RNA–Protein interactions for RNA: ENST00000558541.5

CPNE6-207, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-207ENST00000558541 CCDC87Q9NVE4 849 aa18.75■□□□□ 0.59
CPNE6-207ENST00000558541 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
CPNE6-207ENST00000558541 C10orf71Q711Q0 1435 aa18.74■□□□□ 0.59
CPNE6-207ENST00000558541 LINC00116Q8NCU8 138 aa18.74■□□□□ 0.59
CPNE6-207ENST00000558541 PCDH11XQ9BZA7 1347 aa18.74■□□□□ 0.59
CPNE6-207ENST00000558541 PCDH11YQ9BZA8 1340 aa18.74■□□□□ 0.59
CPNE6-207ENST00000558541 MAP3K19Q56UN5 1328 aa18.73■□□□□ 0.59
CPNE6-207ENST00000558541 HSPA5P11021 654 aaKnown RBP18.72■□□□□ 0.59
CPNE6-207ENST00000558541 TMF1P82094 1093 aa18.72■□□□□ 0.59
CPNE6-207ENST00000558541 NBPF6Q5VWK0 638 aa18.72■□□□□ 0.59
CPNE6-207ENST00000558541 NLGN1Q8N2Q7 840 aa18.72■□□□□ 0.59
CPNE6-207ENST00000558541 NBPF4Q96M43 638 aa18.72■□□□□ 0.59
CPNE6-207ENST00000558541 PIM2Q9P1W9 311 aa18.72■□□□□ 0.59
CPNE6-207ENST00000558541 LOC102724428A0A0B4J2F2 783 aa18.71■□□□□ 0.59
CPNE6-207ENST00000558541 FBLN1P23142 703 aa18.71■□□□□ 0.59
CPNE6-207ENST00000558541 SIK1P57059 783 aa18.71■□□□□ 0.59
CPNE6-207ENST00000558541 FAM161AQ3B820 660 aa18.71■□□□□ 0.59
CPNE6-207ENST00000558541 EDC4Q6P2E9 1401 aaKnown RBP18.71■□□□□ 0.59
CPNE6-207ENST00000558541 CD163L1Q9NR16 1453 aa18.71■□□□□ 0.59
CPNE6-207ENST00000558541 DALRD3Q5D0E6 543 aaKnown RBP18.7■□□□□ 0.58
CPNE6-207ENST00000558541 PIGBQ92521 554 aa18.7■□□□□ 0.58
CPNE6-207ENST00000558541 SLC12A5Q9H2X9 1139 aa18.7■□□□□ 0.58
CPNE6-207ENST00000558541 PARP3Q9Y6F1 533 aa18.7■□□□□ 0.58
CPNE6-207ENST00000558541 VEGFAP15692 232 aaPredicted RBP18.69■□□□□ 0.58
CPNE6-207ENST00000558541 ATP6V1AP38606 617 aa18.69■□□□□ 0.58
CPNE6-207ENST00000558541 TRAPPC3LQ5T215 181 aa18.69■□□□□ 0.58
CPNE6-207ENST00000558541 COG3Q96JB2 828 aa18.69■□□□□ 0.58
CPNE6-207ENST00000558541 TERF2IPQ9NYB0 399 aa18.69■□□□□ 0.58
CPNE6-207ENST00000558541 MKRN1Q9UHC7 482 aaKnown RBP18.69■□□□□ 0.58
CPNE6-207ENST00000558541 MAP2P11137 1827 aaKnown RBP18.69■□□□□ 0.58
CPNE6-207ENST00000558541 DCAF5Q96JK2 942 aa18.68■□□□□ 0.58
CPNE6-207ENST00000558541 C4AP0C0L4 1744 aa18.68■□□□□ 0.58
CPNE6-207ENST00000558541 CCDC88AQ3V6T2 1871 aa18.67■□□□□ 0.58
CPNE6-207ENST00000558541 FOXN1O15353 648 aa18.67■□□□□ 0.58
CPNE6-207ENST00000558541 KCNA3P22001 575 aa18.67■□□□□ 0.58
CPNE6-207ENST00000558541 SMG6Q86US8 1419 aaKnown RBP18.66■□□□□ 0.58
CPNE6-207ENST00000558541 ITPK1Q13572 414 aa18.66■□□□□ 0.58
CPNE6-207ENST00000558541 RTCBQ9Y3I0 505 aaKnown RBP18.66■□□□□ 0.58
CPNE6-207ENST00000558541 CYP27B1O15528 508 aa18.65■□□□□ 0.58
CPNE6-207ENST00000558541 AIDAQ96BJ3 306 aa18.65■□□□□ 0.58
CPNE6-207ENST00000558541 PRDM10Q9NQV6 1147 aa18.65■□□□□ 0.58
CPNE6-207ENST00000558541 RFC4P35249 363 aa18.63■□□□□ 0.57
CPNE6-207ENST00000558541 RRS1Q15050 365 aaKnown RBP18.63■□□□□ 0.57
CPNE6-207ENST00000558541 TMOD3Q9NYL9 352 aa18.63■□□□□ 0.57
CPNE6-207ENST00000558541 ASAP1Q9ULH1 1129 aa18.63■□□□□ 0.57
CPNE6-207ENST00000558541 A0A1W2PP64 1363 aa18.63■□□□□ 0.57
CPNE6-207ENST00000558541 ST20-MTHFSA0A0A6YYL1 179 aa18.62■□□□□ 0.57
CPNE6-207ENST00000558541 GLTPD2A6NH11 291 aa18.62■□□□□ 0.57
CPNE6-207ENST00000558541 ARHGEF1Q92888 912 aaKnown RBP18.62■□□□□ 0.57
CPNE6-207ENST00000558541 GYS1P13807 737 aa18.61■□□□□ 0.57
CPNE6-207ENST00000558541 CTCFP49711 727 aaPredicted RBP18.61■□□□□ 0.57
CPNE6-207ENST00000558541 RASSF7Q02833 373 aa18.61■□□□□ 0.57
CPNE6-207ENST00000558541 CHRNA5P30532 468 aa18.6■□□□□ 0.57
CPNE6-207ENST00000558541 ZC3H4Q9UPT8 1303 aaKnown RBP18.59■□□□□ 0.57
CPNE6-207ENST00000558541 ABHD8Q96I13 439 aa18.59■□□□□ 0.57
CPNE6-207ENST00000558541 CREBZFQ9NS37 354 aa18.59■□□□□ 0.57
CPNE6-207ENST00000558541 RTL1A6NKG5 1358 aa18.58■□□□□ 0.57
CPNE6-207ENST00000558541 MLLT1Q03111 559 aaPredicted RBP18.58■□□□□ 0.56
CPNE6-207ENST00000558541 CDCA8Q53HL2 280 aa18.58■□□□□ 0.56
CPNE6-207ENST00000558541 ADRA2BP18089 450 aa18.57■□□□□ 0.56
CPNE6-207ENST00000558541 LMNB1P20700 586 aa18.57■□□□□ 0.56
CPNE6-207ENST00000558541 LBX1P52954 281 aa18.57■□□□□ 0.56
CPNE6-207ENST00000558541 RBM42Q9BTD8 480 aaKnown RBP18.57■□□□□ 0.56
CPNE6-207ENST00000558541 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
CPNE6-207ENST00000558541 SPG7Q9UQ90 795 aa18.56■□□□□ 0.56
CPNE6-207ENST00000558541 TIAM2Q8IVF5 1701 aa18.56■□□□□ 0.56
CPNE6-207ENST00000558541 CCDC85CA6NKD9 419 aa18.55■□□□□ 0.56
CPNE6-207ENST00000558541 HSP90AB2PQ58FF8 381 aa18.55■□□□□ 0.56
CPNE6-207ENST00000558541 ATG3Q9NT62 314 aa18.55■□□□□ 0.56
CPNE6-207ENST00000558541 NKX1-1Q15270 411 aaPredicted RBP18.54■□□□□ 0.56
CPNE6-207ENST00000558541 DPY19L2Q6NUT2 758 aa18.54■□□□□ 0.56
CPNE6-207ENST00000558541 TESK2Q96S53 571 aa18.54■□□□□ 0.56
CPNE6-207ENST00000558541 RPS6KA4O75676 772 aa18.53■□□□□ 0.56
CPNE6-207ENST00000558541 CHADLQ6NUI6 762 aa18.53■□□□□ 0.56
CPNE6-207ENST00000558541 RC3H1Q5TC82 1133 aaKnown RBP18.52■□□□□ 0.56
CPNE6-207ENST00000558541 PUS7Q96PZ0 661 aaKnown RBP18.52■□□□□ 0.56
CPNE6-207ENST00000558541 CNTNAP1P78357 1384 aa18.52■□□□□ 0.55
CPNE6-207ENST00000558541 MYH14Q7Z406 1995 aaKnown RBP18.51■□□□□ 0.55
CPNE6-207ENST00000558541 WASHC2AQ641Q2 1341 aa18.51■□□□□ 0.55
CPNE6-207ENST00000558541 POTECB2RU33 542 aa18.51■□□□□ 0.55
CPNE6-207ENST00000558541 INSRP06213 1382 aa18.51■□□□□ 0.55
CPNE6-207ENST00000558541 DDR1Q08345 913 aa18.5■□□□□ 0.55
CPNE6-207ENST00000558541 FKBP8Q14318 412 aa18.5■□□□□ 0.55
CPNE6-207ENST00000558541 GGNBP2Q9H3C7 697 aa18.5■□□□□ 0.55
CPNE6-207ENST00000558541 SRP68Q9UHB9 627 aaKnown RBP18.5■□□□□ 0.55
CPNE6-207ENST00000558541 KIF7Q2M1P5 1343 aa18.49■□□□□ 0.55
CPNE6-207ENST00000558541 KDM6AO15550 1401 aaPredicted RBP18.49■□□□□ 0.55
CPNE6-207ENST00000558541 COL5A3P25940 1745 aaPredicted RBP18.49■□□□□ 0.55
CPNE6-207ENST00000558541 VEGFBP49765 207 aa18.49■□□□□ 0.55
CPNE6-207ENST00000558541 VIRMAQ69YN4 1812 aaKnown RBP18.48■□□□□ 0.55
CPNE6-207ENST00000558541 CNTNAP4Q9C0A0 1308 aa18.48■□□□□ 0.55
CPNE6-207ENST00000558541 DDX10Q13206 875 aaKnown RBP18.47■□□□□ 0.55
CPNE6-207ENST00000558541 IFNL2Q8IZJ0 200 aa18.47■□□□□ 0.55
CPNE6-207ENST00000558541 CFAP44Q96MT7 982 aa18.47■□□□□ 0.55
CPNE6-207ENST00000558541 SLC4A9Q96Q91 983 aa18.47■□□□□ 0.55
CPNE6-207ENST00000558541 WBP1LQ9NX94 342 aa18.47■□□□□ 0.55
CPNE6-207ENST00000558541 FLT4P35916 1363 aa18.46■□□□□ 0.55
CPNE6-207ENST00000558541 KDRP35968 1356 aa18.46■□□□□ 0.55
CPNE6-207ENST00000558541 DICER1Q9UPY3 1922 aaKnown RBP18.45■□□□□ 0.54
CPNE6-207ENST00000558541 POTEIP0CG38 1075 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms