RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 UNC5CLQ8IV45 518 aa14.54□□□□□ -0.08
HMG20A-206ENST00000558845 IL17REQ8NFR9 667 aa14.54□□□□□ -0.08
HMG20A-206ENST00000558845 RCAN3Q9UKA8 241 aa14.54□□□□□ -0.08
HMG20A-206ENST00000558845 SPATA31A1Q5TZJ5 1347 aa14.54□□□□□ -0.08
HMG20A-206ENST00000558845 SPATA31A5Q5VU36 1347 aa14.54□□□□□ -0.08
HMG20A-206ENST00000558845 SPATA31A7Q8IWB4 1347 aa14.54□□□□□ -0.08
HMG20A-206ENST00000558845 MRC1P22897 1456 aa14.53□□□□□ -0.08
HMG20A-206ENST00000558845 PCDH11XQ9BZA7 1347 aa14.53□□□□□ -0.08
HMG20A-206ENST00000558845 PCDH11YQ9BZA8 1340 aa14.53□□□□□ -0.08
HMG20A-206ENST00000558845 PHKG2P15735 406 aa14.53□□□□□ -0.08
HMG20A-206ENST00000558845 BARGINQ6ZT62 677 aa14.53□□□□□ -0.08
HMG20A-206ENST00000558845 MCM10Q7L590 875 aa14.53□□□□□ -0.08
HMG20A-206ENST00000558845 IFNL2Q8IZJ0 200 aa14.53□□□□□ -0.08
HMG20A-206ENST00000558845 ZNF428Q96B54 188 aa14.53□□□□□ -0.08
HMG20A-206ENST00000558845 THUMPD2Q9BTF0 503 aaKnown RBP14.53□□□□□ -0.08
HMG20A-206ENST00000558845 DCTN1Q14203 1278 aa14.52□□□□□ -0.09
HMG20A-206ENST00000558845 NKX1-1Q15270 411 aaPredicted RBP14.52□□□□□ -0.09
HMG20A-206ENST00000558845 VPS72Q15906 364 aa14.52□□□□□ -0.09
HMG20A-206ENST00000558845 ZCRB1Q8TBF4 217 aaKnown RBP14.52□□□□□ -0.09
HMG20A-206ENST00000558845 SHANK3Q9BYB0 1731 aa14.52□□□□□ -0.09
HMG20A-206ENST00000558845 CYP27B1O15528 508 aa14.51□□□□□ -0.09
HMG20A-206ENST00000558845 RNMTO43148 476 aaKnown RBP14.51□□□□□ -0.09
HMG20A-206ENST00000558845 NGLY1Q96IV0 654 aa14.51□□□□□ -0.09
HMG20A-206ENST00000558845 MBIPQ9NS73 344 aa14.51□□□□□ -0.09
HMG20A-206ENST00000558845 KDM6AO15550 1401 aaPredicted RBP14.5□□□□□ -0.09
HMG20A-206ENST00000558845 SCN11AQ9UI33 1791 aa14.5□□□□□ -0.09
HMG20A-206ENST00000558845 SOS1Q07889 1333 aaPredicted RBP14.5□□□□□ -0.09
HMG20A-206ENST00000558845 TAF7Q15545 349 aaPredicted RBP14.5□□□□□ -0.09
HMG20A-206ENST00000558845 DCAF5Q96JK2 942 aa14.5□□□□□ -0.09
HMG20A-206ENST00000558845 TNS2Q63HR2 1409 aa14.49□□□□□ -0.09
HMG20A-206ENST00000558845 TPRNQ4KMQ1 711 aa14.49□□□□□ -0.09
HMG20A-206ENST00000558845 ILDR1Q86SU0 546 aaPredicted RBP14.49□□□□□ -0.09
HMG20A-206ENST00000558845 TSR2Q969E8 191 aaKnown RBP14.49□□□□□ -0.09
HMG20A-206ENST00000558845 C8orf37Q96NL8 207 aa14.49□□□□□ -0.09
HMG20A-206ENST00000558845 SUPT16HQ9Y5B9 1047 aaKnown RBP14.49□□□□□ -0.09
HMG20A-206ENST00000558845 SIPA1L3O60292 1781 aaPredicted RBP14.49□□□□□ -0.09
HMG20A-206ENST00000558845 VIRMAQ69YN4 1812 aaKnown RBP14.48□□□□□ -0.09
HMG20A-206ENST00000558845 EXOSC9Q06265 439 aaKnown RBP14.48□□□□□ -0.09
HMG20A-206ENST00000558845 FKBP8Q14318 412 aa14.48□□□□□ -0.09
HMG20A-206ENST00000558845 FBXO41Q8TF61 875 aa14.48□□□□□ -0.09
HMG20A-206ENST00000558845 KDM3BQ7LBC6 1761 aa14.47□□□□□ -0.09
HMG20A-206ENST00000558845 MPRIPQ6WCQ1 1025 aa14.47□□□□□ -0.09
HMG20A-206ENST00000558845 LGR6Q9HBX8 967 aa14.47□□□□□ -0.09
HMG20A-206ENST00000558845 USP21Q9UK80 565 aa14.47□□□□□ -0.09
HMG20A-206ENST00000558845 ATRNO75882 1429 aa14.47□□□□□ -0.09
HMG20A-206ENST00000558845 BRPF1P55201 1214 aaPredicted RBP14.46□□□□□ -0.09
HMG20A-206ENST00000558845 TEFQ10587 303 aa14.46□□□□□ -0.09
HMG20A-206ENST00000558845 ERVV-2B6SEH9 535 aa14.45□□□□□ -0.1
HMG20A-206ENST00000558845 RARSP54136 660 aaKnown RBP14.45□□□□□ -0.1
HMG20A-206ENST00000558845 ALDH1L2Q3SY69 923 aa14.45□□□□□ -0.1
HMG20A-206ENST00000558845 MEX3CQ5U5Q3 659 aaKnown RBP14.45□□□□□ -0.1
HMG20A-206ENST00000558845 SLC52A2Q9HAB3 445 aa14.45□□□□□ -0.1
HMG20A-206ENST00000558845 USP35Q9P2H5 1018 aa14.45□□□□□ -0.1
HMG20A-206ENST00000558845 TSPYL4Q9UJ04 414 aa14.45□□□□□ -0.1
HMG20A-206ENST00000558845 LAS1LQ9Y4W2 734 aaKnown RBP14.45□□□□□ -0.1
HMG20A-206ENST00000558845 AFF2P51816 1311 aa14.44□□□□□ -0.1
HMG20A-206ENST00000558845 EXOC5O00471 708 aa14.44□□□□□ -0.1
HMG20A-206ENST00000558845 VAMP4O75379 141 aa14.44□□□□□ -0.1
HMG20A-206ENST00000558845 HOXB7P09629 217 aa14.44□□□□□ -0.1
HMG20A-206ENST00000558845 RRP1P56182 461 aaKnown RBP14.44□□□□□ -0.1
HMG20A-206ENST00000558845 ERICH6BQ5W0A0 696 aa14.44□□□□□ -0.1
HMG20A-206ENST00000558845 THSD7AQ9UPZ6 1657 aa14.44□□□□□ -0.1
HMG20A-206ENST00000558845 TWISTNBQ3B726 338 aaPredicted RBP14.43□□□□□ -0.1
HMG20A-206ENST00000558845 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.43□□□□□ -0.1
HMG20A-206ENST00000558845 FARP1Q9Y4F1 1045 aaPredicted RBP14.43□□□□□ -0.1
HMG20A-206ENST00000558845 HEG1Q9ULI3 1381 aa14.43□□□□□ -0.1
HMG20A-206ENST00000558845 ONECUT3O60422 494 aaPredicted RBP14.42□□□□□ -0.1
HMG20A-206ENST00000558845 NEFLP07196 543 aa14.42□□□□□ -0.1
HMG20A-206ENST00000558845 CHMP4AQ9BY43 222 aa14.42□□□□□ -0.1
HMG20A-206ENST00000558845 TRPC5Q9UL62 973 aaPredicted RBP14.42□□□□□ -0.1
HMG20A-206ENST00000558845 GLI3P10071 1580 aa14.42□□□□□ -0.1
HMG20A-206ENST00000558845 BTBD11A6QL63 1104 aa14.41□□□□□ -0.1
HMG20A-206ENST00000558845 EIF4A1P60842 406 aaKnown RBP14.41□□□□□ -0.1
HMG20A-206ENST00000558845 DDB1Q16531 1140 aa14.41□□□□□ -0.1
HMG20A-206ENST00000558845 PELP1Q8IZL8 1130 aaKnown RBP14.41□□□□□ -0.1
HMG20A-206ENST00000558845 TSPYL6Q8N831 410 aa14.41□□□□□ -0.1
HMG20A-206ENST00000558845 C8orf58Q8NAV2 365 aa14.41□□□□□ -0.1
HMG20A-206ENST00000558845 GJD4Q96KN9 370 aaPredicted RBP14.41□□□□□ -0.1
HMG20A-206ENST00000558845 BCL9O00512 1426 aa14.41□□□□□ -0.1
HMG20A-206ENST00000558845 TULP1O00294 542 aaPredicted RBP14.4□□□□□ -0.1
HMG20A-206ENST00000558845 ERICH6Q7L0X2 663 aa14.4□□□□□ -0.1
HMG20A-206ENST00000558845 VSIG10Q8N0Z9 540 aa14.4□□□□□ -0.1
HMG20A-206ENST00000558845 CCDC9Q9Y3X0 531 aaKnown RBP14.4□□□□□ -0.1
HMG20A-206ENST00000558845 TOGARAM1Q9Y4F4 1720 aa14.4□□□□□ -0.1
HMG20A-206ENST00000558845 PAPPAQ13219 1627 aa14.4□□□□□ -0.1
HMG20A-206ENST00000558845 CABP4P57796 275 aa14.39□□□□□ -0.11
HMG20A-206ENST00000558845 DDX54Q8TDD1 881 aaKnown RBP14.39□□□□□ -0.11
HMG20A-206ENST00000558845 KIF16BQ96L93 1317 aa14.39□□□□□ -0.11
HMG20A-206ENST00000558845 BCAR3O75815 825 aa14.38□□□□□ -0.11
HMG20A-206ENST00000558845 LHX8Q68G74 356 aa14.38□□□□□ -0.11
HMG20A-206ENST00000558845 ZNF790Q6PG37 636 aa14.38□□□□□ -0.11
HMG20A-206ENST00000558845 NFATC2IPQ8NCF5 419 aa14.38□□□□□ -0.11
HMG20A-206ENST00000558845 SSH1Q8WYL5 1049 aa14.38□□□□□ -0.11
HMG20A-206ENST00000558845 MIS18AQ9NYP9 233 aa14.38□□□□□ -0.11
HMG20A-206ENST00000558845 GTF3C3Q9Y5Q9 886 aa14.38□□□□□ -0.11
HMG20A-206ENST00000558845 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
HMG20A-206ENST00000558845 PDE3AQ14432 1141 aa14.37□□□□□ -0.11
HMG20A-206ENST00000558845 ZNF772Q68DY9 489 aaPredicted RBP14.37□□□□□ -0.11
HMG20A-206ENST00000558845 ARHGAP45Q92619 1136 aa14.37□□□□□ -0.11
HMG20A-206ENST00000558845 UBR2Q8IWV8 1755 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms