RNA–Protein interactions for RNA: ENST00000558099.1

CSHL1-207, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2

Gene CSHL1, Length 1,590 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-207ENST00000558099 AMIGO3Q86WK7 504 aa17.74■□□□□ 0.43
CSHL1-207ENST00000558099 SMARCC1Q92922 1105 aaPredicted RBP17.74■□□□□ 0.43
CSHL1-207ENST00000558099 COL3A1P02461 1466 aaPredicted RBP17.73■□□□□ 0.43
CSHL1-207ENST00000558099 ERVV-2B6SEH9 535 aa17.73■□□□□ 0.43
CSHL1-207ENST00000558099 ANP32AP39687 249 aaKnown RBP17.73■□□□□ 0.43
CSHL1-207ENST00000558099 AMOTQ4VCS5 1084 aa17.73■□□□□ 0.43
CSHL1-207ENST00000558099 COL23A1Q86Y22 540 aaPredicted RBP17.73■□□□□ 0.43
CSHL1-207ENST00000558099 ATG3Q9NT62 314 aa17.73■□□□□ 0.43
CSHL1-207ENST00000558099 ASAP1Q9ULH1 1129 aa17.73■□□□□ 0.43
CSHL1-207ENST00000558099 C5P01031 1676 aa17.73■□□□□ 0.43
CSHL1-207ENST00000558099 PLEKHO1Q53GL0 409 aaPredicted RBP17.72■□□□□ 0.43
CSHL1-207ENST00000558099 SULT6B1Q6IMI4 303 aa17.72■□□□□ 0.43
CSHL1-207ENST00000558099 DCAF5Q96JK2 942 aa17.72■□□□□ 0.43
CSHL1-207ENST00000558099 SYT17Q9BSW7 474 aa17.72■□□□□ 0.43
CSHL1-207ENST00000558099 TFCP2L1Q9NZI6 479 aa17.72■□□□□ 0.43
CSHL1-207ENST00000558099 PPP1R1BQ9UD71 204 aaPredicted RBP17.72■□□□□ 0.43
CSHL1-207ENST00000558099 IPO9Q96P70 1041 aaKnown RBP17.71■□□□□ 0.43
CSHL1-207ENST00000558099 SLC4A9Q96Q91 983 aa17.71■□□□□ 0.43
CSHL1-207ENST00000558099 FHDC1Q9C0D6 1143 aaPredicted RBP17.71■□□□□ 0.43
CSHL1-207ENST00000558099 MRS2Q9HD23 443 aa17.71■□□□□ 0.43
CSHL1-207ENST00000558099 LOC102724428A0A0B4J2F2 783 aa17.7■□□□□ 0.42
CSHL1-207ENST00000558099 SIK1P57059 783 aa17.7■□□□□ 0.42
CSHL1-207ENST00000558099 CC2D1BQ5T0F9 858 aaKnown RBP17.7■□□□□ 0.42
CSHL1-207ENST00000558099 ARXQ96QS3 562 aa17.7■□□□□ 0.42
CSHL1-207ENST00000558099 C4BP0C0L5 1744 aa17.7■□□□□ 0.42
CSHL1-207ENST00000558099 UTRNP46939 3433 aa17.7■□□□□ 0.42
CSHL1-207ENST00000558099 ITPK1Q13572 414 aa17.7■□□□□ 0.42
CSHL1-207ENST00000558099 TMOD3Q9NYL9 352 aa17.7■□□□□ 0.42
CSHL1-207ENST00000558099 ZNF831Q5JPB2 1677 aa17.69■□□□□ 0.42
CSHL1-207ENST00000558099 B4GALNT3Q6L9W6 998 aa17.69■□□□□ 0.42
CSHL1-207ENST00000558099 LINC00116Q8NCU8 138 aa17.69■□□□□ 0.42
CSHL1-207ENST00000558099 HSP90AB1P08238 724 aaKnown RBP17.68■□□□□ 0.42
CSHL1-207ENST00000558099 HMGB2P26583 209 aaKnown RBP17.68■□□□□ 0.42
CSHL1-207ENST00000558099 RTL5Q5HYW3 569 aaPredicted RBP17.68■□□□□ 0.42
CSHL1-207ENST00000558099 MYBBP1AQ9BQG0 1328 aaKnown RBP17.68■□□□□ 0.42
CSHL1-207ENST00000558099 ZNF530Q6P9A1 599 aaPredicted RBP17.67■□□□□ 0.42
CSHL1-207ENST00000558099 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
CSHL1-207ENST00000558099 ADAMTS7Q9UKP4 1686 aa17.66■□□□□ 0.42
CSHL1-207ENST00000558099 UBR3Q6ZT12 1888 aa17.66■□□□□ 0.42
CSHL1-207ENST00000558099 DIAPH1O60610 1272 aaKnown RBP17.65■□□□□ 0.42
CSHL1-207ENST00000558099 FLAD1Q8NFF5 587 aa17.65■□□□□ 0.42
CSHL1-207ENST00000558099 ZBTB47Q9UFB7 747 aaPredicted RBP17.65■□□□□ 0.42
CSHL1-207ENST00000558099 SMIM5Q71RC9 77 aa17.64■□□□□ 0.41
CSHL1-207ENST00000558099 MRC1P22897 1456 aa17.63■□□□□ 0.41
CSHL1-207ENST00000558099 CNGB1Q14028 1251 aaPredicted RBP17.63■□□□□ 0.41
CSHL1-207ENST00000558099 AKAP4Q5JQC9 854 aa17.63■□□□□ 0.41
CSHL1-207ENST00000558099 FAM9BQ8IZU0 186 aa17.63■□□□□ 0.41
CSHL1-207ENST00000558099 SSFA2P28290 1259 aa17.62■□□□□ 0.41
CSHL1-207ENST00000558099 CICQ96RK0 1608 aaPredicted RBP17.62■□□□□ 0.41
CSHL1-207ENST00000558099 HMOX1P09601 288 aa17.62■□□□□ 0.41
CSHL1-207ENST00000558099 ATP6V1AP38606 617 aa17.62■□□□□ 0.41
CSHL1-207ENST00000558099 MTHFSDQ2M296 383 aaKnown RBP17.62■□□□□ 0.41
CSHL1-207ENST00000558099 CCDC184Q52MB2 194 aa17.62■□□□□ 0.41
CSHL1-207ENST00000558099 NFATC2IPQ8NCF5 419 aa17.62■□□□□ 0.41
CSHL1-207ENST00000558099 LGR6Q9HBX8 967 aa17.62■□□□□ 0.41
CSHL1-207ENST00000558099 SCN11AQ9UI33 1791 aa17.61■□□□□ 0.41
CSHL1-207ENST00000558099 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.61■□□□□ 0.41
CSHL1-207ENST00000558099 RC3H1Q5TC82 1133 aaKnown RBP17.61■□□□□ 0.41
CSHL1-207ENST00000558099 CCDC136Q96JN2 1154 aa17.61■□□□□ 0.41
CSHL1-207ENST00000558099 COL5A3P25940 1745 aaPredicted RBP17.6■□□□□ 0.41
CSHL1-207ENST00000558099 POLD1P28340 1107 aa17.6■□□□□ 0.41
CSHL1-207ENST00000558099 CABP4P57796 275 aa17.6■□□□□ 0.41
CSHL1-207ENST00000558099 C1orf141Q5JVX7 400 aa17.6■□□□□ 0.41
CSHL1-207ENST00000558099 AK7Q96M32 723 aa17.6■□□□□ 0.41
CSHL1-207ENST00000558099 CNTNAP4Q9C0A0 1308 aa17.59■□□□□ 0.41
CSHL1-207ENST00000558099 GOLGB1Q14789 3259 aaKnown RBP17.59■□□□□ 0.41
CSHL1-207ENST00000558099 RNMTO43148 476 aaKnown RBP17.58■□□□□ 0.41
CSHL1-207ENST00000558099 PPP2R1AP30153 589 aa17.58■□□□□ 0.41
CSHL1-207ENST00000558099 SLC52A2Q9HAB3 445 aa17.58■□□□□ 0.41
CSHL1-207ENST00000558099 NLGN2Q8NFZ4 835 aa17.57■□□□□ 0.4
CSHL1-207ENST00000558099 TCERG1O14776 1098 aaKnown RBP17.57■□□□□ 0.4
CSHL1-207ENST00000558099 MSL1Q68DK7 614 aa17.57■□□□□ 0.4
CSHL1-207ENST00000558099 MYH14Q7Z406 1995 aaKnown RBP17.56■□□□□ 0.4
CSHL1-207ENST00000558099 GNPATO15228 680 aa17.55■□□□□ 0.4
CSHL1-207ENST00000558099 RPS6KA4O75676 772 aa17.55■□□□□ 0.4
CSHL1-207ENST00000558099 TJP1Q07157 1748 aa17.55■□□□□ 0.4
CSHL1-207ENST00000558099 KCPQ6ZWJ8 1503 aa17.54■□□□□ 0.4
CSHL1-207ENST00000558099 MS4A1P11836 297 aa17.54■□□□□ 0.4
CSHL1-207ENST00000558099 IL17REQ8NFR9 667 aa17.54■□□□□ 0.4
CSHL1-207ENST00000558099 RBM42Q9BTD8 480 aaKnown RBP17.54■□□□□ 0.4
CSHL1-207ENST00000558099 RSPH6AQ9H0K4 717 aa17.54■□□□□ 0.4
CSHL1-207ENST00000558099 CD2APQ9Y5K6 639 aa17.54■□□□□ 0.4
CSHL1-207ENST00000558099 PHF14O94880 888 aa17.53■□□□□ 0.4
CSHL1-207ENST00000558099 PNISRQ8TF01 805 aaKnown RBP17.53■□□□□ 0.4
CSHL1-207ENST00000558099 PHACTR3Q96KR7 559 aa17.53■□□□□ 0.4
CSHL1-207ENST00000558099 ADRA2BP18089 450 aa17.53■□□□□ 0.4
CSHL1-207ENST00000558099 YY1P25490 414 aa17.53■□□□□ 0.4
CSHL1-207ENST00000558099 INTS5Q6P9B9 1019 aaKnown RBP17.53■□□□□ 0.4
CSHL1-207ENST00000558099 ARHGEF1Q92888 912 aaKnown RBP17.53■□□□□ 0.4
CSHL1-207ENST00000558099 CEMIPQ8WUJ3 1361 aa17.52■□□□□ 0.4
CSHL1-207ENST00000558099 PTCD1O75127 700 aaKnown RBP17.52■□□□□ 0.39
CSHL1-207ENST00000558099 NBR1Q14596 966 aa17.52■□□□□ 0.39
CSHL1-207ENST00000558099 RTCBQ9Y3I0 505 aaKnown RBP17.52■□□□□ 0.39
CSHL1-207ENST00000558099 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
CSHL1-207ENST00000558099 GYS1P13807 737 aa17.5■□□□□ 0.39
CSHL1-207ENST00000558099 PRKCSHP14314 528 aaPredicted RBP17.5■□□□□ 0.39
CSHL1-207ENST00000558099 CRKLP46109 303 aaKnown RBP17.5■□□□□ 0.39
CSHL1-207ENST00000558099 TRAPPC3LQ5T215 181 aa17.5■□□□□ 0.39
CSHL1-207ENST00000558099 U2SURPO15042 1029 aaKnown RBP17.49■□□□□ 0.39
CSHL1-207ENST00000558099 YBX3P16989 372 aaKnown RBP eCLIP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms