RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 TEX13AQ9BXU3 409 aaPredicted RBP13.51□□□□□ -0.25
GABRB3-213ENST00000557765 CCDC9Q9Y3X0 531 aaKnown RBP13.51□□□□□ -0.25
GABRB3-213ENST00000557765 KDM6AO15550 1401 aaPredicted RBP13.5□□□□□ -0.25
GABRB3-213ENST00000557765 HEG1Q9ULI3 1381 aa13.5□□□□□ -0.25
GABRB3-213ENST00000557765 ERBB4Q15303 1308 aa13.5□□□□□ -0.25
GABRB3-213ENST00000557765 CABP4P57796 275 aa13.5□□□□□ -0.25
GABRB3-213ENST00000557765 PDE3AQ14432 1141 aa13.5□□□□□ -0.25
GABRB3-213ENST00000557765 TWISTNBQ3B726 338 aaPredicted RBP13.5□□□□□ -0.25
GABRB3-213ENST00000557765 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
GABRB3-213ENST00000557765 KDM3BQ7LBC6 1761 aa13.5□□□□□ -0.25
GABRB3-213ENST00000557765 RARSP54136 660 aaKnown RBP13.49□□□□□ -0.25
GABRB3-213ENST00000557765 MPRIPQ6WCQ1 1025 aa13.49□□□□□ -0.25
GABRB3-213ENST00000557765 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
GABRB3-213ENST00000557765 SPINK5Q9NQ38 1064 aaPredicted RBP13.49□□□□□ -0.25
GABRB3-213ENST00000557765 SHANK3Q9BYB0 1731 aa13.49□□□□□ -0.25
GABRB3-213ENST00000557765 RBM6P78332 1123 aaKnown RBP13.48□□□□□ -0.25
GABRB3-213ENST00000557765 EXOSC9Q06265 439 aaKnown RBP13.48□□□□□ -0.25
GABRB3-213ENST00000557765 CCDC30Q5VVM6 783 aa13.48□□□□□ -0.25
GABRB3-213ENST00000557765 ZNF790Q6PG37 636 aa13.48□□□□□ -0.25
GABRB3-213ENST00000557765 CACNA1FO60840 1977 aa13.48□□□□□ -0.25
GABRB3-213ENST00000557765 PTPRCP08575 1304 aa13.47□□□□□ -0.25
GABRB3-213ENST00000557765 VAMP4O75379 141 aa13.47□□□□□ -0.25
GABRB3-213ENST00000557765 SMARCC1Q92922 1105 aaPredicted RBP13.47□□□□□ -0.25
GABRB3-213ENST00000557765 FMNL2Q96PY5 1086 aa13.47□□□□□ -0.25
GABRB3-213ENST00000557765 STK31Q9BXU1 1019 aa13.47□□□□□ -0.25
GABRB3-213ENST00000557765 TMOD3Q9NYL9 352 aa13.47□□□□□ -0.25
GABRB3-213ENST00000557765 USP35Q9P2H5 1018 aa13.47□□□□□ -0.25
GABRB3-213ENST00000557765 LAS1LQ9Y4W2 734 aaKnown RBP13.47□□□□□ -0.25
GABRB3-213ENST00000557765 IBTKQ9P2D0 1353 aaPredicted RBP13.46□□□□□ -0.25
GABRB3-213ENST00000557765 VIRMAQ69YN4 1812 aaKnown RBP13.46□□□□□ -0.25
GABRB3-213ENST00000557765 RRP1P56182 461 aaKnown RBP13.46□□□□□ -0.25
GABRB3-213ENST00000557765 EIF4A1P60842 406 aaKnown RBP13.46□□□□□ -0.25
GABRB3-213ENST00000557765 DCTN1Q14203 1278 aa13.46□□□□□ -0.25
GABRB3-213ENST00000557765 QTRT2Q9H974 415 aaKnown RBP13.46□□□□□ -0.25
GABRB3-213ENST00000557765 LGR6Q9HBX8 967 aa13.46□□□□□ -0.25
GABRB3-213ENST00000557765 ZNF831Q5JPB2 1677 aa13.45□□□□□ -0.26
GABRB3-213ENST00000557765 SNRPA1P09661 255 aaKnown RBP13.45□□□□□ -0.26
GABRB3-213ENST00000557765 NFATC2IPQ8NCF5 419 aa13.45□□□□□ -0.26
GABRB3-213ENST00000557765 DDX54Q8TDD1 881 aaKnown RBP13.45□□□□□ -0.26
GABRB3-213ENST00000557765 TSR2Q969E8 191 aaKnown RBP13.45□□□□□ -0.26
GABRB3-213ENST00000557765 THUMPD2Q9BTF0 503 aaKnown RBP13.45□□□□□ -0.26
GABRB3-213ENST00000557765 GLI3P10071 1580 aa13.45□□□□□ -0.26
GABRB3-213ENST00000557765 PAPPAQ13219 1627 aa13.44□□□□□ -0.26
GABRB3-213ENST00000557765 CICQ96RK0 1608 aaPredicted RBP13.44□□□□□ -0.26
GABRB3-213ENST00000557765 API5Q9BZZ5 524 aaKnown RBP13.44□□□□□ -0.26
GABRB3-213ENST00000557765 DBF4Q9UBU7 674 aaPredicted RBP13.44□□□□□ -0.26
GABRB3-213ENST00000557765 SUPT16HQ9Y5B9 1047 aaKnown RBP13.44□□□□□ -0.26
GABRB3-213ENST00000557765 FAM98CQ17RN3 349 aaKnown RBP13.43□□□□□ -0.26
GABRB3-213ENST00000557765 ZKSCAN2Q63HK3 967 aa13.43□□□□□ -0.26
GABRB3-213ENST00000557765 SMC4Q9NTJ3 1288 aa13.43□□□□□ -0.26
GABRB3-213ENST00000557765 UBR2Q8IWV8 1755 aa13.43□□□□□ -0.26
GABRB3-213ENST00000557765 GIGYF1O75420 1035 aaPredicted RBP13.42□□□□□ -0.26
GABRB3-213ENST00000557765 FAM196AQ6ZSG2 479 aa13.42□□□□□ -0.26
GABRB3-213ENST00000557765 CANXP27824 592 aaKnown RBP13.41□□□□□ -0.26
GABRB3-213ENST00000557765 C8orf58Q8NAV2 365 aa13.41□□□□□ -0.26
GABRB3-213ENST00000557765 HYPKQ9NX55 129 aa13.41□□□□□ -0.26
GABRB3-213ENST00000557765 HDAC5Q9UQL6 1122 aa13.41□□□□□ -0.26
GABRB3-213ENST00000557765 RGL2O15211 777 aa13.4□□□□□ -0.26
GABRB3-213ENST00000557765 ATF7IPQ6VMQ6 1270 aa13.4□□□□□ -0.26
GABRB3-213ENST00000557765 SSH1Q8WYL5 1049 aa13.4□□□□□ -0.26
GABRB3-213ENST00000557765 STARD3NLO95772 234 aa13.39□□□□□ -0.27
GABRB3-213ENST00000557765 RXRBP28702 533 aa13.39□□□□□ -0.27
GABRB3-213ENST00000557765 HDGFL1Q5TGJ6 251 aa13.39□□□□□ -0.27
GABRB3-213ENST00000557765 SEPT12Q8IYM1 358 aa13.39□□□□□ -0.27
GABRB3-213ENST00000557765 MARCH10Q8NA82 808 aaPredicted RBP13.39□□□□□ -0.27
GABRB3-213ENST00000557765 PXDNLA1KZ92 1463 aa13.39□□□□□ -0.27
GABRB3-213ENST00000557765 LAMB4A4D0S4 1761 aa13.38□□□□□ -0.27
GABRB3-213ENST00000557765 DDX58O95786 925 aaKnown RBP13.38□□□□□ -0.27
GABRB3-213ENST00000557765 MRPL50Q8N5N7 158 aaKnown RBP13.38□□□□□ -0.27
GABRB3-213ENST00000557765 DDX21Q9NR30 783 aaKnown RBP eCLIP13.38□□□□□ -0.27
GABRB3-213ENST00000557765 RGS12O14924 1447 aa13.38□□□□□ -0.27
GABRB3-213ENST00000557765 NHSQ6T4R5 1651 aa13.37□□□□□ -0.27
GABRB3-213ENST00000557765 TOGARAM1Q9Y4F4 1720 aa13.37□□□□□ -0.27
GABRB3-213ENST00000557765 FTSJ3Q8IY81 847 aaKnown RBP13.37□□□□□ -0.27
GABRB3-213ENST00000557765 DZIP1LQ8IYY4 767 aaKnown RBP13.37□□□□□ -0.27
GABRB3-213ENST00000557765 PIGBQ92521 554 aa13.37□□□□□ -0.27
GABRB3-213ENST00000557765 DDX19BQ9UMR2 479 aa13.37□□□□□ -0.27
GABRB3-213ENST00000557765 ITGB4P16144 1822 aa13.36□□□□□ -0.27
GABRB3-213ENST00000557765 DOT1LQ8TEK3 1739 aa13.36□□□□□ -0.27
GABRB3-213ENST00000557765 KCPQ6ZWJ8 1503 aa13.36□□□□□ -0.27
GABRB3-213ENST00000557765 A0A0G2JS52 829 aa13.36□□□□□ -0.27
GABRB3-213ENST00000557765 MYT1Q01538 1121 aa13.36□□□□□ -0.27
GABRB3-213ENST00000557765 KRT27Q7Z3Y8 459 aa13.36□□□□□ -0.27
GABRB3-213ENST00000557765 TSPYL6Q8N831 410 aa13.36□□□□□ -0.27
GABRB3-213ENST00000557765 ZNF496Q96IT1 587 aaPredicted RBP13.36□□□□□ -0.27
GABRB3-213ENST00000557765 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
GABRB3-213ENST00000557765 SLC4A2P04920 1241 aa13.35□□□□□ -0.27
GABRB3-213ENST00000557765 CCT4P50991 539 aaKnown RBP13.35□□□□□ -0.27
GABRB3-213ENST00000557765 SENP3-EIF4A1A0A087X0R7 540 aa13.34□□□□□ -0.27
GABRB3-213ENST00000557765 BCAR3O75815 825 aa13.34□□□□□ -0.27
GABRB3-213ENST00000557765 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
GABRB3-213ENST00000557765 ATG3Q9NT62 314 aa13.34□□□□□ -0.27
GABRB3-213ENST00000557765 MIS18AQ9NYP9 233 aa13.34□□□□□ -0.27
GABRB3-213ENST00000557765 ABCC4O15439 1325 aa13.34□□□□□ -0.27
GABRB3-213ENST00000557765 FLIIQ13045 1269 aa13.33□□□□□ -0.28
GABRB3-213ENST00000557765 INTS3Q68E01 1043 aaKnown RBP13.33□□□□□ -0.28
GABRB3-213ENST00000557765 NPM2Q86SE8 214 aaKnown RBP13.33□□□□□ -0.28
GABRB3-213ENST00000557765 NOB1Q9ULX3 412 aaKnown RBP13.33□□□□□ -0.28
GABRB3-213ENST00000557765 ATP10DQ9P241 1426 aa13.32□□□□□ -0.28
GABRB3-213ENST00000557765 TRIM27P14373 513 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms