RNA–Protein interactions for RNA: ENST00000557834.5

TRIP4-202, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-202ENST00000557834 ANP32CO43423 234 aa29.81■■■□□ 2.36
TRIP4-202ENST00000557834 AKT1S1Q96B36 256 aa29.81■■■□□ 2.36
TRIP4-202ENST00000557834 PLEKHF1Q96S99 279 aa29.81■■■□□ 2.36
TRIP4-202ENST00000557834 SCN11AQ9UI33 1791 aa29.81■■■□□ 2.36
TRIP4-202ENST00000557834 WDR43Q15061 677 aaKnown RBP eCLIP29.8■■■□□ 2.36
TRIP4-202ENST00000557834 ATP6V1AP38606 617 aa29.79■■■□□ 2.36
TRIP4-202ENST00000557834 PTCD1O75127 700 aaKnown RBP29.78■■■□□ 2.36
TRIP4-202ENST00000557834 TFCP2L1Q9NZI6 479 aa29.78■■■□□ 2.36
TRIP4-202ENST00000557834 MAPK8IP3Q9UPT6 1336 aa29.77■■■□□ 2.36
TRIP4-202ENST00000557834 SLC39A6Q13433 755 aa29.77■■■□□ 2.36
TRIP4-202ENST00000557834 CCDC184Q52MB2 194 aa29.77■■■□□ 2.36
TRIP4-202ENST00000557834 PNNQ9H307 717 aaKnown RBP29.77■■■□□ 2.36
TRIP4-202ENST00000557834 TEFQ10587 303 aa29.76■■■□□ 2.35
TRIP4-202ENST00000557834 ITPK1Q13572 414 aa29.76■■■□□ 2.35
TRIP4-202ENST00000557834 DCTN1Q14203 1278 aa29.76■■■□□ 2.35
TRIP4-202ENST00000557834 MCM10Q7L590 875 aa29.76■■■□□ 2.35
TRIP4-202ENST00000557834 CCDC146Q8IYE0 955 aa29.76■■■□□ 2.35
TRIP4-202ENST00000557834 RTF1Q92541 710 aaKnown RBP29.76■■■□□ 2.35
TRIP4-202ENST00000557834 SLC4A9Q96Q91 983 aa29.75■■■□□ 2.35
TRIP4-202ENST00000557834 MRC1P22897 1456 aa29.74■■■□□ 2.35
TRIP4-202ENST00000557834 LINC00116Q8NCU8 138 aa29.74■■■□□ 2.35
TRIP4-202ENST00000557834 ADAMTS7Q9UKP4 1686 aa29.73■■■□□ 2.35
TRIP4-202ENST00000557834 ADAMTS8Q9UP79 889 aa29.73■■■□□ 2.35
TRIP4-202ENST00000557834 ZBTB7AO95365 584 aa29.72■■■□□ 2.35
TRIP4-202ENST00000557834 NFE2L2Q16236 605 aa29.72■■■□□ 2.35
TRIP4-202ENST00000557834 C5P01031 1676 aa29.72■■■□□ 2.35
TRIP4-202ENST00000557834 PNPLA7Q6ZV29 1317 aa29.71■■■□□ 2.35
TRIP4-202ENST00000557834 AK7Q96M32 723 aa29.7■■■□□ 2.35
TRIP4-202ENST00000557834 VIRMAQ69YN4 1812 aaKnown RBP29.7■■■□□ 2.34
TRIP4-202ENST00000557834 CEMIPQ8WUJ3 1361 aa29.69■■■□□ 2.34
TRIP4-202ENST00000557834 MSH5O43196 834 aa29.69■■■□□ 2.34
TRIP4-202ENST00000557834 SMIM5Q71RC9 77 aa29.69■■■□□ 2.34
TRIP4-202ENST00000557834 ATF5Q9Y2D1 282 aaPredicted RBP29.68■■■□□ 2.34
TRIP4-202ENST00000557834 RRP7AQ9Y3A4 280 aaKnown RBP29.67■■■□□ 2.34
TRIP4-202ENST00000557834 CASZ1Q86V15 1759 aa29.67■■■□□ 2.34
TRIP4-202ENST00000557834 C4BP0C0L5 1744 aa29.66■■■□□ 2.34
TRIP4-202ENST00000557834 HTATSF1O43719 755 aaKnown RBP29.66■■■□□ 2.34
TRIP4-202ENST00000557834 TAF1LQ8IZX4 1826 aa29.66■■■□□ 2.34
TRIP4-202ENST00000557834 BTBD11A6QL63 1104 aa29.65■■■□□ 2.34
TRIP4-202ENST00000557834 PHF14O94880 888 aa29.65■■■□□ 2.34
TRIP4-202ENST00000557834 HMGB2P26583 209 aaKnown RBP29.65■■■□□ 2.34
TRIP4-202ENST00000557834 TTC5Q8N0Z6 440 aa29.65■■■□□ 2.34
TRIP4-202ENST00000557834 RUNDC1Q96C34 613 aa29.65■■■□□ 2.34
TRIP4-202ENST00000557834 THUMPD2Q9BTF0 503 aaKnown RBP29.65■■■□□ 2.34
TRIP4-202ENST00000557834 SPON1Q9HCB6 807 aa29.65■■■□□ 2.34
TRIP4-202ENST00000557834 RIPK4P57078 832 aa29.64■■■□□ 2.34
TRIP4-202ENST00000557834 NEUROD2Q15784 382 aa29.64■■■□□ 2.34
TRIP4-202ENST00000557834 AMIGO3Q86WK7 504 aa29.64■■■□□ 2.34
TRIP4-202ENST00000557834 COL23A1Q86Y22 540 aaPredicted RBP29.64■■■□□ 2.34
TRIP4-202ENST00000557834 MRS2Q9HD23 443 aa29.64■■■□□ 2.34
TRIP4-202ENST00000557834 GNPATO15228 680 aa29.63■■■□□ 2.33
TRIP4-202ENST00000557834 KCNQ3O43525 872 aa29.62■■■□□ 2.33
TRIP4-202ENST00000557834 TMPOP42166 694 aaKnown RBP29.62■■■□□ 2.33
TRIP4-202ENST00000557834 DNAJC10Q8IXB1 793 aa29.62■■■□□ 2.33
TRIP4-202ENST00000557834 TUBGCP6Q96RT7 1819 aa29.61■■■□□ 2.33
TRIP4-202ENST00000557834 ZNF790Q6PG37 636 aa29.61■■■□□ 2.33
TRIP4-202ENST00000557834 KCPQ6ZWJ8 1503 aa29.61■■■□□ 2.33
TRIP4-202ENST00000557834 MIS18AQ9NYP9 233 aa29.6■■■□□ 2.33
TRIP4-202ENST00000557834 ZNF496Q96IT1 587 aaPredicted RBP29.59■■■□□ 2.33
TRIP4-202ENST00000557834 MTFR1LQ9H019 292 aa29.59■■■□□ 2.33
TRIP4-202ENST00000557834 LRP5O75197 1615 aa29.59■■■□□ 2.33
TRIP4-202ENST00000557834 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.58■■■□□ 2.33
TRIP4-202ENST00000557834 SIPA1L3O60292 1781 aaPredicted RBP29.58■■■□□ 2.33
TRIP4-202ENST00000557834 DLG5Q8TDM6 1919 aa29.58■■■□□ 2.33
TRIP4-202ENST00000557834 TAF7Q15545 349 aaPredicted RBP29.57■■■□□ 2.32
TRIP4-202ENST00000557834 CRKLP46109 303 aaKnown RBP29.56■■■□□ 2.32
TRIP4-202ENST00000557834 TJP1Q07157 1748 aa29.56■■■□□ 2.32
TRIP4-202ENST00000557834 CNTNAP4Q9C0A0 1308 aa29.55■■■□□ 2.32
TRIP4-202ENST00000557834 QSER1Q2KHR3 1735 aa29.55■■■□□ 2.32
TRIP4-202ENST00000557834 FLAD1Q8NFF5 587 aa29.55■■■□□ 2.32
TRIP4-202ENST00000557834 PPP1R1BQ9UD71 204 aaPredicted RBP29.55■■■□□ 2.32
TRIP4-202ENST00000557834 ZNF831Q5JPB2 1677 aa29.55■■■□□ 2.32
TRIP4-202ENST00000557834 SENP3-EIF4A1A0A087X0R7 540 aa29.54■■■□□ 2.32
TRIP4-202ENST00000557834 RC3H1Q5TC82 1133 aaKnown RBP29.54■■■□□ 2.32
TRIP4-202ENST00000557834 MSL1Q68DK7 614 aa29.54■■■□□ 2.32
TRIP4-202ENST00000557834 PNISRQ8TF01 805 aaKnown RBP29.54■■■□□ 2.32
TRIP4-202ENST00000557834 SLC16A10Q8TF71 515 aa29.54■■■□□ 2.32
TRIP4-202ENST00000557834 FMNL2Q96PY5 1086 aa29.54■■■□□ 2.32
TRIP4-202ENST00000557834 RTCBQ9Y3I0 505 aaKnown RBP29.54■■■□□ 2.32
TRIP4-202ENST00000557834 SSFA2P28290 1259 aa29.53■■■□□ 2.32
TRIP4-202ENST00000557834 PTGER2P43116 358 aa29.53■■■□□ 2.32
TRIP4-202ENST00000557834 COL5A3P25940 1745 aaPredicted RBP29.53■■■□□ 2.32
TRIP4-202ENST00000557834 APAF1O14727 1248 aa29.52■■■□□ 2.32
TRIP4-202ENST00000557834 CYP19A1P11511 503 aaPredicted RBP29.52■■■□□ 2.32
TRIP4-202ENST00000557834 VSIG10Q8N0Z9 540 aa29.52■■■□□ 2.32
TRIP4-202ENST00000557834 HEG1Q9ULI3 1381 aa29.52■■■□□ 2.32
TRIP4-202ENST00000557834 RPS6KA4O75676 772 aa29.51■■■□□ 2.31
TRIP4-202ENST00000557834 LMOD3Q0VAK6 560 aa29.51■■■□□ 2.31
TRIP4-202ENST00000557834 INTS5Q6P9B9 1019 aaKnown RBP29.51■■■□□ 2.31
TRIP4-202ENST00000557834 UBR2Q8IWV8 1755 aa29.51■■■□□ 2.31
TRIP4-202ENST00000557834 UBR3Q6ZT12 1888 aa29.51■■■□□ 2.31
TRIP4-202ENST00000557834 TRAPPC3LQ5T215 181 aa29.5■■■□□ 2.31
TRIP4-202ENST00000557834 CCDC87Q9NVE4 849 aa29.5■■■□□ 2.31
TRIP4-202ENST00000557834 TRIM35Q9UPQ4 493 aa29.49■■■□□ 2.31
TRIP4-202ENST00000557834 PRAMEF22A3QJZ6 481 aa29.47■■■□□ 2.31
TRIP4-202ENST00000557834 ARHGEF1Q92888 912 aaKnown RBP29.47■■■□□ 2.31
TRIP4-202ENST00000557834 SGIP1Q9BQI5 828 aa29.47■■■□□ 2.31
TRIP4-202ENST00000557834 CANXP27824 592 aaKnown RBP29.46■■■□□ 2.31
TRIP4-202ENST00000557834 ZBTB1Q9Y2K1 713 aa29.46■■■□□ 2.31
TRIP4-202ENST00000557834 CICQ96RK0 1608 aaPredicted RBP29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms