RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 C6orf163Q5TEZ5 329 aa13.69□□□□□ -0.22
CSPG4P12-201ENST00000558282 CCDC43Q96MW1 224 aaKnown RBP13.69□□□□□ -0.22
CSPG4P12-201ENST00000558282 CKAP4Q07065 602 aaKnown RBP13.68□□□□□ -0.22
CSPG4P12-201ENST00000558282 CEP112Q8N8E3 955 aa13.68□□□□□ -0.22
CSPG4P12-201ENST00000558282 PPM1EQ8WY54 764 aa13.68□□□□□ -0.22
CSPG4P12-201ENST00000558282 FGD6Q6ZV73 1430 aa13.68□□□□□ -0.22
CSPG4P12-201ENST00000558282 HSF2BPO75031 334 aa13.68□□□□□ -0.22
CSPG4P12-201ENST00000558282 RAI14Q9P0K7 980 aa13.68□□□□□ -0.22
CSPG4P12-201ENST00000558282 MSL1Q68DK7 614 aa13.68□□□□□ -0.22
CSPG4P12-201ENST00000558282 JAKMIP1Q96N16 626 aaKnown RBP13.68□□□□□ -0.22
CSPG4P12-201ENST00000558282 GNG11P61952 73 aa13.67□□□□□ -0.22
CSPG4P12-201ENST00000558282 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
CSPG4P12-201ENST00000558282 CCDC30Q5VVM6 783 aa13.67□□□□□ -0.22
CSPG4P12-201ENST00000558282 TMCO5BA8MYB1 307 aa13.67□□□□□ -0.22
CSPG4P12-201ENST00000558282 VGFO15240 615 aaPredicted RBP13.67□□□□□ -0.22
CSPG4P12-201ENST00000558282 NGDNQ8NEJ9 315 aaKnown RBP13.67□□□□□ -0.22
CSPG4P12-201ENST00000558282 NSRP1Q9H0G5 558 aaKnown RBP13.67□□□□□ -0.22
CSPG4P12-201ENST00000558282 YEATS4O95619 227 aa13.67□□□□□ -0.22
CSPG4P12-201ENST00000558282 ATP2B1P20020 1258 aa13.67□□□□□ -0.22
CSPG4P12-201ENST00000558282 MYCBPQ99417 103 aaPredicted RBP13.67□□□□□ -0.22
CSPG4P12-201ENST00000558282 MYRIPQ8NFW9 859 aa13.67□□□□□ -0.22
CSPG4P12-201ENST00000558282 FAM200AQ8TCP9 573 aa13.67□□□□□ -0.22
CSPG4P12-201ENST00000558282 SPECC1Q5M775 1068 aa13.66□□□□□ -0.22
CSPG4P12-201ENST00000558282 CCDC121Q6ZUS5 278 aa13.66□□□□□ -0.22
CSPG4P12-201ENST00000558282 TMC6Q7Z403 805 aa13.66□□□□□ -0.22
CSPG4P12-201ENST00000558282 POTEDQ86YR6 584 aa13.66□□□□□ -0.22
CSPG4P12-201ENST00000558282 SNX21Q969T3 373 aa13.66□□□□□ -0.22
CSPG4P12-201ENST00000558282 CEP131Q9UPN4 1083 aa13.66□□□□□ -0.22
CSPG4P12-201ENST00000558282 A6NNZ2 444 aa13.66□□□□□ -0.22
CSPG4P12-201ENST00000558282 KIF5BP33176 963 aa13.66□□□□□ -0.22
CSPG4P12-201ENST00000558282 TUBB8Q3ZCM7 444 aa13.66□□□□□ -0.22
CSPG4P12-201ENST00000558282 SKILP12757 684 aa13.66□□□□□ -0.22
CSPG4P12-201ENST00000558282 STK3Q13188 491 aa13.66□□□□□ -0.22
CSPG4P12-201ENST00000558282 CEP57Q86XR8 500 aa13.66□□□□□ -0.22
CSPG4P12-201ENST00000558282 CTAGE15A4D2H0 777 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 CTAGE8P0CG41 777 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 LIG1P18858 919 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 CTAGE6Q86UF2 777 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 CTAGE4Q8IX94 777 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 CCDC12Q8WUD4 166 aaPredicted RBP13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 WASF1Q92558 559 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 GOLGA1Q92805 767 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 C1orf115Q9H7X2 142 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 POLA1P09884 1462 aaPredicted RBP13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 ARAP1Q96P48 1450 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 ERO1AQ96HE7 468 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 ALS2CR12Q96Q35 445 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 RAD54L2Q9Y4B4 1467 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 JPH4Q96JJ6 628 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 CEP63Q96MT8 703 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 HCLS1P14317 486 aaPredicted RBP13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 CCDC50Q8IVM0 306 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 TANGO6Q9C0B7 1094 aa13.65□□□□□ -0.22
CSPG4P12-201ENST00000558282 UTP14CQ5TAP6 766 aaKnown RBP13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 PAXIP1Q6ZW49 1069 aaPredicted RBP13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 NEUROD6Q96NK8 337 aa13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 CCDC113Q9H0I3 377 aa13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 HECW1Q76N89 1606 aa13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 BMP2KLQ5H9B9 411 aa13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 ARFGAP2Q8N6H7 521 aa13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 ANKS4BQ8N8V4 417 aa13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 LIMCH1Q9UPQ0 1083 aa13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 CEP83Q9Y592 693 aa13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 STAMBPO95630 424 aa13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 MTHFSP49914 203 aa13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 TAOK3Q9H2K8 898 aa13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 MCM6Q14566 821 aa13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 KRBA2Q6ZNG9 492 aa13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 CCDC186Q7Z3E2 898 aa13.64□□□□□ -0.23
CSPG4P12-201ENST00000558282 MX1P20591 662 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 SEPT6Q14141 434 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 FMNL3Q8IVF7 1028 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 TTC5Q8N0Z6 440 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 CTCFLQ8NI51 663 aaPredicted RBP13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 CCDC184Q52MB2 194 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 B4GALNT4Q76KP1 1039 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 DAAM2Q86T65 1068 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 FBXO3Q9UK99 471 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 TBC1D2BQ9UPU7 963 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 LRPPRCP42704 1394 aaKnown RBP13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 CKAP2LQ8IYA6 745 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 SWAP70Q9UH65 585 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 TIAM1Q13009 1591 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 HNRNPMP52272 730 aaKnown RBP eCLIP13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 PIP4K2BP78356 416 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 FKBP15Q5T1M5 1219 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 BCCIPQ9P287 314 aaKnown RBP eCLIP13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 CTNNA3Q9UI47 895 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 NESP48681 1621 aa13.63□□□□□ -0.23
CSPG4P12-201ENST00000558282 CASTP20810 708 aaKnown RBP13.62□□□□□ -0.23
CSPG4P12-201ENST00000558282 CCDC57Q2TAC2 916 aa13.62□□□□□ -0.23
CSPG4P12-201ENST00000558282 MAATS1Q7Z4T9 603 aa13.62□□□□□ -0.23
CSPG4P12-201ENST00000558282 FBF1Q8TES7 1133 aa13.62□□□□□ -0.23
CSPG4P12-201ENST00000558282 ZFP91Q96JP5 570 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P12-201ENST00000558282 RBM27Q9P2N5 1060 aaKnown RBP13.62□□□□□ -0.23
CSPG4P12-201ENST00000558282 CETN2P41208 172 aa13.62□□□□□ -0.23
CSPG4P12-201ENST00000558282 NAA25Q14CX7 972 aa13.62□□□□□ -0.23
CSPG4P12-201ENST00000558282 CCDC6Q16204 474 aa13.62□□□□□ -0.23
CSPG4P12-201ENST00000558282 DNAI1Q9UI46 699 aa13.62□□□□□ -0.23
CSPG4P12-201ENST00000558282 MAP2K2P36507 400 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms