RNA–Protein interactions for RNA: ENST00000558926.1

AP3S2-207, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 2

Gene AP3S2, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-207ENST00000558926 DCAF5Q96JK2 942 aa15.3■□□□□ 0.04
AP3S2-207ENST00000558926 UTRNP46939 3433 aa15.3■□□□□ 0.04
AP3S2-207ENST00000558926 DIAPH1O60610 1272 aaKnown RBP15.29■□□□□ 0.04
AP3S2-207ENST00000558926 AMIGO3Q86WK7 504 aa15.29■□□□□ 0.04
AP3S2-207ENST00000558926 ERVV-2B6SEH9 535 aa15.28■□□□□ 0.04
AP3S2-207ENST00000558926 U2SURPO15042 1029 aaKnown RBP15.28■□□□□ 0.04
AP3S2-207ENST00000558926 ITPK1Q13572 414 aa15.28■□□□□ 0.04
AP3S2-207ENST00000558926 UBR3Q6ZT12 1888 aa15.28■□□□□ 0.04
AP3S2-207ENST00000558926 KDM6AO15550 1401 aaPredicted RBP15.27■□□□□ 0.04
AP3S2-207ENST00000558926 GOLGB1Q14789 3259 aaKnown RBP15.27■□□□□ 0.04
AP3S2-207ENST00000558926 VIRMAQ69YN4 1812 aaKnown RBP15.27■□□□□ 0.04
AP3S2-207ENST00000558926 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.27■□□□□ 0.04
AP3S2-207ENST00000558926 GNPATO15228 680 aa15.27■□□□□ 0.04
AP3S2-207ENST00000558926 PTCD1O75127 700 aaKnown RBP15.27■□□□□ 0.04
AP3S2-207ENST00000558926 NFATC2IPQ8NCF5 419 aa15.27■□□□□ 0.04
AP3S2-207ENST00000558926 HMGB2P26583 209 aaKnown RBP15.26■□□□□ 0.03
AP3S2-207ENST00000558926 GPR162Q16538 588 aa15.26■□□□□ 0.03
AP3S2-207ENST00000558926 FLAD1Q8NFF5 587 aa15.26■□□□□ 0.03
AP3S2-207ENST00000558926 KDRP35968 1356 aa15.25■□□□□ 0.03
AP3S2-207ENST00000558926 NLGN2Q8NFZ4 835 aa15.25■□□□□ 0.03
AP3S2-207ENST00000558926 SCN11AQ9UI33 1791 aa15.25■□□□□ 0.03
AP3S2-207ENST00000558926 COL24A1Q17RW2 1714 aa15.25■□□□□ 0.03
AP3S2-207ENST00000558926 LGR6Q9HBX8 967 aa15.24■□□□□ 0.03
AP3S2-207ENST00000558926 PLEKHG2Q9H7P9 1386 aa15.24■□□□□ 0.03
AP3S2-207ENST00000558926 AKAP4Q5JQC9 854 aa15.23■□□□□ 0.03
AP3S2-207ENST00000558926 SLC4A9Q96Q91 983 aa15.23■□□□□ 0.03
AP3S2-207ENST00000558926 MTHFSDQ2M296 383 aaKnown RBP15.22■□□□□ 0.03
AP3S2-207ENST00000558926 NPC1L1Q9UHC9 1359 aa15.22■□□□□ 0.03
AP3S2-207ENST00000558926 SSFA2P28290 1259 aa15.21■□□□□ 0.03
AP3S2-207ENST00000558926 CFAP53Q96M91 514 aa15.21■□□□□ 0.03
AP3S2-207ENST00000558926 WWC3Q9ULE0 1092 aa15.21■□□□□ 0.03
AP3S2-207ENST00000558926 RTCBQ9Y3I0 505 aaKnown RBP15.21■□□□□ 0.03
AP3S2-207ENST00000558926 CHD4Q14839 1912 aa15.21■□□□□ 0.02
AP3S2-207ENST00000558926 RNMTO43148 476 aaKnown RBP15.2■□□□□ 0.02
AP3S2-207ENST00000558926 SLC39A6Q13433 755 aa15.2■□□□□ 0.02
AP3S2-207ENST00000558926 MAP3K5Q99683 1374 aa15.2■□□□□ 0.02
AP3S2-207ENST00000558926 MYH14Q7Z406 1995 aaKnown RBP15.2■□□□□ 0.02
AP3S2-207ENST00000558926 TRAPPC3LQ5T215 181 aa15.19■□□□□ 0.02
AP3S2-207ENST00000558926 SLC52A2Q9HAB3 445 aa15.19■□□□□ 0.02
AP3S2-207ENST00000558926 COL5A3P25940 1745 aaPredicted RBP15.19■□□□□ 0.02
AP3S2-207ENST00000558926 COL3A1P02461 1466 aaPredicted RBP15.19■□□□□ 0.02
AP3S2-207ENST00000558926 PPP2R1AP30153 589 aa15.17■□□□□ 0.02
AP3S2-207ENST00000558926 RFC4P35249 363 aa15.17■□□□□ 0.02
AP3S2-207ENST00000558926 ARHGEF1Q92888 912 aaKnown RBP15.17■□□□□ 0.02
AP3S2-207ENST00000558926 MMP10P09238 476 aa15.16■□□□□ 0.02
AP3S2-207ENST00000558926 U2AF1L5P0DN76 240 aaPredicted RBP15.16■□□□□ 0.02
AP3S2-207ENST00000558926 CRKLP46109 303 aaKnown RBP15.16■□□□□ 0.02
AP3S2-207ENST00000558926 U2AF1Q01081 240 aaKnown RBP eCLIP15.16■□□□□ 0.02
AP3S2-207ENST00000558926 ZNF831Q5JPB2 1677 aa15.16■□□□□ 0.02
AP3S2-207ENST00000558926 TJP1Q07157 1748 aa15.15■□□□□ 0.02
AP3S2-207ENST00000558926 RPS6KA4O75676 772 aa15.15■□□□□ 0.02
AP3S2-207ENST00000558926 PRKAR2BP31323 418 aa15.15■□□□□ 0.02
AP3S2-207ENST00000558926 RC3H1Q5TC82 1133 aaKnown RBP15.15■□□□□ 0.02
AP3S2-207ENST00000558926 DNAJC10Q8IXB1 793 aa15.15■□□□□ 0.02
AP3S2-207ENST00000558926 NUDCQ9Y266 331 aa15.15■□□□□ 0.02
AP3S2-207ENST00000558926 CNTNAP4Q9C0A0 1308 aa15.15■□□□□ 0.02
AP3S2-207ENST00000558926 YBX3P16989 372 aaKnown RBP eCLIP15.14■□□□□ 0.01
AP3S2-207ENST00000558926 TEFQ10587 303 aa15.14■□□□□ 0.01
AP3S2-207ENST00000558926 GAS2L2Q8NHY3 880 aa15.14■□□□□ 0.01
AP3S2-207ENST00000558926 PHACTR3Q96KR7 559 aa15.14■□□□□ 0.01
AP3S2-207ENST00000558926 CD2APQ9Y5K6 639 aa15.14■□□□□ 0.01
AP3S2-207ENST00000558926 GNAT3A8MTJ3 354 aa15.13■□□□□ 0.01
AP3S2-207ENST00000558926 C4AP0C0L4 1744 aa15.13■□□□□ 0.01
AP3S2-207ENST00000558926 SRP68Q9UHB9 627 aaKnown RBP15.13■□□□□ 0.01
AP3S2-207ENST00000558926 TTC5Q8N0Z6 440 aa15.12■□□□□ 0.01
AP3S2-207ENST00000558926 IL17REQ8NFR9 667 aa15.12■□□□□ 0.01
AP3S2-207ENST00000558926 GYS1P13807 737 aa15.11■□□□□ 0.01
AP3S2-207ENST00000558926 ADRA2BP18089 450 aa15.11■□□□□ 0.01
AP3S2-207ENST00000558926 INTS5Q6P9B9 1019 aaKnown RBP15.11■□□□□ 0.01
AP3S2-207ENST00000558926 NLGN1Q8N2Q7 840 aa15.11■□□□□ 0.01
AP3S2-207ENST00000558926 RSPH6AQ9H0K4 717 aa15.11■□□□□ 0.01
AP3S2-207ENST00000558926 CCDC87Q9NVE4 849 aa15.11■□□□□ 0.01
AP3S2-207ENST00000558926 MRC1P22897 1456 aa15.1■□□□□ 0.01
AP3S2-207ENST00000558926 ZNF784Q8NCA9 323 aaPredicted RBP15.1■□□□□ 0.01
AP3S2-207ENST00000558926 PARP3Q9Y6F1 533 aa15.1■□□□□ 0.01
AP3S2-207ENST00000558926 N4BP2Q86UW6 1770 aaPredicted RBP15.1■□□□□ 0.01
AP3S2-207ENST00000558926 CICQ96RK0 1608 aaPredicted RBP15.1■□□□□ 0.01
AP3S2-207ENST00000558926 ADAMTS7Q9UKP4 1686 aa15.09■□□□□ 0.01
AP3S2-207ENST00000558926 KCPQ6ZWJ8 1503 aa15.09■□□□□ 0.01
AP3S2-207ENST00000558926 GRIN3BO60391 1043 aa15.09■□□□□ 0.01
AP3S2-207ENST00000558926 CYP19A1P11511 503 aaPredicted RBP15.09■□□□□ 0.01
AP3S2-207ENST00000558926 CANXP27824 592 aaKnown RBP15.09■□□□□ 0.01
AP3S2-207ENST00000558926 ZNF330Q9Y3S2 320 aaPredicted RBP15.09■□□□□ 0.01
AP3S2-207ENST00000558926 ZPR1O75312 459 aa15.08■□□□□ 0
AP3S2-207ENST00000558926 DDX10Q13206 875 aaKnown RBP15.08■□□□□ 0
AP3S2-207ENST00000558926 FKBP8Q14318 412 aa15.08■□□□□ 0
AP3S2-207ENST00000558926 SIPA1L3O60292 1781 aaPredicted RBP15.07■□□□□ 0
AP3S2-207ENST00000558926 UBR2Q8IWV8 1755 aa15.07■□□□□ 0
AP3S2-207ENST00000558926 A0A0G2JLW4 131 aa15.07■□□□□ 0
AP3S2-207ENST00000558926 DCTN1Q14203 1278 aa15.07■□□□□ 0
AP3S2-207ENST00000558926 USPL1Q5W0Q7 1092 aa15.07■□□□□ 0
AP3S2-207ENST00000558926 MCM10Q7L590 875 aa15.07■□□□□ 0
AP3S2-207ENST00000558926 RTF1Q92541 710 aaKnown RBP15.07■□□□□ 0
AP3S2-207ENST00000558926 ZNF496Q96IT1 587 aaPredicted RBP15.07■□□□□ 0
AP3S2-207ENST00000558926 ZBTB1Q9Y2K1 713 aa15.07■□□□□ 0
AP3S2-207ENST00000558926 BTBD11A6QL63 1104 aa15.06■□□□□ 0
AP3S2-207ENST00000558926 KCNQ3O43525 872 aa15.06■□□□□ 0
AP3S2-207ENST00000558926 FCHSD2O94868 740 aa15.06■□□□□ 0
AP3S2-207ENST00000558926 ZNF790Q6PG37 636 aa15.06■□□□□ 0
AP3S2-207ENST00000558926 USP42Q9H9J4 1324 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms