RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 ACSBG1Q96GR2 724 aa18.5■□□□□ 0.55
SUPT16H-208ENST00000557652 BAG6P46379 1132 aa18.49■□□□□ 0.55
SUPT16H-208ENST00000557652 UPF1Q92900 1129 aaKnown RBP eCLIP18.49■□□□□ 0.55
SUPT16H-208ENST00000557652 SYTL4Q96C24 671 aaPredicted RBP18.49■□□□□ 0.55
SUPT16H-208ENST00000557652 LGR6Q9HBX8 967 aa18.49■□□□□ 0.55
SUPT16H-208ENST00000557652 UBR2Q8IWV8 1755 aa18.49■□□□□ 0.55
SUPT16H-208ENST00000557652 TAF7Q15545 349 aaPredicted RBP18.48■□□□□ 0.55
SUPT16H-208ENST00000557652 NFATC2IPQ8NCF5 419 aa18.48■□□□□ 0.55
SUPT16H-208ENST00000557652 PIGBQ92521 554 aa18.48■□□□□ 0.55
SUPT16H-208ENST00000557652 TRIM35Q9UPQ4 493 aa18.48■□□□□ 0.55
SUPT16H-208ENST00000557652 CICQ96RK0 1608 aaPredicted RBP18.48■□□□□ 0.55
SUPT16H-208ENST00000557652 KDM3BQ7LBC6 1761 aa18.47■□□□□ 0.55
SUPT16H-208ENST00000557652 KCNQ2O43526 872 aa18.47■□□□□ 0.55
SUPT16H-208ENST00000557652 IL16Q14005 1332 aa18.47■□□□□ 0.55
SUPT16H-208ENST00000557652 NEUROD2Q15784 382 aa18.46■□□□□ 0.55
SUPT16H-208ENST00000557652 MCM10Q7L590 875 aa18.46■□□□□ 0.55
SUPT16H-208ENST00000557652 RRP7AQ9Y3A4 280 aaKnown RBP18.46■□□□□ 0.55
SUPT16H-208ENST00000557652 APBA3O96018 575 aa18.45■□□□□ 0.54
SUPT16H-208ENST00000557652 WDR63Q8IWG1 891 aa18.45■□□□□ 0.54
SUPT16H-208ENST00000557652 RREB1Q92766 1687 aa18.44■□□□□ 0.54
SUPT16H-208ENST00000557652 SLC27A3Q5K4L6 730 aa18.44■□□□□ 0.54
SUPT16H-208ENST00000557652 WWC1Q8IX03 1113 aa18.44■□□□□ 0.54
SUPT16H-208ENST00000557652 PALLDQ8WX93 1383 aa18.43■□□□□ 0.54
SUPT16H-208ENST00000557652 BTBD11A6QL63 1104 aa18.43■□□□□ 0.54
SUPT16H-208ENST00000557652 SOCS7O14512 581 aa18.43■□□□□ 0.54
SUPT16H-208ENST00000557652 TTC5Q8N0Z6 440 aa18.43■□□□□ 0.54
SUPT16H-208ENST00000557652 TAF1LQ8IZX4 1826 aa18.43■□□□□ 0.54
SUPT16H-208ENST00000557652 GNAI1P63096 354 aa18.42■□□□□ 0.54
SUPT16H-208ENST00000557652 DCTN1Q14203 1278 aa18.42■□□□□ 0.54
SUPT16H-208ENST00000557652 ZNF790Q6PG37 636 aa18.42■□□□□ 0.54
SUPT16H-208ENST00000557652 VSIG10Q8N0Z9 540 aa18.42■□□□□ 0.54
SUPT16H-208ENST00000557652 CFAP44Q96MT7 982 aa18.42■□□□□ 0.54
SUPT16H-208ENST00000557652 IFT57Q9NWB7 429 aa18.42■□□□□ 0.54
SUPT16H-208ENST00000557652 ATG3Q9NT62 314 aa18.41■□□□□ 0.54
SUPT16H-208ENST00000557652 CHL1O00533 1208 aa18.4■□□□□ 0.54
SUPT16H-208ENST00000557652 CAMKK2Q96RR4 588 aa18.4■□□□□ 0.54
SUPT16H-208ENST00000557652 ZNF521Q96K83 1311 aa18.4■□□□□ 0.54
SUPT16H-208ENST00000557652 PTF1AQ7RTS3 328 aa18.39■□□□□ 0.53
SUPT16H-208ENST00000557652 TEX13AQ9BXU3 409 aaPredicted RBP18.39■□□□□ 0.53
SUPT16H-208ENST00000557652 ASAP1Q9ULH1 1129 aa18.39■□□□□ 0.53
SUPT16H-208ENST00000557652 KCPQ6ZWJ8 1503 aa18.39■□□□□ 0.53
SUPT16H-208ENST00000557652 C5P01031 1676 aa18.38■□□□□ 0.53
SUPT16H-208ENST00000557652 LOC102724428A0A0B4J2F2 783 aa18.38■□□□□ 0.53
SUPT16H-208ENST00000557652 ZNF853P0CG23 659 aa18.38■□□□□ 0.53
SUPT16H-208ENST00000557652 SIK1P57059 783 aa18.38■□□□□ 0.53
SUPT16H-208ENST00000557652 FMNL2Q96PY5 1086 aa18.38■□□□□ 0.53
SUPT16H-208ENST00000557652 CHMP4AQ9BY43 222 aa18.38■□□□□ 0.53
SUPT16H-208ENST00000557652 SOS1Q07889 1333 aaPredicted RBP18.38■□□□□ 0.53
SUPT16H-208ENST00000557652 COL5A3P25940 1745 aaPredicted RBP18.37■□□□□ 0.53
SUPT16H-208ENST00000557652 NUP188Q5SRE5 1749 aa18.37■□□□□ 0.53
SUPT16H-208ENST00000557652 CACNA1FO60840 1977 aa18.37■□□□□ 0.53
SUPT16H-208ENST00000557652 TXNRD1Q16881 649 aa18.37■□□□□ 0.53
SUPT16H-208ENST00000557652 THUMPD2Q9BTF0 503 aaKnown RBP18.37■□□□□ 0.53
SUPT16H-208ENST00000557652 TSPYL4Q9UJ04 414 aa18.37■□□□□ 0.53
SUPT16H-208ENST00000557652 LAMB4A4D0S4 1761 aa18.37■□□□□ 0.53
SUPT16H-208ENST00000557652 HEG1Q9ULI3 1381 aa18.35■□□□□ 0.53
SUPT16H-208ENST00000557652 EN1Q05925 392 aaPredicted RBP18.35■□□□□ 0.53
SUPT16H-208ENST00000557652 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
SUPT16H-208ENST00000557652 CCNL1Q9UK58 526 aaPredicted RBP18.35■□□□□ 0.53
SUPT16H-208ENST00000557652 TJP1Q07157 1748 aa18.35■□□□□ 0.53
SUPT16H-208ENST00000557652 QSER1Q2KHR3 1735 aa18.35■□□□□ 0.53
SUPT16H-208ENST00000557652 ZBED9Q6R2W3 1325 aa18.34■□□□□ 0.53
SUPT16H-208ENST00000557652 HOXB7P09629 217 aa18.34■□□□□ 0.53
SUPT16H-208ENST00000557652 HNRNPUQ00839 825 aaKnown RBP eCLIP18.34■□□□□ 0.53
SUPT16H-208ENST00000557652 GOLGA2Q08379 1002 aa18.34■□□□□ 0.53
SUPT16H-208ENST00000557652 E9PSI1 815 aa18.33■□□□□ 0.52
SUPT16H-208ENST00000557652 SNRPA1P09661 255 aaKnown RBP18.33■□□□□ 0.52
SUPT16H-208ENST00000557652 ATP6V1AP38606 617 aa18.33■□□□□ 0.52
SUPT16H-208ENST00000557652 SLC39A6Q13433 755 aa18.33■□□□□ 0.52
SUPT16H-208ENST00000557652 DEFB132Q7Z7B7 95 aa18.33■□□□□ 0.52
SUPT16H-208ENST00000557652 ZNF496Q96IT1 587 aaPredicted RBP18.33■□□□□ 0.52
SUPT16H-208ENST00000557652 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.52
SUPT16H-208ENST00000557652 PTCD1O75127 700 aaKnown RBP18.32■□□□□ 0.52
SUPT16H-208ENST00000557652 EIF4A1P60842 406 aaKnown RBP18.32■□□□□ 0.52
SUPT16H-208ENST00000557652 EZH2Q15910 746 aaKnown RBP18.32■□□□□ 0.52
SUPT16H-208ENST00000557652 PROM2Q8N271 834 aa18.32■□□□□ 0.52
SUPT16H-208ENST00000557652 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
SUPT16H-208ENST00000557652 STARD3NLO95772 234 aa18.31■□□□□ 0.52
SUPT16H-208ENST00000557652 RC3H1Q5TC82 1133 aaKnown RBP18.31■□□□□ 0.52
SUPT16H-208ENST00000557652 MBIPQ9NS73 344 aa18.31■□□□□ 0.52
SUPT16H-208ENST00000557652 SALL2Q9Y467 1007 aaPredicted RBP18.31■□□□□ 0.52
SUPT16H-208ENST00000557652 MYH14Q7Z406 1995 aaKnown RBP18.31■□□□□ 0.52
SUPT16H-208ENST00000557652 CNTNAP4Q9C0A0 1308 aa18.3■□□□□ 0.52
SUPT16H-208ENST00000557652 NBPF14Q5TI25 921 aa18.3■□□□□ 0.52
SUPT16H-208ENST00000557652 LAS1LQ9Y4W2 734 aaKnown RBP18.3■□□□□ 0.52
SUPT16H-208ENST00000557652 UBR3Q6ZT12 1888 aa18.29■□□□□ 0.52
SUPT16H-208ENST00000557652 MIS18AQ9NYP9 233 aa18.29■□□□□ 0.52
SUPT16H-208ENST00000557652 ERBB4Q15303 1308 aa18.28■□□□□ 0.52
SUPT16H-208ENST00000557652 GIGYF1O75420 1035 aaPredicted RBP18.28■□□□□ 0.52
SUPT16H-208ENST00000557652 SLC4A9Q96Q91 983 aa18.28■□□□□ 0.52
SUPT16H-208ENST00000557652 LRRC4BQ9NT99 713 aa18.28■□□□□ 0.52
SUPT16H-208ENST00000557652 KCNQ3O43525 872 aa18.27■□□□□ 0.52
SUPT16H-208ENST00000557652 SLFN5Q08AF3 891 aa18.27■□□□□ 0.52
SUPT16H-208ENST00000557652 FANCIQ9NVI1 1328 aa18.26■□□□□ 0.51
SUPT16H-208ENST00000557652 ITPK1Q13572 414 aa18.26■□□□□ 0.51
SUPT16H-208ENST00000557652 FLAD1Q8NFF5 587 aa18.26■□□□□ 0.51
SUPT16H-208ENST00000557652 CT47B1P0C2W7 299 aaPredicted RBP18.25■□□□□ 0.51
SUPT16H-208ENST00000557652 CYP19A1P11511 503 aaPredicted RBP18.25■□□□□ 0.51
SUPT16H-208ENST00000557652 ADRA2BP18089 450 aa18.25■□□□□ 0.51
SUPT16H-208ENST00000557652 TRMT2AQ8IZ69 625 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms