RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 SLC4A9Q96Q91 983 aa18.42■□□□□ 0.54
TSPAN3-205ENST00000558745 PLEKHF1Q96S99 279 aa18.42■□□□□ 0.54
TSPAN3-205ENST00000558745 RBM42Q9BTD8 480 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-205ENST00000558745 SLC52A2Q9HAB3 445 aa18.42■□□□□ 0.54
TSPAN3-205ENST00000558745 LOC102724428A0A0B4J2F2 783 aa18.41■□□□□ 0.54
TSPAN3-205ENST00000558745 SIK1P57059 783 aa18.41■□□□□ 0.54
TSPAN3-205ENST00000558745 SLC39A6Q13433 755 aa18.41■□□□□ 0.54
TSPAN3-205ENST00000558745 SMIM5Q71RC9 77 aa18.41■□□□□ 0.54
TSPAN3-205ENST00000558745 MAP3K5Q99683 1374 aa18.4■□□□□ 0.54
TSPAN3-205ENST00000558745 ATP6V1AP38606 617 aa18.4■□□□□ 0.54
TSPAN3-205ENST00000558745 ITPK1Q13572 414 aa18.4■□□□□ 0.54
TSPAN3-205ENST00000558745 DCTN1Q14203 1278 aa18.4■□□□□ 0.54
TSPAN3-205ENST00000558745 PTCD1O75127 700 aaKnown RBP18.39■□□□□ 0.53
TSPAN3-205ENST00000558745 MCM10Q7L590 875 aa18.39■□□□□ 0.53
TSPAN3-205ENST00000558745 PPP1R1BQ9UD71 204 aaPredicted RBP18.39■□□□□ 0.53
TSPAN3-205ENST00000558745 SCN11AQ9UI33 1791 aa18.39■□□□□ 0.53
TSPAN3-205ENST00000558745 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
TSPAN3-205ENST00000558745 SENP3-EIF4A1A0A087X0R7 540 aa18.38■□□□□ 0.53
TSPAN3-205ENST00000558745 CCDC146Q8IYE0 955 aa18.38■□□□□ 0.53
TSPAN3-205ENST00000558745 LINC00116Q8NCU8 138 aa18.38■□□□□ 0.53
TSPAN3-205ENST00000558745 ZBTB7AO95365 584 aa18.37■□□□□ 0.53
TSPAN3-205ENST00000558745 TFCP2L1Q9NZI6 479 aa18.37■□□□□ 0.53
TSPAN3-205ENST00000558745 ADAMTS8Q9UP79 889 aa18.37■□□□□ 0.53
TSPAN3-205ENST00000558745 AMIGO3Q86WK7 504 aa18.36■□□□□ 0.53
TSPAN3-205ENST00000558745 ATF5Q9Y2D1 282 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-205ENST00000558745 PNPLA7Q6ZV29 1317 aa18.35■□□□□ 0.53
TSPAN3-205ENST00000558745 ANP32CO43423 234 aa18.35■□□□□ 0.53
TSPAN3-205ENST00000558745 TEFQ10587 303 aa18.34■□□□□ 0.53
TSPAN3-205ENST00000558745 WDR43Q15061 677 aaKnown RBP eCLIP18.34■□□□□ 0.53
TSPAN3-205ENST00000558745 VIRMAQ69YN4 1812 aaKnown RBP18.34■□□□□ 0.53
TSPAN3-205ENST00000558745 KCNQ3O43525 872 aa18.33■□□□□ 0.53
TSPAN3-205ENST00000558745 NEFMP07197 916 aa18.33■□□□□ 0.53
TSPAN3-205ENST00000558745 NFE2L2Q16236 605 aa18.33■□□□□ 0.53
TSPAN3-205ENST00000558745 COL23A1Q86Y22 540 aaPredicted RBP18.33■□□□□ 0.53
TSPAN3-205ENST00000558745 RTF1Q92541 710 aaKnown RBP18.33■□□□□ 0.53
TSPAN3-205ENST00000558745 THUMPD2Q9BTF0 503 aaKnown RBP18.33■□□□□ 0.53
TSPAN3-205ENST00000558745 SPON1Q9HCB6 807 aa18.33■□□□□ 0.53
TSPAN3-205ENST00000558745 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.53
TSPAN3-205ENST00000558745 ADAMTS7Q9UKP4 1686 aa18.33■□□□□ 0.52
TSPAN3-205ENST00000558745 MSH5O43196 834 aa18.32■□□□□ 0.52
TSPAN3-205ENST00000558745 MRC1P22897 1456 aa18.32■□□□□ 0.52
TSPAN3-205ENST00000558745 MAPK8IP3Q9UPT6 1336 aa18.32■□□□□ 0.52
TSPAN3-205ENST00000558745 TAF1LQ8IZX4 1826 aa18.31■□□□□ 0.52
TSPAN3-205ENST00000558745 PHF14O94880 888 aa18.31■□□□□ 0.52
TSPAN3-205ENST00000558745 NEUROD2Q15784 382 aa18.31■□□□□ 0.52
TSPAN3-205ENST00000558745 ZNF784Q8NCA9 323 aaPredicted RBP18.31■□□□□ 0.52
TSPAN3-205ENST00000558745 AK7Q96M32 723 aa18.31■□□□□ 0.52
TSPAN3-205ENST00000558745 PNNQ9H307 717 aaKnown RBP18.31■□□□□ 0.52
TSPAN3-205ENST00000558745 MIS18AQ9NYP9 233 aa18.31■□□□□ 0.52
TSPAN3-205ENST00000558745 C5P01031 1676 aa18.31■□□□□ 0.52
TSPAN3-205ENST00000558745 CEMIPQ8WUJ3 1361 aa18.31■□□□□ 0.52
TSPAN3-205ENST00000558745 CASZ1Q86V15 1759 aa18.3■□□□□ 0.52
TSPAN3-205ENST00000558745 DNAJC10Q8IXB1 793 aa18.3■□□□□ 0.52
TSPAN3-205ENST00000558745 BTBD11A6QL63 1104 aa18.29■□□□□ 0.52
TSPAN3-205ENST00000558745 RIPK4P57078 832 aa18.29■□□□□ 0.52
TSPAN3-205ENST00000558745 TUBGCP6Q96RT7 1819 aa18.29■□□□□ 0.52
TSPAN3-205ENST00000558745 HTATSF1O43719 755 aaKnown RBP18.28■□□□□ 0.52
TSPAN3-205ENST00000558745 TMPOP42166 694 aaKnown RBP18.28■□□□□ 0.52
TSPAN3-205ENST00000558745 ZNF790Q6PG37 636 aa18.28■□□□□ 0.52
TSPAN3-205ENST00000558745 RUNDC1Q96C34 613 aa18.28■□□□□ 0.52
TSPAN3-205ENST00000558745 ZNF496Q96IT1 587 aaPredicted RBP18.28■□□□□ 0.52
TSPAN3-205ENST00000558745 C4BP0C0L5 1744 aa18.28■□□□□ 0.52
TSPAN3-205ENST00000558745 GNPATO15228 680 aa18.27■□□□□ 0.52
TSPAN3-205ENST00000558745 C1QTNF8P60827 252 aa18.27■□□□□ 0.52
TSPAN3-205ENST00000558745 TTC5Q8N0Z6 440 aa18.27■□□□□ 0.52
TSPAN3-205ENST00000558745 DLG5Q8TDM6 1919 aa18.27■□□□□ 0.52
TSPAN3-205ENST00000558745 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.26■□□□□ 0.51
TSPAN3-205ENST00000558745 PTGER2P43116 358 aa18.26■□□□□ 0.51
TSPAN3-205ENST00000558745 MSL1Q68DK7 614 aa18.26■□□□□ 0.51
TSPAN3-205ENST00000558745 MRS2Q9HD23 443 aa18.26■□□□□ 0.51
TSPAN3-205ENST00000558745 KCPQ6ZWJ8 1503 aa18.25■□□□□ 0.51
TSPAN3-205ENST00000558745 MTFR1LQ9H019 292 aa18.25■□□□□ 0.51
TSPAN3-205ENST00000558745 CRKLP46109 303 aaKnown RBP18.24■□□□□ 0.51
TSPAN3-205ENST00000558745 TAF7Q15545 349 aaPredicted RBP18.24■□□□□ 0.51
TSPAN3-205ENST00000558745 INTS5Q6P9B9 1019 aaKnown RBP18.24■□□□□ 0.51
TSPAN3-205ENST00000558745 PNISRQ8TF01 805 aaKnown RBP18.24■□□□□ 0.51
TSPAN3-205ENST00000558745 SIPA1L3O60292 1781 aaPredicted RBP18.24■□□□□ 0.51
TSPAN3-205ENST00000558745 PRAMEF22A3QJZ6 481 aa18.23■□□□□ 0.51
TSPAN3-205ENST00000558745 CYP19A1P11511 503 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-205ENST00000558745 RC3H1Q5TC82 1133 aaKnown RBP18.23■□□□□ 0.51
TSPAN3-205ENST00000558745 SGIP1Q9BQI5 828 aa18.23■□□□□ 0.51
TSPAN3-205ENST00000558745 MYH14Q7Z406 1995 aaKnown RBP18.23■□□□□ 0.51
TSPAN3-205ENST00000558745 APAF1O14727 1248 aa18.23■□□□□ 0.51
TSPAN3-205ENST00000558745 SLC16A10Q8TF71 515 aa18.23■□□□□ 0.51
TSPAN3-205ENST00000558745 TRIM35Q9UPQ4 493 aa18.23■□□□□ 0.51
TSPAN3-205ENST00000558745 RTCBQ9Y3I0 505 aaKnown RBP18.23■□□□□ 0.51
TSPAN3-205ENST00000558745 CNTNAP4Q9C0A0 1308 aa18.22■□□□□ 0.51
TSPAN3-205ENST00000558745 TJP1Q07157 1748 aa18.22■□□□□ 0.51
TSPAN3-205ENST00000558745 RPS6KA4O75676 772 aa18.22■□□□□ 0.51
TSPAN3-205ENST00000558745 SSFA2P28290 1259 aa18.22■□□□□ 0.51
TSPAN3-205ENST00000558745 TRAPPC3LQ5T215 181 aa18.22■□□□□ 0.51
TSPAN3-205ENST00000558745 FLAD1Q8NFF5 587 aa18.22■□□□□ 0.51
TSPAN3-205ENST00000558745 ARHGEF1Q92888 912 aaKnown RBP18.22■□□□□ 0.51
TSPAN3-205ENST00000558745 UBR3Q6ZT12 1888 aa18.21■□□□□ 0.51
TSPAN3-205ENST00000558745 UTRNP46939 3433 aa18.21■□□□□ 0.51
TSPAN3-205ENST00000558745 QSER1Q2KHR3 1735 aa18.21■□□□□ 0.51
TSPAN3-205ENST00000558745 HMGB2P26583 209 aaKnown RBP18.21■□□□□ 0.51
TSPAN3-205ENST00000558745 VSIG10Q8N0Z9 540 aa18.21■□□□□ 0.51
TSPAN3-205ENST00000558745 FMNL2Q96PY5 1086 aa18.21■□□□□ 0.51
TSPAN3-205ENST00000558745 USP16Q9Y5T5 823 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms