RNA–Protein interactions for RNA: ENST00000558170.6

ZEB2-225, Transcript of zinc finger E-box binding homeobox 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZEB2, Length 4,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-225ENST00000558170 PLXNC1O60486 1568 aa17.79■□□□□ 0.44
ZEB2-225ENST00000558170 LETM1O95202 739 aaPredicted RBP17.78■□□□□ 0.44
ZEB2-225ENST00000558170 YTHDC2Q9H6S0 1430 aaKnown RBP17.78■□□□□ 0.44
ZEB2-225ENST00000558170 MYOM2P54296 1465 aa17.78■□□□□ 0.44
ZEB2-225ENST00000558170 CEBPAP49715 358 aaPredicted RBP17.78■□□□□ 0.44
ZEB2-225ENST00000558170 CAMK4Q16566 473 aa17.78■□□□□ 0.44
ZEB2-225ENST00000558170 USHBP1Q8N6Y0 703 aa17.78■□□□□ 0.44
ZEB2-225ENST00000558170 SF3A1Q15459 793 aaKnown RBP17.77■□□□□ 0.44
ZEB2-225ENST00000558170 PRPF40BQ6NWY9 871 aaKnown RBP17.77■□□□□ 0.44
ZEB2-225ENST00000558170 PDRG1Q9NUG6 133 aa17.77■□□□□ 0.44
ZEB2-225ENST00000558170 ABCC4O15439 1325 aa17.77■□□□□ 0.44
ZEB2-225ENST00000558170 USP48Q86UV5 1035 aa17.77■□□□□ 0.44
ZEB2-225ENST00000558170 TMEM63CQ9P1W3 806 aa17.77■□□□□ 0.44
ZEB2-225ENST00000558170 CCDC183Q5T5S1 534 aa17.76■□□□□ 0.43
ZEB2-225ENST00000558170 GNAT3A8MTJ3 354 aa17.76■□□□□ 0.43
ZEB2-225ENST00000558170 CCDC192P0DO97 292 aa17.76■□□□□ 0.43
ZEB2-225ENST00000558170 CSB-PGBD3P0DP91 1061 aa17.76■□□□□ 0.43
ZEB2-225ENST00000558170 ZNF445P59923 1031 aa17.76■□□□□ 0.43
ZEB2-225ENST00000558170 ADCY5O95622 1261 aa17.76■□□□□ 0.43
ZEB2-225ENST00000558170 ANXA1P04083 346 aa17.76■□□□□ 0.43
ZEB2-225ENST00000558170 TTC12Q9H892 705 aaPredicted RBP17.76■□□□□ 0.43
ZEB2-225ENST00000558170 CNPY2Q9Y2B0 182 aa17.76■□□□□ 0.43
ZEB2-225ENST00000558170 ZFYVE9O95405 1425 aa17.75■□□□□ 0.43
ZEB2-225ENST00000558170 GNL2Q13823 731 aaKnown RBP17.75■□□□□ 0.43
ZEB2-225ENST00000558170 TAF7Q15545 349 aaPredicted RBP17.75■□□□□ 0.43
ZEB2-225ENST00000558170 LAMC1P11047 1609 aa17.75■□□□□ 0.43
ZEB2-225ENST00000558170 ACEP12821 1306 aa17.75■□□□□ 0.43
ZEB2-225ENST00000558170 GIMAP6Q6P9H5 292 aa17.75■□□□□ 0.43
ZEB2-225ENST00000558170 PPP1R42Q7Z4L9 355 aa17.75■□□□□ 0.43
ZEB2-225ENST00000558170 KIF1BPQ96EK5 621 aa17.75■□□□□ 0.43
ZEB2-225ENST00000558170 KRT85P78386 507 aa17.75■□□□□ 0.43
ZEB2-225ENST00000558170 NEXNQ0ZGT2 675 aa17.75■□□□□ 0.43
ZEB2-225ENST00000558170 RIMS2Q9UQ26 1411 aa17.74■□□□□ 0.43
ZEB2-225ENST00000558170 AACSQ86V21 672 aa17.74■□□□□ 0.43
ZEB2-225ENST00000558170 LIMCH1Q9UPQ0 1083 aa17.74■□□□□ 0.43
ZEB2-225ENST00000558170 STX6O43752 255 aa17.74■□□□□ 0.43
ZEB2-225ENST00000558170 GORABQ5T7V8 394 aa17.74■□□□□ 0.43
ZEB2-225ENST00000558170 RIC3Q7Z5B4 369 aa17.73■□□□□ 0.43
ZEB2-225ENST00000558170 TNMDQ9H2S6 317 aa17.73■□□□□ 0.43
ZEB2-225ENST00000558170 MTHFSDQ2M296 383 aaKnown RBP17.73■□□□□ 0.43
ZEB2-225ENST00000558170 NOL7Q9UMY1 257 aaKnown RBP17.73■□□□□ 0.43
ZEB2-225ENST00000558170 ZCCHC11Q5TAX3 1644 aaKnown RBP17.73■□□□□ 0.43
ZEB2-225ENST00000558170 CHMLP26374 656 aa17.72■□□□□ 0.43
ZEB2-225ENST00000558170 PSMA5P28066 241 aa17.72■□□□□ 0.43
ZEB2-225ENST00000558170 MAP3K4Q9Y6R4 1608 aa17.72■□□□□ 0.43
ZEB2-225ENST00000558170 PDCP20941 246 aa17.72■□□□□ 0.43
ZEB2-225ENST00000558170 CKAP2LQ8IYA6 745 aa17.72■□□□□ 0.43
ZEB2-225ENST00000558170 GPT2Q8TD30 523 aa17.72■□□□□ 0.43
ZEB2-225ENST00000558170 PPP1R9BQ96SB3 815 aa17.72■□□□□ 0.43
ZEB2-225ENST00000558170 KIF3AQ9Y496 699 aa17.72■□□□□ 0.43
ZEB2-225ENST00000558170 CPA1P15085 419 aa17.71■□□□□ 0.43
ZEB2-225ENST00000558170 MCM5P33992 734 aa17.71■□□□□ 0.43
ZEB2-225ENST00000558170 ZFYVE16Q7Z3T8 1539 aa17.71■□□□□ 0.43
ZEB2-225ENST00000558170 DDX58O95786 925 aaKnown RBP17.71■□□□□ 0.43
ZEB2-225ENST00000558170 KIF2CQ99661 725 aa17.71■□□□□ 0.43
ZEB2-225ENST00000558170 NUP62CLQ9H1M0 184 aa17.71■□□□□ 0.43
ZEB2-225ENST00000558170 TTC21BQ7Z4L5 1316 aa17.71■□□□□ 0.43
ZEB2-225ENST00000558170 BLOC1S2Q6QNY1 142 aa17.71■□□□□ 0.43
ZEB2-225ENST00000558170 TCEANC2Q96MN5 208 aa17.71■□□□□ 0.43
ZEB2-225ENST00000558170 PSME1Q06323 249 aa17.7■□□□□ 0.42
ZEB2-225ENST00000558170 TFIP11Q9UBB9 837 aaKnown RBP17.7■□□□□ 0.42
ZEB2-225ENST00000558170 CHL1O00533 1208 aa17.7■□□□□ 0.42
ZEB2-225ENST00000558170 GJB2P29033 226 aa17.7■□□□□ 0.42
ZEB2-225ENST00000558170 TPD52L1Q16890 204 aaPredicted RBP17.7■□□□□ 0.42
ZEB2-225ENST00000558170 ZNF771Q7L3S4 317 aaPredicted RBP17.7■□□□□ 0.42
ZEB2-225ENST00000558170 RHPN1Q8TCX5 695 aa17.7■□□□□ 0.42
ZEB2-225ENST00000558170 DNAJC2Q99543 621 aaKnown RBP17.7■□□□□ 0.42
ZEB2-225ENST00000558170 RAB11FIP3O75154 756 aa17.7■□□□□ 0.42
ZEB2-225ENST00000558170 GLRX3O76003 335 aaKnown RBP17.7■□□□□ 0.42
ZEB2-225ENST00000558170 CBX1P83916 185 aa17.7■□□□□ 0.42
ZEB2-225ENST00000558170 NECAB1Q8N987 351 aa17.7■□□□□ 0.42
ZEB2-225ENST00000558170 PALD1Q9ULE6 856 aa17.7■□□□□ 0.42
ZEB2-225ENST00000558170 PNMA6EA0A0J9YXQ4 647 aa17.69■□□□□ 0.42
ZEB2-225ENST00000558170 ATP8B2P98198 1209 aa17.69■□□□□ 0.42
ZEB2-225ENST00000558170 HS1BP3Q53T59 392 aa17.69■□□□□ 0.42
ZEB2-225ENST00000558170 ZNF530Q6P9A1 599 aaPredicted RBP17.69■□□□□ 0.42
ZEB2-225ENST00000558170 FAM177BA6PVY3 158 aa17.69■□□□□ 0.42
ZEB2-225ENST00000558170 GADD45BO75293 160 aaPredicted RBP17.69■□□□□ 0.42
ZEB2-225ENST00000558170 SPATA32Q96LK8 384 aa17.69■□□□□ 0.42
ZEB2-225ENST00000558170 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.69■□□□□ 0.42
ZEB2-225ENST00000558170 CCDC73Q6ZRK6 1079 aa17.69■□□□□ 0.42
ZEB2-225ENST00000558170 PI4KAP2A4QPH2 592 aa17.69■□□□□ 0.42
ZEB2-225ENST00000558170 ZSCAN22P10073 491 aaPredicted RBP17.69■□□□□ 0.42
ZEB2-225ENST00000558170 PI4KAP1Q8N8J0 262 aa17.69■□□□□ 0.42
ZEB2-225ENST00000558170 NEUROD6Q96NK8 337 aa17.69■□□□□ 0.42
ZEB2-225ENST00000558170 NPHP1O15259 732 aa17.68■□□□□ 0.42
ZEB2-225ENST00000558170 DDX11Q96FC9 970 aa17.68■□□□□ 0.42
ZEB2-225ENST00000558170 CCDC8Q9H0W5 538 aaPredicted RBP17.68■□□□□ 0.42
ZEB2-225ENST00000558170 BOLA2Q9H3K6 86 aa17.68■□□□□ 0.42
ZEB2-225ENST00000558170 SPHKAPQ2M3C7 1700 aa17.68■□□□□ 0.42
ZEB2-225ENST00000558170 KIF1BO60333 1816 aa17.68■□□□□ 0.42
ZEB2-225ENST00000558170 ANAPC15P60006 121 aa17.68■□□□□ 0.42
ZEB2-225ENST00000558170 MAP3K11Q16584 847 aa17.68■□□□□ 0.42
ZEB2-225ENST00000558170 DYNC1I1O14576 645 aa17.68■□□□□ 0.42
ZEB2-225ENST00000558170 UBE2HP62256 183 aa17.68■□□□□ 0.42
ZEB2-225ENST00000558170 C17orf53Q8N3J3 647 aaPredicted RBP17.68■□□□□ 0.42
ZEB2-225ENST00000558170 TET3O43151 1660 aa17.67■□□□□ 0.42
ZEB2-225ENST00000558170 RTL1A6NKG5 1358 aa17.67■□□□□ 0.42
ZEB2-225ENST00000558170 TPM3P06753 285 aa17.67■□□□□ 0.42
ZEB2-225ENST00000558170 DNM1Q05193 864 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms