RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 IGSF1Q8N6C5 1336 aa20.88■□□□□ 0.93
RPL28-206ENST00000558752 ANKRD26Q9UPS8 1709 aa20.88■□□□□ 0.93
RPL28-206ENST00000558752 GNPATO15228 680 aa20.88■□□□□ 0.93
RPL28-206ENST00000558752 PANK3Q9H999 370 aa20.88■□□□□ 0.93
RPL28-206ENST00000558752 LINC00116Q8NCU8 138 aa20.87■□□□□ 0.93
RPL28-206ENST00000558752 UBR3Q6ZT12 1888 aa20.87■□□□□ 0.93
RPL28-206ENST00000558752 HSPA6P17066 643 aa20.86■□□□□ 0.93
RPL28-206ENST00000558752 ASAP1Q9ULH1 1129 aa20.86■□□□□ 0.93
RPL28-206ENST00000558752 ADCY9O60503 1353 aa20.85■□□□□ 0.93
RPL28-206ENST00000558752 ERVV-2B6SEH9 535 aa20.85■□□□□ 0.93
RPL28-206ENST00000558752 TRAPPC3LQ5T215 181 aa20.85■□□□□ 0.93
RPL28-206ENST00000558752 RTCBQ9Y3I0 505 aaKnown RBP20.85■□□□□ 0.93
RPL28-206ENST00000558752 EIF4A2Q14240 407 aaKnown RBP20.84■□□□□ 0.93
RPL28-206ENST00000558752 PLEKHO1Q53GL0 409 aaPredicted RBP20.84■□□□□ 0.93
RPL28-206ENST00000558752 ATG3Q9NT62 314 aa20.84■□□□□ 0.93
RPL28-206ENST00000558752 ITPK1Q13572 414 aa20.83■□□□□ 0.93
RPL28-206ENST00000558752 AMOTQ4VCS5 1084 aa20.83■□□□□ 0.93
RPL28-206ENST00000558752 NLGN1Q8N2Q7 840 aa20.83■□□□□ 0.93
RPL28-206ENST00000558752 DCAF5Q96JK2 942 aa20.83■□□□□ 0.93
RPL28-206ENST00000558752 ADRA2BP18089 450 aa20.82■□□□□ 0.92
RPL28-206ENST00000558752 TNNT2P45379 298 aaPredicted RBP20.82■□□□□ 0.92
RPL28-206ENST00000558752 KNSTRNQ9Y448 316 aa20.81■□□□□ 0.92
RPL28-206ENST00000558752 MMP10P09238 476 aa20.8■□□□□ 0.92
RPL28-206ENST00000558752 TGFB2P61812 414 aa20.8■□□□□ 0.92
RPL28-206ENST00000558752 RC3H1Q5TC82 1133 aaKnown RBP20.8■□□□□ 0.92
RPL28-206ENST00000558752 RBM42Q9BTD8 480 aaKnown RBP20.8■□□□□ 0.92
RPL28-206ENST00000558752 KIF3CO14782 793 aa20.79■□□□□ 0.92
RPL28-206ENST00000558752 CABP4P57796 275 aa20.79■□□□□ 0.92
RPL28-206ENST00000558752 RFC4P35249 363 aa20.78■□□□□ 0.92
RPL28-206ENST00000558752 CCDC87Q9NVE4 849 aa20.78■□□□□ 0.92
RPL28-206ENST00000558752 KIF7Q2M1P5 1343 aa20.78■□□□□ 0.92
RPL28-206ENST00000558752 C1orf141Q5JVX7 400 aa20.77■□□□□ 0.92
RPL28-206ENST00000558752 ZNF530Q6P9A1 599 aaPredicted RBP20.76■□□□□ 0.91
RPL28-206ENST00000558752 CNTNAP4Q9C0A0 1308 aa20.76■□□□□ 0.91
RPL28-206ENST00000558752 KDRP35968 1356 aa20.75■□□□□ 0.91
RPL28-206ENST00000558752 ZNF831Q5JPB2 1677 aa20.75■□□□□ 0.91
RPL28-206ENST00000558752 RPS6KA4O75676 772 aa20.75■□□□□ 0.91
RPL28-206ENST00000558752 MTHFSP49914 203 aa20.75■□□□□ 0.91
RPL28-206ENST00000558752 PARP3Q9Y6F1 533 aa20.75■□□□□ 0.91
RPL28-206ENST00000558752 MORC1Q86VD1 984 aa20.74■□□□□ 0.91
RPL28-206ENST00000558752 ARHGEF1Q92888 912 aaKnown RBP20.74■□□□□ 0.91
RPL28-206ENST00000558752 BCS1LQ9Y276 419 aa20.73■□□□□ 0.91
RPL28-206ENST00000558752 PXDNLA1KZ92 1463 aa20.7■□□□□ 0.9
RPL28-206ENST00000558752 GYS1P13807 737 aa20.7■□□□□ 0.9
RPL28-206ENST00000558752 DNAJC5GQ8N7S2 189 aa20.7■□□□□ 0.9
RPL28-206ENST00000558752 SLC4A9Q96Q91 983 aa20.7■□□□□ 0.9
RPL28-206ENST00000558752 CICQ96RK0 1608 aaPredicted RBP20.7■□□□□ 0.9
RPL28-206ENST00000558752 KIF13BQ9NQT8 1826 aa20.69■□□□□ 0.9
RPL28-206ENST00000558752 A0A0G2JLW4 131 aa20.69■□□□□ 0.9
RPL28-206ENST00000558752 PER1O15534 1290 aaPredicted RBP20.69■□□□□ 0.9
RPL28-206ENST00000558752 AMER1Q5JTC6 1135 aaPredicted RBP20.69■□□□□ 0.9
RPL28-206ENST00000558752 ARHGAP27Q6ZUM4 889 aa20.69■□□□□ 0.9
RPL28-206ENST00000558752 C10orf71Q711Q0 1435 aa20.69■□□□□ 0.9
RPL28-206ENST00000558752 PTCD1O75127 700 aaKnown RBP20.68■□□□□ 0.9
RPL28-206ENST00000558752 FCHSD2O94868 740 aa20.68■□□□□ 0.9
RPL28-206ENST00000558752 NFATC2IPQ8NCF5 419 aa20.68■□□□□ 0.9
RPL28-206ENST00000558752 DPEP1P16444 411 aa20.67■□□□□ 0.9
RPL28-206ENST00000558752 SULT6B1Q6IMI4 303 aa20.67■□□□□ 0.9
RPL28-206ENST00000558752 KDM6AO15550 1401 aaPredicted RBP20.67■□□□□ 0.9
RPL28-206ENST00000558752 PIM2Q9P1W9 311 aa20.66■□□□□ 0.9
RPL28-206ENST00000558752 C4AP0C0L4 1744 aa20.66■□□□□ 0.9
RPL28-206ENST00000558752 COL5A3P25940 1745 aaPredicted RBP20.66■□□□□ 0.9
RPL28-206ENST00000558752 TOMM70O94826 608 aa20.65■□□□□ 0.9
RPL28-206ENST00000558752 CRKLP46109 303 aaKnown RBP20.65■□□□□ 0.9
RPL28-206ENST00000558752 APLP1P51693 650 aa20.64■□□□□ 0.89
RPL28-206ENST00000558752 HTRA3P83110 453 aa20.64■□□□□ 0.89
RPL28-206ENST00000558752 AEBP1Q8IUX7 1158 aa20.64■□□□□ 0.89
RPL28-206ENST00000558752 N4BP2Q86UW6 1770 aaPredicted RBP20.64■□□□□ 0.89
RPL28-206ENST00000558752 AKAP4Q5JQC9 854 aa20.63■□□□□ 0.89
RPL28-206ENST00000558752 NMRK2Q9NPI5 230 aa20.63■□□□□ 0.89
RPL28-206ENST00000558752 NPC1L1Q9UHC9 1359 aa20.62■□□□□ 0.89
RPL28-206ENST00000558752 ZPR1O75312 459 aa20.62■□□□□ 0.89
RPL28-206ENST00000558752 DALRD3Q5D0E6 543 aaKnown RBP20.62■□□□□ 0.89
RPL28-206ENST00000558752 USP42Q9H9J4 1324 aaKnown RBP20.61■□□□□ 0.89
RPL28-206ENST00000558752 IL13P35225 146 aa20.61■□□□□ 0.89
RPL28-206ENST00000558752 C16orf71Q8IYS4 520 aaPredicted RBP20.61■□□□□ 0.89
RPL28-206ENST00000558752 MYH14Q7Z406 1995 aaKnown RBP20.6■□□□□ 0.89
RPL28-206ENST00000558752 KIAA1551Q9HCM1 1747 aa20.6■□□□□ 0.89
RPL28-206ENST00000558752 SLC52A2Q9HAB3 445 aa20.59■□□□□ 0.89
RPL28-206ENST00000558752 KDM2BQ8NHM5 1336 aa20.58■□□□□ 0.89
RPL28-206ENST00000558752 FKBP8Q14318 412 aa20.58■□□□□ 0.89
RPL28-206ENST00000558752 C9orf131Q5VYM1 1079 aa20.58■□□□□ 0.89
RPL28-206ENST00000558752 SRP68Q9UHB9 627 aaKnown RBP20.58■□□□□ 0.89
RPL28-206ENST00000558752 KCNA3P22001 575 aa20.57■□□□□ 0.88
RPL28-206ENST00000558752 COL13A1Q5TAT6 717 aaPredicted RBP20.57■□□□□ 0.88
RPL28-206ENST00000558752 ARFGEF1Q9Y6D6 1849 aa20.56■□□□□ 0.88
RPL28-206ENST00000558752 INTS5Q6P9B9 1019 aaKnown RBP20.56■□□□□ 0.88
RPL28-206ENST00000558752 SCN11AQ9UI33 1791 aa20.56■□□□□ 0.88
RPL28-206ENST00000558752 CC2D1BQ5T0F9 858 aaKnown RBP20.55■□□□□ 0.88
RPL28-206ENST00000558752 DNAJC10Q8IXB1 793 aa20.55■□□□□ 0.88
RPL28-206ENST00000558752 RBM46Q8TBY0 533 aaKnown RBP20.55■□□□□ 0.88
RPL28-206ENST00000558752 BRCA1P38398 1863 aaKnown RBP20.55■□□□□ 0.88
RPL28-206ENST00000558752 RNMTO43148 476 aaKnown RBP20.54■□□□□ 0.88
RPL28-206ENST00000558752 TM4SF1P30408 202 aa20.54■□□□□ 0.88
RPL28-206ENST00000558752 DDR1Q08345 913 aa20.54■□□□□ 0.88
RPL28-206ENST00000558752 VSIG10Q8N0Z9 540 aa20.54■□□□□ 0.88
RPL28-206ENST00000558752 TJP1Q07157 1748 aa20.53■□□□□ 0.88
RPL28-206ENST00000558752 POLRMTO00411 1230 aaKnown RBP20.53■□□□□ 0.88
RPL28-206ENST00000558752 USPL1Q5W0Q7 1092 aa20.53■□□□□ 0.88
RPL28-206ENST00000558752 RNF181Q9P0P0 153 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms