RNA–Protein interactions for RNA: ENST00000558485.1

NEO1-203, Transcript of neogenin 1, humanhuman

TSL 2

Gene NEO1, Length 374 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-203ENST00000558485 ZNF853P0CG23 659 aa13.41□□□□□ -0.26
NEO1-203ENST00000558485 CABP4P57796 275 aa13.41□□□□□ -0.26
NEO1-203ENST00000558485 TEFQ10587 303 aa13.41□□□□□ -0.26
NEO1-203ENST00000558485 NFATC2IPQ8NCF5 419 aa13.41□□□□□ -0.26
NEO1-203ENST00000558485 CDCA7LQ96GN5 454 aa13.41□□□□□ -0.26
NEO1-203ENST00000558485 TNS1Q9HBL0 1735 aaKnown RBP13.41□□□□□ -0.26
NEO1-203ENST00000558485 IL16Q14005 1332 aa13.4□□□□□ -0.26
NEO1-203ENST00000558485 TAF7Q15545 349 aaPredicted RBP13.4□□□□□ -0.26
NEO1-203ENST00000558485 FAM196AQ6ZSG2 479 aa13.4□□□□□ -0.26
NEO1-203ENST00000558485 PIGBQ92521 554 aa13.4□□□□□ -0.26
NEO1-203ENST00000558485 MIS18AQ9NYP9 233 aa13.4□□□□□ -0.26
NEO1-203ENST00000558485 CHL1O00533 1208 aa13.39□□□□□ -0.27
NEO1-203ENST00000558485 CALD1Q05682 793 aaKnown RBP13.39□□□□□ -0.27
NEO1-203ENST00000558485 GOLGA2Q08379 1002 aa13.39□□□□□ -0.27
NEO1-203ENST00000558485 SYTL4Q96C24 671 aaPredicted RBP13.39□□□□□ -0.27
NEO1-203ENST00000558485 IFT57Q9NWB7 429 aa13.39□□□□□ -0.27
NEO1-203ENST00000558485 TMOD3Q9NYL9 352 aa13.39□□□□□ -0.27
NEO1-203ENST00000558485 LAS1LQ9Y4W2 734 aaKnown RBP13.39□□□□□ -0.27
NEO1-203ENST00000558485 KCNQ3O43525 872 aa13.38□□□□□ -0.27
NEO1-203ENST00000558485 SLFN5Q08AF3 891 aa13.38□□□□□ -0.27
NEO1-203ENST00000558485 CFAP44Q96MT7 982 aa13.38□□□□□ -0.27
NEO1-203ENST00000558485 KCPQ6ZWJ8 1503 aa13.38□□□□□ -0.27
NEO1-203ENST00000558485 KAT6BQ8WYB5 2073 aa13.37□□□□□ -0.27
NEO1-203ENST00000558485 BTBD11A6QL63 1104 aa13.37□□□□□ -0.27
NEO1-203ENST00000558485 GNAI1P63096 354 aa13.37□□□□□ -0.27
NEO1-203ENST00000558485 SLC39A6Q13433 755 aa13.37□□□□□ -0.27
NEO1-203ENST00000558485 TRMT2AQ8IZ69 625 aaKnown RBP13.37□□□□□ -0.27
NEO1-203ENST00000558485 TSR2Q969E8 191 aaKnown RBP13.37□□□□□ -0.27
NEO1-203ENST00000558485 MBIPQ9NS73 344 aa13.37□□□□□ -0.27
NEO1-203ENST00000558485 C5P01031 1676 aa13.37□□□□□ -0.27
NEO1-203ENST00000558485 FANCIQ9NVI1 1328 aa13.37□□□□□ -0.27
NEO1-203ENST00000558485 LY75O60449 1722 aa13.36□□□□□ -0.27
NEO1-203ENST00000558485 TRIM37O94972 964 aa13.36□□□□□ -0.27
NEO1-203ENST00000558485 ATG3Q9NT62 314 aa13.36□□□□□ -0.27
NEO1-203ENST00000558485 BABAM1Q9NWV8 329 aa13.36□□□□□ -0.27
NEO1-203ENST00000558485 TSPYL4Q9UJ04 414 aa13.36□□□□□ -0.27
NEO1-203ENST00000558485 ASAP1Q9ULH1 1129 aa13.36□□□□□ -0.27
NEO1-203ENST00000558485 E9PSI1 815 aa13.35□□□□□ -0.27
NEO1-203ENST00000558485 DUSP27Q5VZP5 1158 aa13.35□□□□□ -0.27
NEO1-203ENST00000558485 ZNF790Q6PG37 636 aa13.35□□□□□ -0.27
NEO1-203ENST00000558485 BCL11BQ9C0K0 894 aaPredicted RBP13.35□□□□□ -0.27
NEO1-203ENST00000558485 TJP1Q07157 1748 aa13.34□□□□□ -0.27
NEO1-203ENST00000558485 MYH16Q9H6N6 1097 aa13.34□□□□□ -0.27
NEO1-203ENST00000558485 CICQ96RK0 1608 aaPredicted RBP13.34□□□□□ -0.27
NEO1-203ENST00000558485 EIF4A1P60842 406 aaKnown RBP13.33□□□□□ -0.28
NEO1-203ENST00000558485 KRT24Q2M2I5 525 aa13.33□□□□□ -0.28
NEO1-203ENST00000558485 ILDR2Q71H61 639 aa13.33□□□□□ -0.28
NEO1-203ENST00000558485 ZNF831Q5JPB2 1677 aa13.33□□□□□ -0.28
NEO1-203ENST00000558485 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
NEO1-203ENST00000558485 HEG1Q9ULI3 1381 aa13.32□□□□□ -0.28
NEO1-203ENST00000558485 LAMB4A4D0S4 1761 aa13.32□□□□□ -0.28
NEO1-203ENST00000558485 EP400Q96L91 3159 aa13.32□□□□□ -0.28
NEO1-203ENST00000558485 ZNF496Q96IT1 587 aaPredicted RBP13.32□□□□□ -0.28
NEO1-203ENST00000558485 RGPD3A6NKT7 1758 aaPredicted RBP13.32□□□□□ -0.28
NEO1-203ENST00000558485 RGPD4Q7Z3J3 1758 aa13.32□□□□□ -0.28
NEO1-203ENST00000558485 PTCD1O75127 700 aaKnown RBP13.31□□□□□ -0.28
NEO1-203ENST00000558485 EXOSC9Q06265 439 aaKnown RBP13.31□□□□□ -0.28
NEO1-203ENST00000558485 TTC5Q8N0Z6 440 aa13.31□□□□□ -0.28
NEO1-203ENST00000558485 C8orf58Q8NAV2 365 aa13.31□□□□□ -0.28
NEO1-203ENST00000558485 SLC4A9Q96Q91 983 aa13.31□□□□□ -0.28
NEO1-203ENST00000558485 COL5A3P25940 1745 aaPredicted RBP13.3□□□□□ -0.28
NEO1-203ENST00000558485 TAF1LQ8IZX4 1826 aa13.3□□□□□ -0.28
NEO1-203ENST00000558485 PRAMEF22A3QJZ6 481 aa13.3□□□□□ -0.28
NEO1-203ENST00000558485 TSPYL6Q8N831 410 aa13.3□□□□□ -0.28
NEO1-203ENST00000558485 SMARCC1Q92922 1105 aaPredicted RBP13.3□□□□□ -0.28
NEO1-203ENST00000558485 FMNL2Q96PY5 1086 aa13.29□□□□□ -0.28
NEO1-203ENST00000558485 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
NEO1-203ENST00000558485 LOC102724428A0A0B4J2F2 783 aa13.28□□□□□ -0.28
NEO1-203ENST00000558485 ELL2O00472 640 aaPredicted RBP13.28□□□□□ -0.28
NEO1-203ENST00000558485 GIGYF1O75420 1035 aaPredicted RBP13.28□□□□□ -0.28
NEO1-203ENST00000558485 APBA3O96018 575 aa13.28□□□□□ -0.28
NEO1-203ENST00000558485 SIK1P57059 783 aa13.28□□□□□ -0.28
NEO1-203ENST00000558485 RREB1Q92766 1687 aa13.28□□□□□ -0.28
NEO1-203ENST00000558485 VAMP4O75379 141 aa13.27□□□□□ -0.29
NEO1-203ENST00000558485 KCNQ4P56696 695 aa13.27□□□□□ -0.29
NEO1-203ENST00000558485 ITPK1Q13572 414 aa13.27□□□□□ -0.29
NEO1-203ENST00000558485 PLSCR1O15162 318 aa13.26□□□□□ -0.29
NEO1-203ENST00000558485 SNRPA1P09661 255 aaKnown RBP13.26□□□□□ -0.29
NEO1-203ENST00000558485 TWISTNBQ3B726 338 aaPredicted RBP13.26□□□□□ -0.29
NEO1-203ENST00000558485 DNAJC10Q8IXB1 793 aa13.26□□□□□ -0.29
NEO1-203ENST00000558485 VSIG10Q8N0Z9 540 aa13.26□□□□□ -0.29
NEO1-203ENST00000558485 PROM2Q8N271 834 aa13.26□□□□□ -0.29
NEO1-203ENST00000558485 USP16Q9Y5T5 823 aa13.26□□□□□ -0.29
NEO1-203ENST00000558485 ATP6V1AP38606 617 aa13.25□□□□□ -0.29
NEO1-203ENST00000558485 LRRC4BQ9NT99 713 aa13.25□□□□□ -0.29
NEO1-203ENST00000558485 NUP188Q5SRE5 1749 aa13.25□□□□□ -0.29
NEO1-203ENST00000558485 HOXB7P09629 217 aa13.24□□□□□ -0.29
NEO1-203ENST00000558485 TXNRD1Q16881 649 aa13.24□□□□□ -0.29
NEO1-203ENST00000558485 UPF1Q92900 1129 aaKnown RBP eCLIP13.24□□□□□ -0.29
NEO1-203ENST00000558485 CAMKK2Q96RR4 588 aa13.24□□□□□ -0.29
NEO1-203ENST00000558485 CCNL1Q9UK58 526 aaPredicted RBP13.24□□□□□ -0.29
NEO1-203ENST00000558485 C4BP0C0L5 1744 aa13.24□□□□□ -0.29
NEO1-203ENST00000558485 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
NEO1-203ENST00000558485 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
NEO1-203ENST00000558485 EN1Q05925 392 aaPredicted RBP13.23□□□□□ -0.29
NEO1-203ENST00000558485 EZH2Q15910 746 aaKnown RBP13.23□□□□□ -0.29
NEO1-203ENST00000558485 DEFB132Q7Z7B7 95 aa13.23□□□□□ -0.29
NEO1-203ENST00000558485 LINC00116Q8NCU8 138 aa13.23□□□□□ -0.29
NEO1-203ENST00000558485 NECTIN2Q92692 538 aa13.23□□□□□ -0.29
NEO1-203ENST00000558485 MYH14Q7Z406 1995 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms