RNA–Protein interactions for RNA: ENST00000558431.1

SEMA6D-209, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-209ENST00000558431 RREB1Q92766 1687 aa13.55□□□□□ -0.24
SEMA6D-209ENST00000558431 CCDC7Q96M83 1385 aa13.55□□□□□ -0.24
SEMA6D-209ENST00000558431 NUP188Q5SRE5 1749 aa13.54□□□□□ -0.24
SEMA6D-209ENST00000558431 SRCAPQ6ZRS2 3230 aa13.54□□□□□ -0.24
SEMA6D-209ENST00000558431 EXOC5O00471 708 aa13.54□□□□□ -0.24
SEMA6D-209ENST00000558431 COG3Q96JB2 828 aa13.54□□□□□ -0.24
SEMA6D-209ENST00000558431 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.54□□□□□ -0.24
SEMA6D-209ENST00000558431 PARD3Q8TEW0 1356 aa13.54□□□□□ -0.24
SEMA6D-209ENST00000558431 CDCA8Q53HL2 280 aa13.53□□□□□ -0.24
SEMA6D-209ENST00000558431 ZNF710Q8N1W2 664 aa13.53□□□□□ -0.24
SEMA6D-209ENST00000558431 ANKRD24Q8TF21 1146 aa13.53□□□□□ -0.24
SEMA6D-209ENST00000558431 ERBB3P21860 1342 aa13.53□□□□□ -0.24
SEMA6D-209ENST00000558431 ANKRD36BQ8N2N9 1353 aa13.53□□□□□ -0.24
SEMA6D-209ENST00000558431 LRP5O75197 1615 aa13.53□□□□□ -0.24
SEMA6D-209ENST00000558431 KIF20BQ96Q89 1820 aa13.53□□□□□ -0.24
SEMA6D-209ENST00000558431 C2orf72A6NCS6 295 aa13.52□□□□□ -0.25
SEMA6D-209ENST00000558431 POTEMA6NI47 508 aa13.52□□□□□ -0.25
SEMA6D-209ENST00000558431 MARCH10Q8NA82 808 aaPredicted RBP13.52□□□□□ -0.25
SEMA6D-209ENST00000558431 LTV1Q96GA3 475 aaPredicted RBP13.52□□□□□ -0.25
SEMA6D-209ENST00000558431 RGPD2P0DJD1 1756 aa13.51□□□□□ -0.25
SEMA6D-209ENST00000558431 FAM208AQ9UK61 1670 aaKnown RBP13.51□□□□□ -0.25
SEMA6D-209ENST00000558431 DOK7Q18PE1 504 aa13.51□□□□□ -0.25
SEMA6D-209ENST00000558431 LCE2DQ5TA82 110 aaPredicted RBP13.51□□□□□ -0.25
SEMA6D-209ENST00000558431 NBPF14Q5TI25 921 aa13.51□□□□□ -0.25
SEMA6D-209ENST00000558431 POTEGQ6S5H5 508 aa13.51□□□□□ -0.25
SEMA6D-209ENST00000558431 AMPHP49418 695 aa13.5□□□□□ -0.25
SEMA6D-209ENST00000558431 RGPD3A6NKT7 1758 aaPredicted RBP13.5□□□□□ -0.25
SEMA6D-209ENST00000558431 RGPD4Q7Z3J3 1758 aa13.5□□□□□ -0.25
SEMA6D-209ENST00000558431 TNS2Q63HR2 1409 aa13.49□□□□□ -0.25
SEMA6D-209ENST00000558431 IL2RBP14784 551 aa13.49□□□□□ -0.25
SEMA6D-209ENST00000558431 FBLN1P23142 703 aa13.49□□□□□ -0.25
SEMA6D-209ENST00000558431 IP6K1Q92551 441 aa13.49□□□□□ -0.25
SEMA6D-209ENST00000558431 GGNBP2Q9H3C7 697 aa13.49□□□□□ -0.25
SEMA6D-209ENST00000558431 MAP3K19Q56UN5 1328 aa13.48□□□□□ -0.25
SEMA6D-209ENST00000558431 MYOM1P52179 1685 aa13.48□□□□□ -0.25
SEMA6D-209ENST00000558431 RIMBP2O15034 1052 aa13.48□□□□□ -0.25
SEMA6D-209ENST00000558431 PTF1AQ7RTS3 328 aa13.48□□□□□ -0.25
SEMA6D-209ENST00000558431 POLR3GLQ9BT43 218 aa13.48□□□□□ -0.25
SEMA6D-209ENST00000558431 ZNF316A6NFI3 1004 aaPredicted RBP13.47□□□□□ -0.25
SEMA6D-209ENST00000558431 FYB1O15117 783 aa13.47□□□□□ -0.25
SEMA6D-209ENST00000558431 PLSCR1O15162 318 aa13.46□□□□□ -0.25
SEMA6D-209ENST00000558431 HOXB3P14651 431 aaPredicted RBP13.46□□□□□ -0.25
SEMA6D-209ENST00000558431 HOXC9P31274 260 aa13.46□□□□□ -0.25
SEMA6D-209ENST00000558431 RRS1Q15050 365 aaKnown RBP13.46□□□□□ -0.25
SEMA6D-209ENST00000558431 ACSBG1Q96GR2 724 aa13.46□□□□□ -0.25
SEMA6D-209ENST00000558431 NHSQ6T4R5 1651 aa13.46□□□□□ -0.26
SEMA6D-209ENST00000558431 BCL9O00512 1426 aa13.46□□□□□ -0.26
SEMA6D-209ENST00000558431 SPRYD3Q8NCJ5 442 aa13.45□□□□□ -0.26
SEMA6D-209ENST00000558431 BTAF1O14981 1849 aa13.44□□□□□ -0.26
SEMA6D-209ENST00000558431 MAP2P11137 1827 aaKnown RBP13.44□□□□□ -0.26
SEMA6D-209ENST00000558431 KIF3CO14782 793 aa13.44□□□□□ -0.26
SEMA6D-209ENST00000558431 MARVELD3Q96A59 401 aa13.44□□□□□ -0.26
SEMA6D-209ENST00000558431 CFAP44Q96MT7 982 aa13.44□□□□□ -0.26
SEMA6D-209ENST00000558431 KCNQ2O43526 872 aa13.43□□□□□ -0.26
SEMA6D-209ENST00000558431 PAXIP1Q6ZW49 1069 aaPredicted RBP13.43□□□□□ -0.26
SEMA6D-209ENST00000558431 DDX54Q8TDD1 881 aaKnown RBP13.43□□□□□ -0.26
SEMA6D-209ENST00000558431 NSD3Q9BZ95 1437 aa13.43□□□□□ -0.26
SEMA6D-209ENST00000558431 RTL1A6NKG5 1358 aa13.43□□□□□ -0.26
SEMA6D-209ENST00000558431 SMG6Q86US8 1419 aaKnown RBP13.41□□□□□ -0.26
SEMA6D-209ENST00000558431 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.26
SEMA6D-209ENST00000558431 TXNRD1Q16881 649 aa13.41□□□□□ -0.26
SEMA6D-209ENST00000558431 CARD14Q9BXL6 1004 aa13.41□□□□□ -0.26
SEMA6D-209ENST00000558431 DOT1LQ8TEK3 1739 aa13.4□□□□□ -0.26
SEMA6D-209ENST00000558431 EMP3P54852 163 aa13.4□□□□□ -0.26
SEMA6D-209ENST00000558431 USHBP1Q8N6Y0 703 aa13.4□□□□□ -0.26
SEMA6D-209ENST00000558431 ANO8Q9HCE9 1232 aaPredicted RBP13.4□□□□□ -0.26
SEMA6D-209ENST00000558431 SHANK3Q9BYB0 1731 aa13.39□□□□□ -0.27
SEMA6D-209ENST00000558431 PPM1GO15355 546 aaPredicted RBP13.39□□□□□ -0.27
SEMA6D-209ENST00000558431 HSPA5P11021 654 aaKnown RBP13.39□□□□□ -0.27
SEMA6D-209ENST00000558431 GPHNQ9NQX3 736 aaPredicted RBP13.39□□□□□ -0.27
SEMA6D-209ENST00000558431 STK32BQ9NY57 414 aa13.39□□□□□ -0.27
SEMA6D-209ENST00000558431 PPP1R1BQ9UD71 204 aaPredicted RBP13.39□□□□□ -0.27
SEMA6D-209ENST00000558431 FLT4P35916 1363 aa13.39□□□□□ -0.27
SEMA6D-209ENST00000558431 CGNL1Q0VF96 1302 aa13.39□□□□□ -0.27
SEMA6D-209ENST00000558431 HSP90AB2PQ58FF8 381 aa13.38□□□□□ -0.27
SEMA6D-209ENST00000558431 NBPF6Q5VWK0 638 aa13.38□□□□□ -0.27
SEMA6D-209ENST00000558431 ZCRB1Q8TBF4 217 aaKnown RBP13.38□□□□□ -0.27
SEMA6D-209ENST00000558431 RAPGEF4Q8WZA2 1011 aa13.38□□□□□ -0.27
SEMA6D-209ENST00000558431 SYTL4Q96C24 671 aaPredicted RBP13.38□□□□□ -0.27
SEMA6D-209ENST00000558431 NBPF4Q96M43 638 aa13.38□□□□□ -0.27
SEMA6D-209ENST00000558431 SPON1Q9HCB6 807 aa13.38□□□□□ -0.27
SEMA6D-209ENST00000558431 ANKRD26Q9UPS8 1709 aa13.38□□□□□ -0.27
SEMA6D-209ENST00000558431 MEGF6O75095 1541 aa13.38□□□□□ -0.27
SEMA6D-209ENST00000558431 INSRP06213 1382 aa13.37□□□□□ -0.27
SEMA6D-209ENST00000558431 PDE4AP27815 886 aa13.37□□□□□ -0.27
SEMA6D-209ENST00000558431 EMILIN1Q9Y6C2 1016 aa13.37□□□□□ -0.27
SEMA6D-209ENST00000558431 CASZ1Q86V15 1759 aa13.37□□□□□ -0.27
SEMA6D-209ENST00000558431 PLPP6Q8IY26 295 aa13.36□□□□□ -0.27
SEMA6D-209ENST00000558431 KIF24Q5T7B8 1368 aa13.35□□□□□ -0.27
SEMA6D-209ENST00000558431 HOXB1P14653 301 aaPredicted RBP13.35□□□□□ -0.27
SEMA6D-209ENST00000558431 TATP17735 454 aaPredicted RBP13.35□□□□□ -0.27
SEMA6D-209ENST00000558431 PRIM1P49642 420 aaKnown RBP13.35□□□□□ -0.27
SEMA6D-209ENST00000558431 SLC15A2Q16348 729 aa13.35□□□□□ -0.27
SEMA6D-209ENST00000558431 ZBTB7AO95365 584 aa13.34□□□□□ -0.27
SEMA6D-209ENST00000558431 TNNT2P45379 298 aaPredicted RBP13.34□□□□□ -0.27
SEMA6D-209ENST00000558431 FOXK1P85037 733 aa13.34□□□□□ -0.27
SEMA6D-209ENST00000558431 DSG2Q14126 1118 aa13.34□□□□□ -0.27
SEMA6D-209ENST00000558431 PDGFDQ9GZP0 370 aaPredicted RBP13.34□□□□□ -0.27
SEMA6D-209ENST00000558431 ZSWIM6Q9HCJ5 1215 aa13.34□□□□□ -0.27
SEMA6D-209ENST00000558431 ARSIQ5FYB1 569 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms