RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 EMILIN1Q9Y6C2 1016 aa16.26■□□□□ 0.19
HMGB1P8-201ENST00000558211 CPDO75976 1380 aa16.25■□□□□ 0.19
HMGB1P8-201ENST00000558211 EMP3P54852 163 aa16.24■□□□□ 0.19
HMGB1P8-201ENST00000558211 BTG4Q9NY30 223 aa16.24■□□□□ 0.19
HMGB1P8-201ENST00000558211 POLKQ9UBT6 870 aa16.24■□□□□ 0.19
HMGB1P8-201ENST00000558211 RGPD5Q99666 1765 aa16.23■□□□□ 0.19
HMGB1P8-201ENST00000558211 AFF2P51816 1311 aa16.23■□□□□ 0.19
HMGB1P8-201ENST00000558211 TESPA1A2RU30 521 aaPredicted RBP16.23■□□□□ 0.19
HMGB1P8-201ENST00000558211 EVA1CP58658 441 aa16.23■□□□□ 0.19
HMGB1P8-201ENST00000558211 LTV1Q96GA3 475 aaPredicted RBP16.23■□□□□ 0.19
HMGB1P8-201ENST00000558211 STRN4Q9NRL3 753 aa16.23■□□□□ 0.19
HMGB1P8-201ENST00000558211 AXIN2Q9Y2T1 843 aa16.23■□□□□ 0.19
HMGB1P8-201ENST00000558211 COL14A1Q05707 1796 aaKnown RBP16.23■□□□□ 0.19
HMGB1P8-201ENST00000558211 USP21Q9UK80 565 aa16.22■□□□□ 0.19
HMGB1P8-201ENST00000558211 AATKQ6ZMQ8 1374 aa16.22■□□□□ 0.19
HMGB1P8-201ENST00000558211 PLCH1Q4KWH8 1693 aa16.21■□□□□ 0.19
HMGB1P8-201ENST00000558211 ANP32CO43423 234 aa16.21■□□□□ 0.19
HMGB1P8-201ENST00000558211 PPP2R1AP30153 589 aa16.21■□□□□ 0.19
HMGB1P8-201ENST00000558211 HOXC9P31274 260 aa16.21■□□□□ 0.19
HMGB1P8-201ENST00000558211 MLLT3P42568 568 aaPredicted RBP16.21■□□□□ 0.19
HMGB1P8-201ENST00000558211 MTHFSP49914 203 aa16.21■□□□□ 0.19
HMGB1P8-201ENST00000558211 RALBP1Q15311 655 aa16.21■□□□□ 0.19
HMGB1P8-201ENST00000558211 IP6K1Q92551 441 aa16.21■□□□□ 0.19
HMGB1P8-201ENST00000558211 COL18A1P39060 1754 aa16.21■□□□□ 0.18
HMGB1P8-201ENST00000558211 CSB-PGBD3P0DP91 1061 aa16.2■□□□□ 0.18
HMGB1P8-201ENST00000558211 FOSBP53539 338 aa16.2■□□□□ 0.18
HMGB1P8-201ENST00000558211 HSP90AB2PQ58FF8 381 aa16.2■□□□□ 0.18
HMGB1P8-201ENST00000558211 PRKRIP1Q9H875 184 aaPredicted RBP16.2■□□□□ 0.18
HMGB1P8-201ENST00000558211 PARD3Q8TEW0 1356 aa16.2■□□□□ 0.18
HMGB1P8-201ENST00000558211 CAMTA1Q9Y6Y1 1673 aa16.2■□□□□ 0.18
HMGB1P8-201ENST00000558211 PEAK1Q9H792 1746 aa16.19■□□□□ 0.18
HMGB1P8-201ENST00000558211 DIEXFQ68CQ4 756 aaKnown RBP16.19■□□□□ 0.18
HMGB1P8-201ENST00000558211 FNBP4Q8N3X1 1017 aaPredicted RBP16.19■□□□□ 0.18
HMGB1P8-201ENST00000558211 DDX12PQ92771 950 aa16.19■□□□□ 0.18
HMGB1P8-201ENST00000558211 CCDC9Q9Y3X0 531 aaKnown RBP16.19■□□□□ 0.18
HMGB1P8-201ENST00000558211 FLT4P35916 1363 aa16.18■□□□□ 0.18
HMGB1P8-201ENST00000558211 PHF14O94880 888 aa16.18■□□□□ 0.18
HMGB1P8-201ENST00000558211 UNC5CLQ8IV45 518 aa16.18■□□□□ 0.18
HMGB1P8-201ENST00000558211 ANKRD24Q8TF21 1146 aa16.18■□□□□ 0.18
HMGB1P8-201ENST00000558211 PCDHGA10Q9Y5H3 936 aa16.18■□□□□ 0.18
HMGB1P8-201ENST00000558211 SLIT2O94813 1529 aa16.18■□□□□ 0.18
HMGB1P8-201ENST00000558211 LMO7Q8WWI1 1683 aa16.18■□□□□ 0.18
HMGB1P8-201ENST00000558211 POTEB3A0JP26 581 aa16.17■□□□□ 0.18
HMGB1P8-201ENST00000558211 PSDA5PKW4 1024 aaPredicted RBP16.17■□□□□ 0.18
HMGB1P8-201ENST00000558211 POTEBQ6S5H4 581 aa16.17■□□□□ 0.18
HMGB1P8-201ENST00000558211 ERBB3P21860 1342 aa16.17■□□□□ 0.18
HMGB1P8-201ENST00000558211 NWD2Q9ULI1 1742 aa16.16■□□□□ 0.18
HMGB1P8-201ENST00000558211 RTL1A6NKG5 1358 aa16.16■□□□□ 0.18
HMGB1P8-201ENST00000558211 LARP1Q6PKG0 1096 aaKnown RBP16.16■□□□□ 0.18
HMGB1P8-201ENST00000558211 BCL9LQ86UU0 1499 aa16.16■□□□□ 0.18
HMGB1P8-201ENST00000558211 FAM205CA6NFA0 338 aa16.15■□□□□ 0.18
HMGB1P8-201ENST00000558211 ZNF772Q68DY9 489 aaPredicted RBP16.15■□□□□ 0.18
HMGB1P8-201ENST00000558211 TOM1L2Q6ZVM7 507 aa16.15■□□□□ 0.18
HMGB1P8-201ENST00000558211 QTRT2Q9H974 415 aaKnown RBP16.15■□□□□ 0.18
HMGB1P8-201ENST00000558211 USP35Q9P2H5 1018 aa16.15■□□□□ 0.18
HMGB1P8-201ENST00000558211 COL5A2P05997 1499 aaPredicted RBP16.15■□□□□ 0.18
HMGB1P8-201ENST00000558211 MYBBP1AQ9BQG0 1328 aaKnown RBP16.15■□□□□ 0.18
HMGB1P8-201ENST00000558211 INSRP06213 1382 aa16.14■□□□□ 0.17
HMGB1P8-201ENST00000558211 NRAPQ86VF7 1730 aa16.14■□□□□ 0.17
HMGB1P8-201ENST00000558211 BLMP54132 1417 aaPredicted RBP16.14■□□□□ 0.17
HMGB1P8-201ENST00000558211 VARS2Q5ST30 1063 aaKnown RBP16.14■□□□□ 0.17
HMGB1P8-201ENST00000558211 ZNF454Q8N9F8 522 aa16.14■□□□□ 0.17
HMGB1P8-201ENST00000558211 NLRP2Q9NX02 1062 aa16.14■□□□□ 0.17
HMGB1P8-201ENST00000558211 RGS17Q9UGC6 210 aaPredicted RBP16.14■□□□□ 0.17
HMGB1P8-201ENST00000558211 KIF24Q5T7B8 1368 aa16.13■□□□□ 0.17
HMGB1P8-201ENST00000558211 GRXCR2A6NFK2 248 aa16.13■□□□□ 0.17
HMGB1P8-201ENST00000558211 CFAP53Q96M91 514 aa16.13■□□□□ 0.17
HMGB1P8-201ENST00000558211 HS3ST6Q96QI5 342 aa16.13■□□□□ 0.17
HMGB1P8-201ENST00000558211 TRPC5Q9UL62 973 aaPredicted RBP16.13■□□□□ 0.17
HMGB1P8-201ENST00000558211 WDR17Q8IZU2 1322 aa16.13■□□□□ 0.17
HMGB1P8-201ENST00000558211 SMG6Q86US8 1419 aaKnown RBP16.12■□□□□ 0.17
HMGB1P8-201ENST00000558211 CDK12Q9NYV4 1490 aaPredicted RBP16.12■□□□□ 0.17
HMGB1P8-201ENST00000558211 OSBPP22059 807 aa16.12■□□□□ 0.17
HMGB1P8-201ENST00000558211 EIF4A2Q14240 407 aaKnown RBP16.12■□□□□ 0.17
HMGB1P8-201ENST00000558211 EPAS1Q99814 870 aa16.12■□□□□ 0.17
HMGB1P8-201ENST00000558211 ABCC6O95255 1503 aa16.12■□□□□ 0.17
HMGB1P8-201ENST00000558211 RGPD2P0DJD1 1756 aa16.12■□□□□ 0.17
HMGB1P8-201ENST00000558211 DIAPH1O60610 1272 aaKnown RBP16.11■□□□□ 0.17
HMGB1P8-201ENST00000558211 VPS72Q15906 364 aa16.11■□□□□ 0.17
HMGB1P8-201ENST00000558211 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.11■□□□□ 0.17
HMGB1P8-201ENST00000558211 PRIM1P49642 420 aaKnown RBP16.1■□□□□ 0.17
HMGB1P8-201ENST00000558211 PPP4R3BQ5MIZ7 849 aa16.1■□□□□ 0.17
HMGB1P8-201ENST00000558211 TYW1BQ6NUM6 668 aa16.1■□□□□ 0.17
HMGB1P8-201ENST00000558211 POTEAQ6S8J7 498 aa16.1■□□□□ 0.17
HMGB1P8-201ENST00000558211 USHBP1Q8N6Y0 703 aa16.1■□□□□ 0.17
HMGB1P8-201ENST00000558211 U2SURPO15042 1029 aaKnown RBP16.09■□□□□ 0.17
HMGB1P8-201ENST00000558211 NBPF6Q5VWK0 638 aa16.09■□□□□ 0.17
HMGB1P8-201ENST00000558211 GJD4Q96KN9 370 aaPredicted RBP16.09■□□□□ 0.17
HMGB1P8-201ENST00000558211 NBPF4Q96M43 638 aa16.09■□□□□ 0.17
HMGB1P8-201ENST00000558211 SPATA31A5Q5VU36 1347 aa16.09■□□□□ 0.17
HMGB1P8-201ENST00000558211 SPATA31A7Q8IWB4 1347 aa16.09■□□□□ 0.17
HMGB1P8-201ENST00000558211 ATRNO75882 1429 aa16.09■□□□□ 0.17
HMGB1P8-201ENST00000558211 CRB1P82279 1406 aa16.09■□□□□ 0.17
HMGB1P8-201ENST00000558211 IL13P35225 146 aa16.08■□□□□ 0.16
HMGB1P8-201ENST00000558211 FBXW7Q969H0 707 aa16.08■□□□□ 0.16
HMGB1P8-201ENST00000558211 ZDHHC16Q969W1 377 aa16.08■□□□□ 0.16
HMGB1P8-201ENST00000558211 EYA1Q99502 592 aa16.08■□□□□ 0.16
HMGB1P8-201ENST00000558211 CARD10Q9BWT7 1032 aa16.08■□□□□ 0.16
HMGB1P8-201ENST00000558211 SPATA31A1Q5TZJ5 1347 aa16.08■□□□□ 0.16
HMGB1P8-201ENST00000558211 A0A0G2JS52 829 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms