RNA–Protein interactions for RNA: ENST00000557814.5

PKNOX2-208, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 559 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-208ENST00000557814 GNAT3A8MTJ3 354 aa8.97□□□□□ -0.97
PKNOX2-208ENST00000557814 LMOD3Q0VAK6 560 aa8.97□□□□□ -0.97
PKNOX2-208ENST00000557814 ZNF530Q6P9A1 599 aaPredicted RBP8.97□□□□□ -0.97
PKNOX2-208ENST00000557814 MARCH10Q8NA82 808 aaPredicted RBP8.97□□□□□ -0.97
PKNOX2-208ENST00000557814 SGIP1Q9BQI5 828 aa8.97□□□□□ -0.97
PKNOX2-208ENST00000557814 BABAM1Q9NWV8 329 aa8.97□□□□□ -0.97
PKNOX2-208ENST00000557814 USP35Q9P2H5 1018 aa8.97□□□□□ -0.97
PKNOX2-208ENST00000557814 IL16Q14005 1332 aa8.97□□□□□ -0.97
PKNOX2-208ENST00000557814 ERVV-2B6SEH9 535 aa8.96□□□□□ -0.98
PKNOX2-208ENST00000557814 NEFMP07197 916 aa8.96□□□□□ -0.98
PKNOX2-208ENST00000557814 FAM196AQ6ZSG2 479 aa8.96□□□□□ -0.98
PKNOX2-208ENST00000557814 WWC1Q8IX03 1113 aa8.96□□□□□ -0.98
PKNOX2-208ENST00000557814 CCDC146Q8IYE0 955 aa8.96□□□□□ -0.98
PKNOX2-208ENST00000557814 DNAJC5GQ8N7S2 189 aa8.96□□□□□ -0.98
PKNOX2-208ENST00000557814 IL17REQ8NFR9 667 aa8.96□□□□□ -0.98
PKNOX2-208ENST00000557814 ZNF853P0CG23 659 aa8.95□□□□□ -0.98
PKNOX2-208ENST00000557814 RIPK4P57078 832 aa8.95□□□□□ -0.98
PKNOX2-208ENST00000557814 WDR63Q8IWG1 891 aa8.95□□□□□ -0.98
PKNOX2-208ENST00000557814 PCDH10Q9P2E7 1040 aa8.95□□□□□ -0.98
PKNOX2-208ENST00000557814 ZBED9Q6R2W3 1325 aa8.95□□□□□ -0.98
PKNOX2-208ENST00000557814 RNMTO43148 476 aaKnown RBP8.94□□□□□ -0.98
PKNOX2-208ENST00000557814 C1orf141Q5JVX7 400 aa8.94□□□□□ -0.98
PKNOX2-208ENST00000557814 TRMT2AQ8IZ69 625 aaKnown RBP8.94□□□□□ -0.98
PKNOX2-208ENST00000557814 CHL1O00533 1208 aa8.93□□□□□ -0.98
PKNOX2-208ENST00000557814 CALD1Q05682 793 aaKnown RBP8.93□□□□□ -0.98
PKNOX2-208ENST00000557814 PDE3BQ13370 1112 aa8.93□□□□□ -0.98
PKNOX2-208ENST00000557814 TNS4Q8IZW8 715 aa8.93□□□□□ -0.98
PKNOX2-208ENST00000557814 LGR6Q9HBX8 967 aa8.93□□□□□ -0.98
PKNOX2-208ENST00000557814 HEG1Q9ULI3 1381 aa8.93□□□□□ -0.98
PKNOX2-208ENST00000557814 SCN11AQ9UI33 1791 aa8.92□□□□□ -0.98
PKNOX2-208ENST00000557814 TOGARAM1Q9Y4F4 1720 aa8.92□□□□□ -0.98
PKNOX2-208ENST00000557814 DDX54Q8TDD1 881 aaKnown RBP8.92□□□□□ -0.98
PKNOX2-208ENST00000557814 CFAP44Q96MT7 982 aa8.92□□□□□ -0.98
PKNOX2-208ENST00000557814 SLC52A2Q9HAB3 445 aa8.92□□□□□ -0.98
PKNOX2-208ENST00000557814 IFT57Q9NWB7 429 aa8.92□□□□□ -0.98
PKNOX2-208ENST00000557814 SIPA1L3O60292 1781 aaPredicted RBP8.91□□□□□ -0.98
PKNOX2-208ENST00000557814 GPR162Q16538 588 aa8.91□□□□□ -0.98
PKNOX2-208ENST00000557814 MPRIPQ6WCQ1 1025 aa8.91□□□□□ -0.98
PKNOX2-208ENST00000557814 PROM2Q8N271 834 aa8.91□□□□□ -0.98
PKNOX2-208ENST00000557814 RTF1Q92541 710 aaKnown RBP8.91□□□□□ -0.98
PKNOX2-208ENST00000557814 RRP7AQ9Y3A4 280 aaKnown RBP8.91□□□□□ -0.98
PKNOX2-208ENST00000557814 NHSQ6T4R5 1651 aa8.91□□□□□ -0.98
PKNOX2-208ENST00000557814 PAPPAQ13219 1627 aa8.91□□□□□ -0.98
PKNOX2-208ENST00000557814 ATP10DQ9P241 1426 aa8.9□□□□□ -0.98
PKNOX2-208ENST00000557814 DLG5Q8TDM6 1919 aa8.9□□□□□ -0.98
PKNOX2-208ENST00000557814 SOS1Q07889 1333 aaPredicted RBP8.9□□□□□ -0.98
PKNOX2-208ENST00000557814 HNRNPUQ00839 825 aaKnown RBP eCLIP8.9□□□□□ -0.98
PKNOX2-208ENST00000557814 SLFN5Q08AF3 891 aa8.9□□□□□ -0.98
PKNOX2-208ENST00000557814 TAF7Q15545 349 aaPredicted RBP8.9□□□□□ -0.98
PKNOX2-208ENST00000557814 MCM10Q7L590 875 aa8.9□□□□□ -0.98
PKNOX2-208ENST00000557814 PTF1AQ7RTS3 328 aa8.9□□□□□ -0.98
PKNOX2-208ENST00000557814 BCL11BQ9C0K0 894 aaPredicted RBP8.9□□□□□ -0.98
PKNOX2-208ENST00000557814 CICQ96RK0 1608 aaPredicted RBP8.9□□□□□ -0.99
PKNOX2-208ENST00000557814 E9PSI1 815 aa8.89□□□□□ -0.99
PKNOX2-208ENST00000557814 GNAI1P63096 354 aa8.89□□□□□ -0.99
PKNOX2-208ENST00000557814 GOLGA2Q08379 1002 aa8.89□□□□□ -0.99
PKNOX2-208ENST00000557814 DCTN1Q14203 1278 aa8.89□□□□□ -0.99
PKNOX2-208ENST00000557814 PIGBQ92521 554 aa8.89□□□□□ -0.99
PKNOX2-208ENST00000557814 THUMPD2Q9BTF0 503 aaKnown RBP8.89□□□□□ -0.99
PKNOX2-208ENST00000557814 ZNF831Q5JPB2 1677 aa8.88□□□□□ -0.99
PKNOX2-208ENST00000557814 PRIM1P49642 420 aaKnown RBP8.88□□□□□ -0.99
PKNOX2-208ENST00000557814 CABP4P57796 275 aa8.88□□□□□ -0.99
PKNOX2-208ENST00000557814 NFATC2IPQ8NCF5 419 aa8.88□□□□□ -0.99
PKNOX2-208ENST00000557814 SPINK5Q9NQ38 1064 aaPredicted RBP8.88□□□□□ -0.99
PKNOX2-208ENST00000557814 KCPQ6ZWJ8 1503 aa8.88□□□□□ -0.99
PKNOX2-208ENST00000557814 DOT1LQ8TEK3 1739 aa8.88□□□□□ -0.99
PKNOX2-208ENST00000557814 KDM3BQ7LBC6 1761 aa8.87□□□□□ -0.99
PKNOX2-208ENST00000557814 UBR2Q8IWV8 1755 aa8.87□□□□□ -0.99
PKNOX2-208ENST00000557814 PLSCR1O15162 318 aa8.87□□□□□ -0.99
PKNOX2-208ENST00000557814 HOXB7P09629 217 aa8.87□□□□□ -0.99
PKNOX2-208ENST00000557814 TEFQ10587 303 aa8.87□□□□□ -0.99
PKNOX2-208ENST00000557814 NEUROD2Q15784 382 aa8.87□□□□□ -0.99
PKNOX2-208ENST00000557814 DUSP27Q5VZP5 1158 aa8.87□□□□□ -0.99
PKNOX2-208ENST00000557814 ZNF790Q6PG37 636 aa8.87□□□□□ -0.99
PKNOX2-208ENST00000557814 VSIG10Q8N0Z9 540 aa8.87□□□□□ -0.99
PKNOX2-208ENST00000557814 ARXQ96QS3 562 aa8.87□□□□□ -0.99
PKNOX2-208ENST00000557814 ATG3Q9NT62 314 aa8.87□□□□□ -0.99
PKNOX2-208ENST00000557814 TMOD3Q9NYL9 352 aa8.87□□□□□ -0.99
PKNOX2-208ENST00000557814 SBF2Q86WG5 1849 aa8.87□□□□□ -0.99
PKNOX2-208ENST00000557814 RGPD3A6NKT7 1758 aaPredicted RBP8.86□□□□□ -0.99
PKNOX2-208ENST00000557814 RGPD4Q7Z3J3 1758 aa8.86□□□□□ -0.99
PKNOX2-208ENST00000557814 FANCIQ9NVI1 1328 aa8.86□□□□□ -0.99
PKNOX2-208ENST00000557814 CT47B1P0C2W7 299 aaPredicted RBP8.86□□□□□ -0.99
PKNOX2-208ENST00000557814 YBX3P16989 372 aaKnown RBP eCLIP8.86□□□□□ -0.99
PKNOX2-208ENST00000557814 EIF4A1P60842 406 aaKnown RBP8.86□□□□□ -0.99
PKNOX2-208ENST00000557814 SMARCC1Q92922 1105 aaPredicted RBP8.86□□□□□ -0.99
PKNOX2-208ENST00000557814 MTFR1LQ9H019 292 aa8.86□□□□□ -0.99
PKNOX2-208ENST00000557814 MYH16Q9H6N6 1097 aa8.86□□□□□ -0.99
PKNOX2-208ENST00000557814 MBIPQ9NS73 344 aa8.86□□□□□ -0.99
PKNOX2-208ENST00000557814 ITGB4P16144 1822 aa8.85□□□□□ -0.99
PKNOX2-208ENST00000557814 BTBD11A6QL63 1104 aa8.85□□□□□ -0.99
PKNOX2-208ENST00000557814 PELP1Q8IZL8 1130 aaKnown RBP8.85□□□□□ -0.99
PKNOX2-208ENST00000557814 ZNF526Q8TF50 670 aaPredicted RBP8.85□□□□□ -0.99
PKNOX2-208ENST00000557814 ZNF428Q96B54 188 aa8.85□□□□□ -0.99
PKNOX2-208ENST00000557814 GPBP1L1Q9HC44 474 aaPredicted RBP8.85□□□□□ -0.99
PKNOX2-208ENST00000557814 ASAP1Q9ULH1 1129 aa8.85□□□□□ -0.99
PKNOX2-208ENST00000557814 KIF3CO14782 793 aa8.84□□□□□ -0.99
PKNOX2-208ENST00000557814 HMGB2P26583 209 aaKnown RBP8.84□□□□□ -0.99
PKNOX2-208ENST00000557814 HTRA3P83110 453 aa8.84□□□□□ -0.99
PKNOX2-208ENST00000557814 NLGN2Q8NFZ4 835 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms