-211ENST00000559064 VWA5B2Q8N398 1253 aa10.36□□□□□ -0.75
SEMA6D-211ENST00000559064 RHBDD1Q8TEB9 315 aa10.36□□□□□ -0.75
SEMA6D-211ENST00000559064 RBM19Q9Y4C8 960 aaKnown RBP10.36□□□□□ -0.75
SEMA6D-211ENST00000559064 HRH3Q9Y5N1 445 aa10.36□□□□□ -0.75
SEMA6D-211ENST00000559064 FAM181BA6NEQ2 426 aa10.35□□□□□ -0.75
SEMA6D-211ENST00000559064 SCNN1DP51172 638 aa10.35□□□□□ -0.75
SEMA6D-211ENST00000559064 TBC1D9Q6ZT07 1266 aa10.35□□□□□ -0.75
SEMA6D-211ENST00000559064 FHDC1Q9C0D6 1143 aaPredicted RBP10.35□□□□□ -0.75
SEMA6D-211ENST00000559064 A0A1B0GTH6 734 aa10.34□□□□□ -0.75
SEMA6D-211ENST00000559064 F11P03951 625 aa10.34□□□□□ -0.75
SEMA6D-211ENST00000559064 SMTNP53814 917 aa10.34□□□□□ -0.75
SEMA6D-211ENST00000559064 PPARGC1BQ86YN6 1023 aaKnown RBP10.34□□□□□ -0.75
SEMA6D-211ENST00000559064 TRIM22Q8IYM9 498 aa10.34□□□□□ -0.75
SEMA6D-211ENST00000559064 UCN2Q96RP3 112 aa10.34□□□□□ -0.75
SEMA6D-211ENST00000559064 SERTAD1Q9UHV2 236 aa10.34□□□□□ -0.75
SEMA6D-211ENST00000559064 PCDHGA11Q9Y5H2 935 aa10.34□□□□□ -0.75
SEMA6D-211ENST00000559064 STAU1O95793 577 aaKnown RBP10.33□□□□□ -0.76
SEMA6D-211ENST00000559064 CSB-PGBD3P0DP91 1061 aa10.33□□□□□ -0.76
SEMA6D-211ENST00000559064 PHKA2P46019 1235 aa10.33□□□□□ -0.76
SEMA6D-211ENST00000559064 PGBD3Q8N328 593 aa10.33□□□□□ -0.76
SEMA6D-211ENST00000559064 TRERF1Q96PN7 1200 aa10.32□□□□□ -0.76
SEMA6D-211ENST00000559064 NIFKQ9BYG3 293 aaKnown RBP10.32□□□□□ -0.76
SEMA6D-211ENST00000559064 STK17AQ9UEE5 414 aa10.32□□□□□ -0.76
SEMA6D-211ENST00000559064 C4orf17Q53FE4 359 aa10.31□□□□□ -0.76
SEMA6D-211ENST00000559064 ZSCAN1Q8NBB4 408 aa10.31□□□□□ -0.76
SEMA6D-211ENST00000559064 A6NJY4 79 aa10.3□□□□□ -0.76
SEMA6D-211ENST00000559064 TMEM229AB2RXF0 380 aa10.3□□□□□ -0.76
SEMA6D-211ENST00000559064 SLC4A9Q96Q91 983 aa10.3□□□□□ -0.76
SEMA6D-211ENST00000559064 COL25A1Q9BXS0 654 aaPredicted RBP10.3□□□□□ -0.76
SEMA6D-211ENST00000559064 DNAAF2Q9NVR5 837 aaKnown RBP10.3□□□□□ -0.76
SEMA6D-211ENST00000559064 TFIP11Q9UBB9 837 aaKnown RBP10.3□□□□□ -0.76
SEMA6D-211ENST00000559064 MKRN1Q9UHC7 482 aaKnown RBP10.3□□□□□ -0.76
SEMA6D-211ENST00000559064 PALM3A6NDB9 673 aaPredicted RBP10.29□□□□□ -0.76
SEMA6D-211ENST00000559064 LARGE2Q8N3Y3 721 aa10.29□□□□□ -0.76
SEMA6D-211ENST00000559064 NUCKS1Q9H1E3 243 aaKnown RBP10.29□□□□□ -0.76
SEMA6D-211ENST00000559064 GPAMQ9HCL2 828 aa10.29□□□□□ -0.76
SEMA6D-211ENST00000559064 GTF3C3Q9Y5Q9 886 aa10.29□□□□□ -0.76
SEMA6D-211ENST00000559064 CDK2AP1O14519 115 aa10.28□□□□□ -0.76
SEMA6D-211ENST00000559064 PLA2G4AP47712 749 aa10.28□□□□□ -0.76
SEMA6D-211ENST00000559064 NBPF1Q3BBV0 1214 aa10.28□□□□□ -0.76
SEMA6D-211ENST00000559064 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
SEMA6D-211ENST00000559064 GPR161Q8N6U8 529 aaKnown RBP10.28□□□□□ -0.76
SEMA6D-211ENST00000559064 TPCN2Q8NHX9 752 aa10.28□□□□□ -0.76
SEMA6D-211ENST00000559064 ZNF837Q96EG3 531 aaPredicted RBP10.28□□□□□ -0.76
SEMA6D-211ENST00000559064 CNTNAP3BQ96NU0 1288 aa10.28□□□□□ -0.76
SEMA6D-211ENST00000559064 CNTNAP3Q9BZ76 1288 aa10.28□□□□□ -0.76
SEMA6D-211ENST00000559064 PPP1R12CQ9BZL4 782 aa10.28□□□□□ -0.76
SEMA6D-211ENST00000559064 MAFBQ9Y5Q3 323 aaPredicted RBP10.28□□□□□ -0.76
SEMA6D-211ENST00000559064 LBRQ14739 615 aaKnown RBP10.27□□□□□ -0.77
SEMA6D-211ENST00000559064 EFHC2Q5JST6 749 aa10.27□□□□□ -0.77
SEMA6D-211ENST00000559064 CCDC102BQ68D86 513 aa10.27□□□□□ -0.77
SEMA6D-211ENST00000559064 C1orf216Q8TAB5 229 aa10.27□□□□□ -0.77
SEMA6D-211ENST00000559064 ZNF358Q9NW07 568 aa10.27□□□□□ -0.77
SEMA6D-211ENST00000559064 CUEDC1Q9NWM3 386 aaPredicted RBP10.27□□□□□ -0.77
SEMA6D-211ENST00000559064 ZNF777Q9ULD5 760 aaPredicted RBP10.27□□□□□ -0.77
SEMA6D-211ENST00000559064 MTFR1Q15390 333 aa10.26□□□□□ -0.77
SEMA6D-211ENST00000559064 LARP1Q6PKG0 1096 aaKnown RBP10.26□□□□□ -0.77
SEMA6D-211ENST00000559064 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.26□□□□□ -0.77
SEMA6D-211ENST00000559064 AIDAQ96BJ3 306 aa10.26□□□□□ -0.77
SEMA6D-211ENST00000559064 CABP1Q9NZU7 370 aa10.26□□□□□ -0.77
SEMA6D-211ENST00000559064 CHMP3Q9Y3E7 222 aa10.26□□□□□ -0.77
SEMA6D-211ENST00000559064 TATP17735 454 aaPredicted RBP10.25□□□□□ -0.77
SEMA6D-211ENST00000559064 RASA1P20936 1047 aa10.25□□□□□ -0.77
SEMA6D-211ENST00000559064 MSX1P28360 303 aa10.25□□□□□ -0.77
SEMA6D-211ENST00000559064 DBN1Q16643 649 aa10.25□□□□□ -0.77
SEMA6D-211ENST00000559064 GTPBP3Q969Y2 492 aaKnown RBP10.25□□□□□ -0.77
SEMA6D-211ENST00000559064 NSFL1CQ9UNZ2 370 aaKnown RBP10.25□□□□□ -0.77
SEMA6D-211ENST00000559064 PHF24Q9UPV7 400 aa10.25□□□□□ -0.77
SEMA6D-211ENST00000559064 CLDN10P78369 228 aa10.24□□□□□ -0.77
SEMA6D-211ENST00000559064 ZNF594Q96JF6 807 aaPredicted RBP10.24□□□□□ -0.77
SEMA6D-211ENST00000559064 ZMYND15Q9H091 742 aa10.24□□□□□ -0.77
SEMA6D-211ENST00000559064 LMOD1P29536 600 aaPredicted RBP10.23□□□□□ -0.77
SEMA6D-211ENST00000559064 SIX5Q8N196 739 aa10.23□□□□□ -0.77
SEMA6D-211ENST00000559064 SCHIP1Q9P0W5 487 aaPredicted RBP10.23□□□□□ -0.77
SEMA6D-211ENST00000559064 RUBCNLQ9H714 662 aa10.22□□□□□ -0.77
SEMA6D-211ENST00000559064 VRTNQ9H8Y1 702 aa10.22□□□□□ -0.77
SEMA6D-211ENST00000559064 MBIPQ9NS73 344 aa10.22□□□□□ -0.77
SEMA6D-211ENST00000559064 M0R2N6 131 aa10.21□□□□□ -0.77
SEMA6D-211ENST00000559064 KRT76Q01546 638 aa10.21□□□□□ -0.77
SEMA6D-211ENST00000559064 SRSF11Q05519 484 aaKnown RBP10.21□□□□□ -0.77
SEMA6D-211ENST00000559064 RNFT1Q5M7Z0 435 aa10.21□□□□□ -0.77
SEMA6D-211ENST00000559064 FIGNL1Q6PIW4 674 aa10.21□□□□□ -0.77
SEMA6D-211ENST00000559064 ZDHHC3Q9NYG2 299 aa10.21□□□□□ -0.77
SEMA6D-211ENST00000559064 IQSEC3Q9UPP2 1182 aaPredicted RBP10.21□□□□□ -0.77
SEMA6D-211ENST00000559064 KIAA1024Q9UPX6 916 aa10.21□□□□□ -0.77
SEMA6D-211ENST00000559064 GPR25O00155 361 aa10.2□□□□□ -0.78
SEMA6D-211ENST00000559064 ZBTB7BO15156 539 aaPredicted RBP10.2□□□□□ -0.78
SEMA6D-211ENST00000559064 ARSJQ5FYB0 599 aaPredicted RBP10.2□□□□□ -0.78
SEMA6D-211ENST00000559064 CRISPLD1Q9H336 500 aa10.2□□□□□ -0.78
SEMA6D-211ENST00000559064 ZNF232Q9UNY5 417 aa10.2□□□□□ -0.78
SEMA6D-211ENST00000559064 GJA3Q9Y6H8 435 aa10.2□□□□□ -0.78
SEMA6D-211ENST00000559064 SEC13P55735 322 aa10.19□□□□□ -0.78
SEMA6D-211ENST00000559064 SLC9A9Q8IVB4 645 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms