RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 UBR2Q8IWV8 1755 aa7.64□□□□□ -1.19
SMAD3-209ENST00000558894 IL13P35225 146 aa7.63□□□□□ -1.19
SMAD3-209ENST00000558894 ITPK1Q13572 414 aa7.63□□□□□ -1.19
SMAD3-209ENST00000558894 SMIM5Q71RC9 77 aa7.63□□□□□ -1.19
SMAD3-209ENST00000558894 IFNL2Q8IZJ0 200 aa7.63□□□□□ -1.19
SMAD3-209ENST00000558894 LINC00116Q8NCU8 138 aa7.63□□□□□ -1.19
SMAD3-209ENST00000558894 NLGN2Q8NFZ4 835 aa7.63□□□□□ -1.19
SMAD3-209ENST00000558894 ATG3Q9NT62 314 aa7.63□□□□□ -1.19
SMAD3-209ENST00000558894 ASAP1Q9ULH1 1129 aa7.63□□□□□ -1.19
SMAD3-209ENST00000558894 BRCA1P38398 1863 aaKnown RBP7.63□□□□□ -1.19
SMAD3-209ENST00000558894 MORC1Q86VD1 984 aa7.62□□□□□ -1.19
SMAD3-209ENST00000558894 SMARCC1Q92922 1105 aaPredicted RBP7.62□□□□□ -1.19
SMAD3-209ENST00000558894 MRC1P22897 1456 aa7.62□□□□□ -1.19
SMAD3-209ENST00000558894 N4BP2Q86UW6 1770 aaPredicted RBP7.61□□□□□ -1.19
SMAD3-209ENST00000558894 LOC102724428A0A0B4J2F2 783 aa7.61□□□□□ -1.19
SMAD3-209ENST00000558894 SIK1P57059 783 aa7.61□□□□□ -1.19
SMAD3-209ENST00000558894 TMOD3Q9NYL9 352 aa7.61□□□□□ -1.19
SMAD3-209ENST00000558894 ERVV-2B6SEH9 535 aa7.6□□□□□ -1.19
SMAD3-209ENST00000558894 DCAF5Q96JK2 942 aa7.6□□□□□ -1.19
SMAD3-209ENST00000558894 KNSTRNQ9Y448 316 aa7.6□□□□□ -1.19
SMAD3-209ENST00000558894 NPC1L1Q9UHC9 1359 aa7.59□□□□□ -1.19
SMAD3-209ENST00000558894 KCPQ6ZWJ8 1503 aa7.59□□□□□ -1.19
SMAD3-209ENST00000558894 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.59□□□□□ -1.19
SMAD3-209ENST00000558894 YBX3P16989 372 aaKnown RBP eCLIP7.59□□□□□ -1.196e-6■□□□□ 10.6
SMAD3-209ENST00000558894 POLD1P28340 1107 aa7.59□□□□□ -1.19
SMAD3-209ENST00000558894 MTHFSP49914 203 aa7.59□□□□□ -1.19
SMAD3-209ENST00000558894 PLEKHO1Q53GL0 409 aaPredicted RBP7.59□□□□□ -1.19
SMAD3-209ENST00000558894 MSL1Q68DK7 614 aa7.59□□□□□ -1.19
SMAD3-209ENST00000558894 SULT6B1Q6IMI4 303 aa7.59□□□□□ -1.19
SMAD3-209ENST00000558894 FLAD1Q8NFF5 587 aa7.59□□□□□ -1.19
SMAD3-209ENST00000558894 AFDNP55196 1824 aaKnown RBP7.59□□□□□ -1.19
SMAD3-209ENST00000558894 KCNA4P22459 653 aa7.58□□□□□ -1.2
SMAD3-209ENST00000558894 SSFA2P28290 1259 aa7.58□□□□□ -1.2
SMAD3-209ENST00000558894 ATP6V1AP38606 617 aa7.58□□□□□ -1.2
SMAD3-209ENST00000558894 AMOTQ4VCS5 1084 aa7.58□□□□□ -1.2
SMAD3-209ENST00000558894 ZNF530Q6P9A1 599 aaPredicted RBP7.58□□□□□ -1.2
SMAD3-209ENST00000558894 ARFGEF1Q9Y6D6 1849 aa7.57□□□□□ -1.2
SMAD3-209ENST00000558894 DLG5Q8TDM6 1919 aa7.57□□□□□ -1.2
SMAD3-209ENST00000558894 DCAF8L1A6NGE4 600 aa7.57□□□□□ -1.2
SMAD3-209ENST00000558894 MSH5O43196 834 aa7.57□□□□□ -1.2
SMAD3-209ENST00000558894 PHF14O94880 888 aa7.57□□□□□ -1.2
SMAD3-209ENST00000558894 HSP90AB1P08238 724 aaKnown RBP7.57□□□□□ -1.2
SMAD3-209ENST00000558894 NFATC2IPQ8NCF5 419 aa7.57□□□□□ -1.2
SMAD3-209ENST00000558894 AK7Q96M32 723 aa7.57□□□□□ -1.2
SMAD3-209ENST00000558894 LGR6Q9HBX8 967 aa7.57□□□□□ -1.2
SMAD3-209ENST00000558894 CD2APQ9Y5K6 639 aa7.57□□□□□ -1.2
SMAD3-209ENST00000558894 NRXN2Q9P2S2 1712 aa7.57□□□□□ -1.2
SMAD3-209ENST00000558894 DLEC1Q9Y238 1755 aa7.56□□□□□ -1.2
SMAD3-209ENST00000558894 CNTNAP4Q9C0A0 1308 aa7.56□□□□□ -1.2
SMAD3-209ENST00000558894 GNPATO15228 680 aa7.56□□□□□ -1.2
SMAD3-209ENST00000558894 MTHFSDQ2M296 383 aaKnown RBP7.56□□□□□ -1.2
SMAD3-209ENST00000558894 CC2D1BQ5T0F9 858 aaKnown RBP7.56□□□□□ -1.2
SMAD3-209ENST00000558894 RC3H1Q5TC82 1133 aaKnown RBP7.56□□□□□ -1.2
SMAD3-209ENST00000558894 RPS6KA4O75676 772 aa7.55□□□□□ -1.2
SMAD3-209ENST00000558894 HMOX1P09601 288 aa7.55□□□□□ -1.2
SMAD3-209ENST00000558894 HMGB2P26583 209 aaKnown RBP7.55□□□□□ -1.2
SMAD3-209ENST00000558894 CABP4P57796 275 aa7.55□□□□□ -1.2
SMAD3-209ENST00000558894 GPR162Q16538 588 aa7.55□□□□□ -1.2
SMAD3-209ENST00000558894 AKAP4Q5JQC9 854 aa7.55□□□□□ -1.2
SMAD3-209ENST00000558894 POTEDQ86YR6 584 aa7.55□□□□□ -1.2
SMAD3-209ENST00000558894 KLHL34Q8N239 644 aa7.55□□□□□ -1.2
SMAD3-209ENST00000558894 ARHGEF1Q92888 912 aaKnown RBP7.55□□□□□ -1.2
SMAD3-209ENST00000558894 PXDNLA1KZ92 1463 aa7.55□□□□□ -1.2
SMAD3-209ENST00000558894 C10orf71Q711Q0 1435 aa7.54□□□□□ -1.2
SMAD3-209ENST00000558894 SBF1O95248 1867 aa7.54□□□□□ -1.2
SMAD3-209ENST00000558894 RNMTO43148 476 aaKnown RBP7.54□□□□□ -1.2
SMAD3-209ENST00000558894 DIAPH1O60610 1272 aaKnown RBP7.54□□□□□ -1.2
SMAD3-209ENST00000558894 CAPN15O75808 1086 aa7.54□□□□□ -1.2
SMAD3-209ENST00000558894 GYS1P13807 737 aa7.54□□□□□ -1.2
SMAD3-209ENST00000558894 INTS5Q6P9B9 1019 aaKnown RBP7.54□□□□□ -1.2
SMAD3-209ENST00000558894 RBM42Q9BTD8 480 aaKnown RBP7.54□□□□□ -1.2
SMAD3-209ENST00000558894 SLC52A2Q9HAB3 445 aa7.54□□□□□ -1.2
SMAD3-209ENST00000558894 ADCY9O60503 1353 aa7.54□□□□□ -1.2
SMAD3-209ENST00000558894 ANKRD31Q8N7Z5 1873 aa7.53□□□□□ -1.2
SMAD3-209ENST00000558894 PTCD1O75127 700 aaKnown RBP7.53□□□□□ -1.2
SMAD3-209ENST00000558894 MMP10P09238 476 aa7.53□□□□□ -1.2
SMAD3-209ENST00000558894 C1orf141Q5JVX7 400 aa7.53□□□□□ -1.2
SMAD3-209ENST00000558894 TRAPPC3LQ5T215 181 aa7.53□□□□□ -1.2
SMAD3-209ENST00000558894 RTCBQ9Y3I0 505 aaKnown RBP7.53□□□□□ -1.2
SMAD3-209ENST00000558894 SCN7AQ01118 1682 aa7.53□□□□□ -1.2
SMAD3-209ENST00000558894 BCORQ6W2J9 1755 aa7.53□□□□□ -1.2
SMAD3-209ENST00000558894 KDM3BQ7LBC6 1761 aa7.52□□□□□ -1.21
SMAD3-209ENST00000558894 CEMIPQ8WUJ3 1361 aa7.52□□□□□ -1.21
SMAD3-209ENST00000558894 GRIN3BO60391 1043 aa7.52□□□□□ -1.21
SMAD3-209ENST00000558894 CYP19A1P11511 503 aaPredicted RBP7.52□□□□□ -1.21
SMAD3-209ENST00000558894 KCNA3P22001 575 aa7.52□□□□□ -1.21
SMAD3-209ENST00000558894 CRKLP46109 303 aaKnown RBP7.52□□□□□ -1.21
SMAD3-209ENST00000558894 SLC39A6Q13433 755 aa7.52□□□□□ -1.21
SMAD3-209ENST00000558894 DNAJC10Q8IXB1 793 aa7.52□□□□□ -1.21
SMAD3-209ENST00000558894 IL17REQ8NFR9 667 aa7.52□□□□□ -1.21
SMAD3-209ENST00000558894 PHACTR3Q96KR7 559 aa7.52□□□□□ -1.21
SMAD3-209ENST00000558894 USP42Q9H9J4 1324 aaKnown RBP7.52□□□□□ -1.21
SMAD3-209ENST00000558894 CCDC88AQ3V6T2 1871 aa7.51□□□□□ -1.21
SMAD3-209ENST00000558894 PPP2R1AP30153 589 aa7.51□□□□□ -1.21
SMAD3-209ENST00000558894 TM4SF1P30408 202 aa7.51□□□□□ -1.21
SMAD3-209ENST00000558894 DDR1Q08345 913 aa7.51□□□□□ -1.21
SMAD3-209ENST00000558894 FKBP8Q14318 412 aa7.51□□□□□ -1.21
SMAD3-209ENST00000558894 PELP1Q8IZL8 1130 aaKnown RBP7.51□□□□□ -1.21
SMAD3-209ENST00000558894 NLGN1Q8N2Q7 840 aa7.51□□□□□ -1.21
SMAD3-209ENST00000558894 RSPH6AQ9H0K4 717 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms