RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 RNMTO43148 476 aaKnown RBP18.22■□□□□ 0.51
ALPK3-202ENST00000558077 AMIGO3Q86WK7 504 aa18.22■□□□□ 0.51
ALPK3-202ENST00000558077 NFATC2IPQ8NCF5 419 aa18.22■□□□□ 0.51
ALPK3-202ENST00000558077 COL24A1Q17RW2 1714 aa18.22■□□□□ 0.51
ALPK3-202ENST00000558077 C4BP0C0L5 1744 aa18.21■□□□□ 0.51
ALPK3-202ENST00000558077 CABP4P57796 275 aa18.21■□□□□ 0.51
ALPK3-202ENST00000558077 ATF5Q9Y2D1 282 aaPredicted RBP18.21■□□□□ 0.51
ALPK3-202ENST00000558077 ZNF831Q5JPB2 1677 aa18.21■□□□□ 0.51
ALPK3-202ENST00000558077 MRC1P22897 1456 aa18.2■□□□□ 0.5
ALPK3-202ENST00000558077 PRKAR2BP31323 418 aa18.2■□□□□ 0.5
ALPK3-202ENST00000558077 RALBP1Q15311 655 aa18.2■□□□□ 0.5
ALPK3-202ENST00000558077 LINC00116Q8NCU8 138 aa18.2■□□□□ 0.5
ALPK3-202ENST00000558077 NUDCQ9Y266 331 aa18.2■□□□□ 0.5
ALPK3-202ENST00000558077 UBR3Q6ZT12 1888 aa18.2■□□□□ 0.5
ALPK3-202ENST00000558077 U2AF1L5P0DN76 240 aaPredicted RBP18.19■□□□□ 0.5
ALPK3-202ENST00000558077 U2AF1Q01081 240 aaKnown RBP eCLIP18.19■□□□□ 0.5
ALPK3-202ENST00000558077 COL23A1Q86Y22 540 aaPredicted RBP18.19■□□□□ 0.5
ALPK3-202ENST00000558077 MTFR1LQ9H019 292 aa18.19■□□□□ 0.5
ALPK3-202ENST00000558077 SLC52A2Q9HAB3 445 aa18.19■□□□□ 0.5
ALPK3-202ENST00000558077 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
ALPK3-202ENST00000558077 FCHSD2O94868 740 aa18.18■□□□□ 0.5
ALPK3-202ENST00000558077 IL17REQ8NFR9 667 aa18.18■□□□□ 0.5
ALPK3-202ENST00000558077 ATP6V1AP38606 617 aa18.17■□□□□ 0.5
ALPK3-202ENST00000558077 IFFO2Q5TF58 517 aa18.17■□□□□ 0.5
ALPK3-202ENST00000558077 GAS2L2Q8NHY3 880 aa18.17■□□□□ 0.5
ALPK3-202ENST00000558077 COL5A3P25940 1745 aaPredicted RBP18.17■□□□□ 0.5
ALPK3-202ENST00000558077 MYH14Q7Z406 1995 aaKnown RBP18.17■□□□□ 0.5
ALPK3-202ENST00000558077 SMIM5Q71RC9 77 aa18.16■□□□□ 0.5
ALPK3-202ENST00000558077 SLC16A10Q8TF71 515 aa18.16■□□□□ 0.5
ALPK3-202ENST00000558077 SIPA1L3O60292 1781 aaPredicted RBP18.16■□□□□ 0.5
ALPK3-202ENST00000558077 MAP3K5Q99683 1374 aa18.16■□□□□ 0.5
ALPK3-202ENST00000558077 CICQ96RK0 1608 aaPredicted RBP18.14■□□□□ 0.49
ALPK3-202ENST00000558077 GNAT3A8MTJ3 354 aa18.14■□□□□ 0.49
ALPK3-202ENST00000558077 PLEKHF1Q96S99 279 aa18.14■□□□□ 0.49
ALPK3-202ENST00000558077 RBM42Q9BTD8 480 aaKnown RBP18.14■□□□□ 0.49
ALPK3-202ENST00000558077 TJP1Q07157 1748 aa18.14■□□□□ 0.49
ALPK3-202ENST00000558077 CEMIPQ8WUJ3 1361 aa18.14■□□□□ 0.49
ALPK3-202ENST00000558077 HMGB2P26583 209 aaKnown RBP18.13■□□□□ 0.49
ALPK3-202ENST00000558077 SLC39A6Q13433 755 aa18.13■□□□□ 0.49
ALPK3-202ENST00000558077 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
ALPK3-202ENST00000558077 PTCD1O75127 700 aaKnown RBP18.12■□□□□ 0.49
ALPK3-202ENST00000558077 PRKRIP1Q9H875 184 aaPredicted RBP18.12■□□□□ 0.49
ALPK3-202ENST00000558077 MYBBP1AQ9BQG0 1328 aaKnown RBP18.12■□□□□ 0.49
ALPK3-202ENST00000558077 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
ALPK3-202ENST00000558077 AK7Q96M32 723 aa18.11■□□□□ 0.49
ALPK3-202ENST00000558077 DLG5Q8TDM6 1919 aa18.11■□□□□ 0.49
ALPK3-202ENST00000558077 RC3H1Q5TC82 1133 aaKnown RBP18.1■□□□□ 0.49
ALPK3-202ENST00000558077 CNTNAP4Q9C0A0 1308 aa18.09■□□□□ 0.49
ALPK3-202ENST00000558077 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.09■□□□□ 0.49
ALPK3-202ENST00000558077 ZNF316A6NFI3 1004 aaPredicted RBP18.09■□□□□ 0.49
ALPK3-202ENST00000558077 DCAF8L1A6NGE4 600 aa18.09■□□□□ 0.49
ALPK3-202ENST00000558077 FLAD1Q8NFF5 587 aa18.09■□□□□ 0.49
ALPK3-202ENST00000558077 GNPATO15228 680 aa18.08■□□□□ 0.48
ALPK3-202ENST00000558077 SSFA2P28290 1259 aa18.08■□□□□ 0.48
ALPK3-202ENST00000558077 PPP1R1BQ9UD71 204 aaPredicted RBP18.08■□□□□ 0.48
ALPK3-202ENST00000558077 DNAJC10Q8IXB1 793 aa18.07■□□□□ 0.48
ALPK3-202ENST00000558077 ARXQ96QS3 562 aa18.07■□□□□ 0.48
ALPK3-202ENST00000558077 MSH5O43196 834 aa18.06■□□□□ 0.48
ALPK3-202ENST00000558077 KCNQ3O43525 872 aa18.06■□□□□ 0.48
ALPK3-202ENST00000558077 HTATSF1O43719 755 aaKnown RBP18.06■□□□□ 0.48
ALPK3-202ENST00000558077 RPS6KA4O75676 772 aa18.06■□□□□ 0.48
ALPK3-202ENST00000558077 PHF14O94880 888 aa18.06■□□□□ 0.48
ALPK3-202ENST00000558077 DCTN1Q14203 1278 aa18.06■□□□□ 0.48
ALPK3-202ENST00000558077 INTS5Q6P9B9 1019 aaKnown RBP18.06■□□□□ 0.48
ALPK3-202ENST00000558077 MCM10Q7L590 875 aa18.06■□□□□ 0.48
ALPK3-202ENST00000558077 FHDC1Q9C0D6 1143 aaPredicted RBP18.06■□□□□ 0.48
ALPK3-202ENST00000558077 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
ALPK3-202ENST00000558077 TEFQ10587 303 aa18.05■□□□□ 0.48
ALPK3-202ENST00000558077 MSL1Q68DK7 614 aa18.05■□□□□ 0.48
ALPK3-202ENST00000558077 SYT17Q9BSW7 474 aa18.05■□□□□ 0.48
ALPK3-202ENST00000558077 CYP19A1P11511 503 aaPredicted RBP18.04■□□□□ 0.48
ALPK3-202ENST00000558077 ZNF790Q6PG37 636 aa18.04■□□□□ 0.48
ALPK3-202ENST00000558077 VSIG10Q8N0Z9 540 aa18.04■□□□□ 0.48
ALPK3-202ENST00000558077 ZNF496Q96IT1 587 aaPredicted RBP18.04■□□□□ 0.48
ALPK3-202ENST00000558077 NFE2L2Q16236 605 aa18.03■□□□□ 0.48
ALPK3-202ENST00000558077 ARHGEF1Q92888 912 aaKnown RBP18.03■□□□□ 0.48
ALPK3-202ENST00000558077 RTCBQ9Y3I0 505 aaKnown RBP18.03■□□□□ 0.48
ALPK3-202ENST00000558077 C4AP0C0L4 1744 aa18.03■□□□□ 0.48
ALPK3-202ENST00000558077 POLD1P28340 1107 aa18.02■□□□□ 0.48
ALPK3-202ENST00000558077 ADRA2BP18089 450 aa18.01■□□□□ 0.47
ALPK3-202ENST00000558077 TRAPPC3LQ5T215 181 aa18.01■□□□□ 0.47
ALPK3-202ENST00000558077 HEG1Q9ULI3 1381 aa18.01■□□□□ 0.47
ALPK3-202ENST00000558077 BTBD11A6QL63 1104 aa18■□□□□ 0.47
ALPK3-202ENST00000558077 CCDC184Q52MB2 194 aa18■□□□□ 0.47
ALPK3-202ENST00000558077 RTF1Q92541 710 aaKnown RBP18■□□□□ 0.47
ALPK3-202ENST00000558077 ADAMTS8Q9UP79 889 aa18■□□□□ 0.47
ALPK3-202ENST00000558077 TTC5Q8N0Z6 440 aa17.99■□□□□ 0.47
ALPK3-202ENST00000558077 THUMPD2Q9BTF0 503 aaKnown RBP17.99■□□□□ 0.47
ALPK3-202ENST00000558077 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
ALPK3-202ENST00000558077 CCDC87Q9NVE4 849 aa17.99■□□□□ 0.47
ALPK3-202ENST00000558077 SOS1Q07889 1333 aaPredicted RBP17.98■□□□□ 0.47
ALPK3-202ENST00000558077 GYS1P13807 737 aa17.98■□□□□ 0.47
ALPK3-202ENST00000558077 ZBTB1Q9Y2K1 713 aa17.98■□□□□ 0.47
ALPK3-202ENST00000558077 TAF7Q15545 349 aaPredicted RBP17.97■□□□□ 0.47
ALPK3-202ENST00000558077 KDM3BQ7LBC6 1761 aa17.96■□□□□ 0.47
ALPK3-202ENST00000558077 SENP3-EIF4A1A0A087X0R7 540 aa17.96■□□□□ 0.47
ALPK3-202ENST00000558077 PRAMEF22A3QJZ6 481 aa17.96■□□□□ 0.47
ALPK3-202ENST00000558077 TMPOP42166 694 aaKnown RBP17.96■□□□□ 0.47
ALPK3-202ENST00000558077 CCDC146Q8IYE0 955 aa17.96■□□□□ 0.47
ALPK3-202ENST00000558077 NLGN2Q8NFZ4 835 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms