RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 FCHSD2O94868 740 aa10.43□□□□□ -0.74
RTF1-205ENST00000558298 HMGB2P26583 209 aaKnown RBP10.43□□□□□ -0.74
RTF1-205ENST00000558298 PRIM1P49642 420 aaKnown RBP10.43□□□□□ -0.74
RTF1-205ENST00000558298 HNRNPUQ00839 825 aaKnown RBP eCLIP10.43□□□□□ -0.74
RTF1-205ENST00000558298 NBPF14Q5TI25 921 aa10.43□□□□□ -0.74
RTF1-205ENST00000558298 AEBP1Q8IUX7 1158 aa10.43□□□□□ -0.74
RTF1-205ENST00000558298 UBR2Q8IWV8 1755 aa10.43□□□□□ -0.74
RTF1-205ENST00000558298 DLG5Q8TDM6 1919 aa10.43□□□□□ -0.74
RTF1-205ENST00000558298 SLC15A2Q16348 729 aa10.42□□□□□ -0.74
RTF1-205ENST00000558298 ZNF827Q17R98 1081 aa10.42□□□□□ -0.74
RTF1-205ENST00000558298 SLC27A3Q5K4L6 730 aa10.42□□□□□ -0.74
RTF1-205ENST00000558298 AKT1S1Q96B36 256 aa10.42□□□□□ -0.74
RTF1-205ENST00000558298 DCAF5Q96JK2 942 aa10.42□□□□□ -0.74
RTF1-205ENST00000558298 C4BP0C0L5 1744 aa10.41□□□□□ -0.74
RTF1-205ENST00000558298 COL5A3P25940 1745 aaPredicted RBP10.41□□□□□ -0.74
RTF1-205ENST00000558298 UBR3Q6ZT12 1888 aa10.41□□□□□ -0.74
RTF1-205ENST00000558298 ERVV-2B6SEH9 535 aa10.41□□□□□ -0.74
RTF1-205ENST00000558298 AKAP4Q5JQC9 854 aa10.41□□□□□ -0.74
RTF1-205ENST00000558298 GAS2L2Q8NHY3 880 aa10.41□□□□□ -0.74
RTF1-205ENST00000558298 DDRGK1Q96HY6 314 aa10.41□□□□□ -0.74
RTF1-205ENST00000558298 CCDC136Q96JN2 1154 aa10.41□□□□□ -0.74
RTF1-205ENST00000558298 PDGFDQ9GZP0 370 aaPredicted RBP10.41□□□□□ -0.74
RTF1-205ENST00000558298 CEMIPQ8WUJ3 1361 aa10.4□□□□□ -0.74
RTF1-205ENST00000558298 SGIP1Q9BQI5 828 aa10.4□□□□□ -0.74
RTF1-205ENST00000558298 PALLDQ8WX93 1383 aa10.39□□□□□ -0.75
RTF1-205ENST00000558298 MAP3K5Q99683 1374 aa10.39□□□□□ -0.75
RTF1-205ENST00000558298 PLEKHF1Q96S99 279 aa10.39□□□□□ -0.75
RTF1-205ENST00000558298 PNNQ9H307 717 aaKnown RBP10.39□□□□□ -0.75
RTF1-205ENST00000558298 TJP1Q07157 1748 aa10.38□□□□□ -0.75
RTF1-205ENST00000558298 HTATSF1O43719 755 aaKnown RBP10.38□□□□□ -0.75
RTF1-205ENST00000558298 MS4A1P11836 297 aa10.38□□□□□ -0.75
RTF1-205ENST00000558298 PTGER2P43116 358 aa10.38□□□□□ -0.75
RTF1-205ENST00000558298 C1orf141Q5JVX7 400 aa10.38□□□□□ -0.75
RTF1-205ENST00000558298 ZNF530Q6P9A1 599 aaPredicted RBP10.38□□□□□ -0.75
RTF1-205ENST00000558298 PIGBQ92521 554 aa10.38□□□□□ -0.75
RTF1-205ENST00000558298 STK32BQ9NY57 414 aa10.38□□□□□ -0.75
RTF1-205ENST00000558298 PNPLA7Q6ZV29 1317 aa10.37□□□□□ -0.75
RTF1-205ENST00000558298 TCERG1O14776 1098 aaKnown RBP10.37□□□□□ -0.75
RTF1-205ENST00000558298 U2SURPO15042 1029 aaKnown RBP10.37□□□□□ -0.75
RTF1-205ENST00000558298 HMOX1P09601 288 aa10.37□□□□□ -0.75
RTF1-205ENST00000558298 U2AF1L5P0DN76 240 aaPredicted RBP10.37□□□□□ -0.75
RTF1-205ENST00000558298 PRKAR2BP31323 418 aa10.37□□□□□ -0.75
RTF1-205ENST00000558298 U2AF1Q01081 240 aaKnown RBP eCLIP10.37□□□□□ -0.75
RTF1-205ENST00000558298 MTHFSDQ2M296 383 aaKnown RBP10.37□□□□□ -0.75
RTF1-205ENST00000558298 SMARCC1Q92922 1105 aaPredicted RBP10.37□□□□□ -0.75
RTF1-205ENST00000558298 SYTL4Q96C24 671 aaPredicted RBP10.37□□□□□ -0.75
RTF1-205ENST00000558298 KDM3BQ7LBC6 1761 aa10.37□□□□□ -0.75
RTF1-205ENST00000558298 KCNQ4P56696 695 aa10.36□□□□□ -0.75
RTF1-205ENST00000558298 NCBP3Q53F19 620 aaKnown RBP10.36□□□□□ -0.75
RTF1-205ENST00000558298 KCPQ6ZWJ8 1503 aa10.36□□□□□ -0.75
RTF1-205ENST00000558298 MPRIPQ6WCQ1 1025 aa10.35□□□□□ -0.75
RTF1-205ENST00000558298 SPON1Q9HCB6 807 aa10.35□□□□□ -0.75
RTF1-205ENST00000558298 TMOD3Q9NYL9 352 aa10.35□□□□□ -0.75
RTF1-205ENST00000558298 CCNL1Q9UK58 526 aaPredicted RBP10.35□□□□□ -0.75
RTF1-205ENST00000558298 RNF123Q5XPI4 1314 aa10.34□□□□□ -0.75
RTF1-205ENST00000558298 GNAT3A8MTJ3 354 aa10.34□□□□□ -0.75
RTF1-205ENST00000558298 PHACTR3Q96KR7 559 aa10.34□□□□□ -0.75
RTF1-205ENST00000558298 SLC4A9Q96Q91 983 aa10.34□□□□□ -0.75
RTF1-205ENST00000558298 MTFR1LQ9H019 292 aa10.34□□□□□ -0.75
RTF1-205ENST00000558298 SLC52A2Q9HAB3 445 aa10.34□□□□□ -0.75
RTF1-205ENST00000558298 ATG3Q9NT62 314 aa10.34□□□□□ -0.75
RTF1-205ENST00000558298 MYH14Q7Z406 1995 aaKnown RBP10.34□□□□□ -0.75
RTF1-205ENST00000558298 C4AP0C0L4 1744 aa10.33□□□□□ -0.76
RTF1-205ENST00000558298 RNMTO43148 476 aaKnown RBP10.33□□□□□ -0.76
RTF1-205ENST00000558298 NBR1Q14596 966 aa10.33□□□□□ -0.76
RTF1-205ENST00000558298 AMIGO3Q86WK7 504 aa10.33□□□□□ -0.76
RTF1-205ENST00000558298 ASAP1Q9ULH1 1129 aa10.33□□□□□ -0.76
RTF1-205ENST00000558298 LAMB4A4D0S4 1761 aa10.33□□□□□ -0.76
RTF1-205ENST00000558298 LOC102724428A0A0B4J2F2 783 aa10.32□□□□□ -0.76
RTF1-205ENST00000558298 ZBTB7AO95365 584 aa10.32□□□□□ -0.76
RTF1-205ENST00000558298 NEFMP07197 916 aa10.32□□□□□ -0.76
RTF1-205ENST00000558298 SIK1P57059 783 aa10.32□□□□□ -0.76
RTF1-205ENST00000558298 ITPK1Q13572 414 aa10.32□□□□□ -0.76
RTF1-205ENST00000558298 CNGB1Q14028 1251 aaPredicted RBP10.32□□□□□ -0.76
RTF1-205ENST00000558298 NFE2L2Q16236 605 aa10.32□□□□□ -0.76
RTF1-205ENST00000558298 SLC16A10Q8TF71 515 aa10.32□□□□□ -0.76
RTF1-205ENST00000558298 VSIG10Q8N0Z9 540 aa10.31□□□□□ -0.76
RTF1-205ENST00000558298 FAM43AQ8N2R8 423 aa10.31□□□□□ -0.76
RTF1-205ENST00000558298 LINC00116Q8NCU8 138 aa10.31□□□□□ -0.76
RTF1-205ENST00000558298 IL17REQ8NFR9 667 aa10.31□□□□□ -0.76
RTF1-205ENST00000558298 BABAM1Q9NWV8 329 aa10.31□□□□□ -0.76
RTF1-205ENST00000558298 SALL2Q9Y467 1007 aaPredicted RBP10.31□□□□□ -0.76
RTF1-205ENST00000558298 MAPK8IP3Q9UPT6 1336 aa10.31□□□□□ -0.76
RTF1-205ENST00000558298 CABP4P57796 275 aa10.3□□□□□ -0.76
RTF1-205ENST00000558298 LMOD3Q0VAK6 560 aa10.3□□□□□ -0.76
RTF1-205ENST00000558298 WDR43Q15061 677 aaKnown RBP eCLIP10.3□□□□□ -0.76
RTF1-205ENST00000558298 COL23A1Q86Y22 540 aaPredicted RBP10.3□□□□□ -0.76
RTF1-205ENST00000558298 PNISRQ8TF01 805 aaKnown RBP10.3□□□□□ -0.76
RTF1-205ENST00000558298 RUNDC1Q96C34 613 aa10.3□□□□□ -0.76
RTF1-205ENST00000558298 CNTNAP4Q9C0A0 1308 aa10.3□□□□□ -0.76
RTF1-205ENST00000558298 LGR6Q9HBX8 967 aa10.29□□□□□ -0.76
RTF1-205ENST00000558298 TFCP2L1Q9NZI6 479 aa10.29□□□□□ -0.76
RTF1-205ENST00000558298 ADAMTS8Q9UP79 889 aa10.29□□□□□ -0.76
RTF1-205ENST00000558298 KIAA1551Q9HCM1 1747 aa10.29□□□□□ -0.76
RTF1-205ENST00000558298 KIF13BQ9NQT8 1826 aa10.28□□□□□ -0.76
RTF1-205ENST00000558298 HEG1Q9ULI3 1381 aa10.28□□□□□ -0.76
RTF1-205ENST00000558298 TMPOP42166 694 aaKnown RBP10.28□□□□□ -0.76
RTF1-205ENST00000558298 GSE1Q14687 1217 aa10.28□□□□□ -0.76
RTF1-205ENST00000558298 NGEFQ8N5V2 710 aa10.28□□□□□ -0.76
RTF1-205ENST00000558298 NFATC2IPQ8NCF5 419 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms