RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 TEFQ10587 303 aa13.16□□□□□ -0.3
TPM1-210ENST00000558264 PLEKHM2Q8IWE5 1019 aa13.16□□□□□ -0.3
TPM1-210ENST00000558264 FRAT2O75474 233 aaPredicted RBP13.16□□□□□ -0.3
TPM1-210ENST00000558264 TBC1D9Q6ZT07 1266 aa13.16□□□□□ -0.3
TPM1-210ENST00000558264 RPAP2Q8IXW5 612 aaPredicted RBP13.16□□□□□ -0.3
TPM1-210ENST00000558264 CCT4P50991 539 aaKnown RBP13.16□□□□□ -0.3
TPM1-210ENST00000558264 EXOC6BQ9Y2D4 811 aa13.16□□□□□ -0.3
TPM1-210ENST00000558264 BTBD11A6QL63 1104 aa13.15□□□□□ -0.3
TPM1-210ENST00000558264 CHRNA2Q15822 529 aa13.15□□□□□ -0.3
TPM1-210ENST00000558264 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.3
TPM1-210ENST00000558264 CEMIPQ8WUJ3 1361 aa13.15□□□□□ -0.3
TPM1-210ENST00000558264 EIF4A1P60842 406 aaKnown RBP13.15□□□□□ -0.31
TPM1-210ENST00000558264 PLEKHO1Q53GL0 409 aaPredicted RBP13.15□□□□□ -0.31
TPM1-210ENST00000558264 C1orf141Q5JVX7 400 aa13.15□□□□□ -0.31
TPM1-210ENST00000558264 TSHZ3Q63HK5 1081 aa13.15□□□□□ -0.31
TPM1-210ENST00000558264 FAM208AQ9UK61 1670 aaKnown RBP13.14□□□□□ -0.31
TPM1-210ENST00000558264 PRAMEF22A3QJZ6 481 aa13.14□□□□□ -0.31
TPM1-210ENST00000558264 KCNA4P22459 653 aa13.14□□□□□ -0.31
TPM1-210ENST00000558264 AKAP4Q5JQC9 854 aa13.14□□□□□ -0.31
TPM1-210ENST00000558264 PNMA6EA0A0J9YXQ4 647 aa13.14□□□□□ -0.31
TPM1-210ENST00000558264 NLRP2Q9NX02 1062 aa13.14□□□□□ -0.31
TPM1-210ENST00000558264 GNAI2P04899 355 aa13.13□□□□□ -0.31
TPM1-210ENST00000558264 SLIT3O75094 1523 aa13.13□□□□□ -0.31
TPM1-210ENST00000558264 LRRFIP2Q9Y608 721 aaKnown RBP13.13□□□□□ -0.31
TPM1-210ENST00000558264 RNMTO43148 476 aaKnown RBP13.12□□□□□ -0.31
TPM1-210ENST00000558264 TRPM3Q9HCF6 1732 aaPredicted RBP13.12□□□□□ -0.31
TPM1-210ENST00000558264 MST1RQ04912 1400 aa13.12□□□□□ -0.31
TPM1-210ENST00000558264 STRCP1A6NGW2 1772 aa13.12□□□□□ -0.31
TPM1-210ENST00000558264 RGPD5Q99666 1765 aa13.11□□□□□ -0.31
TPM1-210ENST00000558264 ERBB3P21860 1342 aa13.11□□□□□ -0.31
TPM1-210ENST00000558264 CSB-PGBD3P0DP91 1061 aa13.11□□□□□ -0.31
TPM1-210ENST00000558264 TTC22Q5TAA0 569 aa13.11□□□□□ -0.31
TPM1-210ENST00000558264 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
TPM1-210ENST00000558264 MED1Q15648 1581 aaPredicted RBP13.1□□□□□ -0.31
TPM1-210ENST00000558264 HMMRO75330 724 aa13.1□□□□□ -0.31
TPM1-210ENST00000558264 CDC45O75419 566 aa13.1□□□□□ -0.31
TPM1-210ENST00000558264 PROSER3Q2NL68 480 aa13.1□□□□□ -0.31
TPM1-210ENST00000558264 USP44Q9H0E7 712 aa13.1□□□□□ -0.31
TPM1-210ENST00000558264 PI4KAP2A4QPH2 592 aa13.1□□□□□ -0.31
TPM1-210ENST00000558264 SLC39A6Q13433 755 aa13.1□□□□□ -0.31
TPM1-210ENST00000558264 AMOTQ4VCS5 1084 aa13.1□□□□□ -0.31
TPM1-210ENST00000558264 PI4KAP1Q8N8J0 262 aa13.1□□□□□ -0.31
TPM1-210ENST00000558264 USP35Q9P2H5 1018 aa13.1□□□□□ -0.31
TPM1-210ENST00000558264 SDSP20132 328 aa13.09□□□□□ -0.31
TPM1-210ENST00000558264 UBTFL1P0CB47 393 aaPredicted RBP13.09□□□□□ -0.31
TPM1-210ENST00000558264 BABAM1Q9NWV8 329 aa13.09□□□□□ -0.31
TPM1-210ENST00000558264 GNAI3P08754 354 aa13.08□□□□□ -0.31
TPM1-210ENST00000558264 RAPGEF4Q8WZA2 1011 aa13.08□□□□□ -0.31
TPM1-210ENST00000558264 ANTXR1Q9H6X2 564 aa13.08□□□□□ -0.31
TPM1-210ENST00000558264 CD2BP2O95400 341 aaKnown RBP13.08□□□□□ -0.32
TPM1-210ENST00000558264 NBPF7P0C2Y1 421 aaPredicted RBP13.08□□□□□ -0.32
TPM1-210ENST00000558264 RBM25P49756 843 aaKnown RBP13.08□□□□□ -0.32
TPM1-210ENST00000558264 FOXD4L1Q9NU39 408 aa13.08□□□□□ -0.32
TPM1-210ENST00000558264 PHRF1Q9P1Y6 1649 aaKnown RBP13.07□□□□□ -0.32
TPM1-210ENST00000558264 HSCBQ8IWL3 235 aa13.07□□□□□ -0.32
TPM1-210ENST00000558264 KIF2CQ99661 725 aa13.07□□□□□ -0.32
TPM1-210ENST00000558264 SRCIN1Q9C0H9 1055 aa13.07□□□□□ -0.32
TPM1-210ENST00000558264 IL1RAPL2Q9NP60 686 aa13.07□□□□□ -0.32
TPM1-210ENST00000558264 KIF1AQ12756 1690 aa13.06□□□□□ -0.32
TPM1-210ENST00000558264 AIMP1Q12904 312 aaKnown RBP13.06□□□□□ -0.32
TPM1-210ENST00000558264 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
TPM1-210ENST00000558264 LMO7Q8WWI1 1683 aa13.06□□□□□ -0.32
TPM1-210ENST00000558264 PIP4K2AP48426 406 aaPredicted RBP13.06□□□□□ -0.32
TPM1-210ENST00000558264 ATP8B2P98198 1209 aa13.06□□□□□ -0.32
TPM1-210ENST00000558264 DNAAF4Q8WXU2 420 aa13.06□□□□□ -0.32
TPM1-210ENST00000558264 NPHP3Q7Z494 1330 aa13.06□□□□□ -0.32
TPM1-210ENST00000558264 GIGYF1O75420 1035 aaPredicted RBP13.06□□□□□ -0.32
TPM1-210ENST00000558264 LRRCC1Q9C099 1032 aa13.06□□□□□ -0.32
TPM1-210ENST00000558264 ALS2Q96Q42 1657 aa13.05□□□□□ -0.32
TPM1-210ENST00000558264 KDM3BQ7LBC6 1761 aa13.05□□□□□ -0.32
TPM1-210ENST00000558264 PDE1AP54750 535 aa13.05□□□□□ -0.32
TPM1-210ENST00000558264 NFATC2IPQ8NCF5 419 aa13.05□□□□□ -0.32
TPM1-210ENST00000558264 NCAPD2Q15021 1401 aa13.05□□□□□ -0.32
TPM1-210ENST00000558264 PPP1R42Q7Z4L9 355 aa13.05□□□□□ -0.32
TPM1-210ENST00000558264 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
TPM1-210ENST00000558264 MEGF6O75095 1541 aa13.04□□□□□ -0.32
TPM1-210ENST00000558264 ADCY9O60503 1353 aa13.04□□□□□ -0.32
TPM1-210ENST00000558264 TATP17735 454 aaPredicted RBP13.04□□□□□ -0.32
TPM1-210ENST00000558264 CWF19L2Q2TBE0 894 aaKnown RBP13.04□□□□□ -0.32
TPM1-210ENST00000558264 BEND3Q5T5X7 828 aa13.04□□□□□ -0.32
TPM1-210ENST00000558264 MAP3K2Q9Y2U5 619 aa13.04□□□□□ -0.32
TPM1-210ENST00000558264 MYL6BP14649 208 aa13.04□□□□□ -0.32
TPM1-210ENST00000558264 NUTM1Q86Y26 1132 aa13.04□□□□□ -0.32
TPM1-210ENST00000558264 DBF4Q9UBU7 674 aaPredicted RBP13.04□□□□□ -0.32
TPM1-210ENST00000558264 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
TPM1-210ENST00000558264 SURF6O75683 361 aaKnown RBP13.03□□□□□ -0.32
TPM1-210ENST00000558264 BRINP3Q76B58 766 aa13.03□□□□□ -0.32
TPM1-210ENST00000558264 ZNF335Q9H4Z2 1342 aaPredicted RBP13.03□□□□□ -0.32
TPM1-210ENST00000558264 HSP90AB1P08238 724 aaKnown RBP13.03□□□□□ -0.32
TPM1-210ENST00000558264 TNS3Q68CZ2 1445 aa13.02□□□□□ -0.32
TPM1-210ENST00000558264 MAP4K4O95819 1239 aaPredicted RBP13.02□□□□□ -0.32
TPM1-210ENST00000558264 HOXB7P09629 217 aa13.02□□□□□ -0.32
TPM1-210ENST00000558264 PHKG2P15735 406 aa13.02□□□□□ -0.32
TPM1-210ENST00000558264 RILPL2Q969X0 211 aa13.02□□□□□ -0.32
TPM1-210ENST00000558264 SPATA31A3Q5VYP0 1347 aa13.02□□□□□ -0.32
TPM1-210ENST00000558264 IBTKQ9P2D0 1353 aaPredicted RBP13.02□□□□□ -0.33
TPM1-210ENST00000558264 KDM6AO15550 1401 aaPredicted RBP13.02□□□□□ -0.33
TPM1-210ENST00000558264 TRIM6-TRIM34B2RNG4 842 aa13.02□□□□□ -0.33
TPM1-210ENST00000558264 MX1P20591 662 aa13.02□□□□□ -0.33
TPM1-210ENST00000558264 CYP27B1O15528 508 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms