RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 AKAP4Q5JQC9 854 aa28.92■■■□□ 2.22
CRNDE-205ENST00000558952 COL3A1P02461 1466 aaPredicted RBP28.91■■■□□ 2.22
CRNDE-205ENST00000558952 COL23A1Q86Y22 540 aaPredicted RBP28.91■■■□□ 2.22
CRNDE-205ENST00000558952 FHDC1Q9C0D6 1143 aaPredicted RBP28.9■■■□□ 2.22
CRNDE-205ENST00000558952 RBM42Q9BTD8 480 aaKnown RBP28.88■■■□□ 2.21
CRNDE-205ENST00000558952 LINC00116Q8NCU8 138 aa28.87■■■□□ 2.21
CRNDE-205ENST00000558952 NFATC2IPQ8NCF5 419 aa28.86■■■□□ 2.21
CRNDE-205ENST00000558952 SYT17Q9BSW7 474 aa28.86■■■□□ 2.21
CRNDE-205ENST00000558952 ITPK1Q13572 414 aa28.85■■■□□ 2.21
CRNDE-205ENST00000558952 PHF14O94880 888 aa28.84■■■□□ 2.21
CRNDE-205ENST00000558952 PPP2R1AP30153 589 aa28.84■■■□□ 2.21
CRNDE-205ENST00000558952 MTHFSDQ2M296 383 aaKnown RBP28.84■■■□□ 2.21
CRNDE-205ENST00000558952 KLHL34Q8N239 644 aa28.83■■■□□ 2.21
CRNDE-205ENST00000558952 NUDCQ9Y266 331 aa28.83■■■□□ 2.21
CRNDE-205ENST00000558952 SSFA2P28290 1259 aa28.82■■■□□ 2.2
CRNDE-205ENST00000558952 COL24A1Q17RW2 1714 aa28.82■■■□□ 2.2
CRNDE-205ENST00000558952 SCN11AQ9UI33 1791 aa28.82■■■□□ 2.2
CRNDE-205ENST00000558952 MAP3K5Q99683 1374 aa28.81■■■□□ 2.2
CRNDE-205ENST00000558952 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.81■■■□□ 2.2
CRNDE-205ENST00000558952 GNPATO15228 680 aa28.81■■■□□ 2.2
CRNDE-205ENST00000558952 MSL1Q68DK7 614 aa28.81■■■□□ 2.2
CRNDE-205ENST00000558952 SLC52A2Q9HAB3 445 aa28.8■■■□□ 2.2
CRNDE-205ENST00000558952 ZNF831Q5JPB2 1677 aa28.8■■■□□ 2.2
CRNDE-205ENST00000558952 RNMTO43148 476 aaKnown RBP28.79■■■□□ 2.2
CRNDE-205ENST00000558952 PTCD1O75127 700 aaKnown RBP28.79■■■□□ 2.2
CRNDE-205ENST00000558952 LGR6Q9HBX8 967 aa28.79■■■□□ 2.2
CRNDE-205ENST00000558952 UBR3Q6ZT12 1888 aa28.78■■■□□ 2.2
CRNDE-205ENST00000558952 GAS2L2Q8NHY3 880 aa28.78■■■□□ 2.2
CRNDE-205ENST00000558952 SLC4A9Q96Q91 983 aa28.78■■■□□ 2.2
CRNDE-205ENST00000558952 AMIGO3Q86WK7 504 aa28.77■■■□□ 2.2
CRNDE-205ENST00000558952 MRC1P22897 1456 aa28.75■■■□□ 2.19
CRNDE-205ENST00000558952 SMIM5Q71RC9 77 aa28.75■■■□□ 2.19
CRNDE-205ENST00000558952 RTCBQ9Y3I0 505 aaKnown RBP28.75■■■□□ 2.19
CRNDE-205ENST00000558952 U2AF1L5P0DN76 240 aaPredicted RBP28.74■■■□□ 2.19
CRNDE-205ENST00000558952 U2AF1Q01081 240 aaKnown RBP eCLIP28.74■■■□□ 2.19
CRNDE-205ENST00000558952 CNTNAP4Q9C0A0 1308 aa28.73■■■□□ 2.19
CRNDE-205ENST00000558952 PRKAR2BP31323 418 aa28.73■■■□□ 2.19
CRNDE-205ENST00000558952 RC3H1Q5TC82 1133 aaKnown RBP28.73■■■□□ 2.19
CRNDE-205ENST00000558952 GNAT3A8MTJ3 354 aa28.72■■■□□ 2.19
CRNDE-205ENST00000558952 RSPH6AQ9H0K4 717 aa28.72■■■□□ 2.19
CRNDE-205ENST00000558952 TRAPPC3LQ5T215 181 aa28.71■■■□□ 2.19
CRNDE-205ENST00000558952 COL5A3P25940 1745 aaPredicted RBP28.71■■■□□ 2.19
CRNDE-205ENST00000558952 ADAMTS7Q9UKP4 1686 aa28.7■■■□□ 2.19
CRNDE-205ENST00000558952 ADRA2BP18089 450 aa28.69■■■□□ 2.18
CRNDE-205ENST00000558952 TEFQ10587 303 aa28.68■■■□□ 2.18
CRNDE-205ENST00000558952 VIRMAQ69YN4 1812 aaKnown RBP28.68■■■□□ 2.18
CRNDE-205ENST00000558952 RPS6KA4O75676 772 aa28.67■■■□□ 2.18
CRNDE-205ENST00000558952 FCHSD2O94868 740 aa28.67■■■□□ 2.18
CRNDE-205ENST00000558952 SLC39A6Q13433 755 aa28.67■■■□□ 2.18
CRNDE-205ENST00000558952 CRKLP46109 303 aaKnown RBP28.66■■■□□ 2.18
CRNDE-205ENST00000558952 PHACTR3Q96KR7 559 aa28.66■■■□□ 2.18
CRNDE-205ENST00000558952 CICQ96RK0 1608 aaPredicted RBP28.65■■■□□ 2.18
CRNDE-205ENST00000558952 YY1P25490 414 aa28.65■■■□□ 2.18
CRNDE-205ENST00000558952 TTC5Q8N0Z6 440 aa28.65■■■□□ 2.18
CRNDE-205ENST00000558952 TJP1Q07157 1748 aa28.65■■■□□ 2.18
CRNDE-205ENST00000558952 RFC4P35249 363 aa28.64■■■□□ 2.18
CRNDE-205ENST00000558952 DDX10Q13206 875 aaKnown RBP28.64■■■□□ 2.18
CRNDE-205ENST00000558952 GPR162Q16538 588 aa28.64■■■□□ 2.18
CRNDE-205ENST00000558952 NLGN2Q8NFZ4 835 aa28.64■■■□□ 2.18
CRNDE-205ENST00000558952 ARHGEF1Q92888 912 aaKnown RBP28.64■■■□□ 2.18
CRNDE-205ENST00000558952 PELP1Q8IZL8 1130 aaKnown RBP28.63■■■□□ 2.17
CRNDE-205ENST00000558952 IL17REQ8NFR9 667 aa28.63■■■□□ 2.17
CRNDE-205ENST00000558952 NEFMP07197 916 aa28.62■■■□□ 2.17
CRNDE-205ENST00000558952 DNAJC10Q8IXB1 793 aa28.62■■■□□ 2.17
CRNDE-205ENST00000558952 CD2APQ9Y5K6 639 aa28.62■■■□□ 2.17
CRNDE-205ENST00000558952 KCPQ6ZWJ8 1503 aa28.61■■■□□ 2.17
CRNDE-205ENST00000558952 NLGN1Q8N2Q7 840 aa28.61■■■□□ 2.17
CRNDE-205ENST00000558952 RALBP1Q15311 655 aa28.6■■■□□ 2.17
CRNDE-205ENST00000558952 VSIG10Q8N0Z9 540 aa28.6■■■□□ 2.17
CRNDE-205ENST00000558952 RTF1Q92541 710 aaKnown RBP28.6■■■□□ 2.17
CRNDE-205ENST00000558952 CCDC87Q9NVE4 849 aa28.59■■■□□ 2.17
CRNDE-205ENST00000558952 MMP10P09238 476 aa28.57■■■□□ 2.16
CRNDE-205ENST00000558952 INTS5Q6P9B9 1019 aaKnown RBP28.57■■■□□ 2.16
CRNDE-205ENST00000558952 CEMIPQ8WUJ3 1361 aa28.57■■■□□ 2.16
CRNDE-205ENST00000558952 MYH14Q7Z406 1995 aaKnown RBP28.57■■■□□ 2.16
CRNDE-205ENST00000558952 CYP19A1P11511 503 aaPredicted RBP28.56■■■□□ 2.16
CRNDE-205ENST00000558952 ZNF790Q6PG37 636 aa28.56■■■□□ 2.16
CRNDE-205ENST00000558952 GYS1P13807 737 aa28.55■■■□□ 2.16
CRNDE-205ENST00000558952 UBR2Q8IWV8 1755 aa28.55■■■□□ 2.16
CRNDE-205ENST00000558952 C4AP0C0L4 1744 aa28.54■■■□□ 2.16
CRNDE-205ENST00000558952 BTBD11A6QL63 1104 aa28.53■■■□□ 2.16
CRNDE-205ENST00000558952 ZEB1P37275 1124 aaPredicted RBP28.53■■■□□ 2.16
CRNDE-205ENST00000558952 PNNQ9H307 717 aaKnown RBP28.53■■■□□ 2.16
CRNDE-205ENST00000558952 SIPA1L3O60292 1781 aaPredicted RBP28.52■■■□□ 2.16
CRNDE-205ENST00000558952 HTATSF1O43719 755 aaKnown RBP28.52■■■□□ 2.16
CRNDE-205ENST00000558952 STARD3NLO95772 234 aa28.52■■■□□ 2.16
CRNDE-205ENST00000558952 USP42Q9H9J4 1324 aaKnown RBP28.51■■■□□ 2.15
CRNDE-205ENST00000558952 MCM10Q7L590 875 aa28.51■■■□□ 2.15
CRNDE-205ENST00000558952 ZNF496Q96IT1 587 aaPredicted RBP28.51■■■□□ 2.15
CRNDE-205ENST00000558952 FMNL2Q96PY5 1086 aa28.51■■■□□ 2.15
CRNDE-205ENST00000558952 TEX13AQ9BXU3 409 aaPredicted RBP28.51■■■□□ 2.15
CRNDE-205ENST00000558952 HEG1Q9ULI3 1381 aa28.5■■■□□ 2.15
CRNDE-205ENST00000558952 SOS1Q07889 1333 aaPredicted RBP28.5■■■□□ 2.15
CRNDE-205ENST00000558952 ZPR1O75312 459 aa28.5■■■□□ 2.15
CRNDE-205ENST00000558952 SRP68Q9UHB9 627 aaKnown RBP28.5■■■□□ 2.15
CRNDE-205ENST00000558952 PARP3Q9Y6F1 533 aa28.5■■■□□ 2.15
CRNDE-205ENST00000558952 GRIN3BO60391 1043 aa28.49■■■□□ 2.15
CRNDE-205ENST00000558952 ZBTB1Q9Y2K1 713 aa28.49■■■□□ 2.15
CRNDE-205ENST00000558952 MYBBP1AQ9BQG0 1328 aaKnown RBP28.48■■■□□ 2.15
CRNDE-205ENST00000558952 MAPK8IP3Q9UPT6 1336 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms