RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 SLFN5Q08AF3 891 aa13.85□□□□□ -0.19
TGFB3-207ENST00000557493 PHACTR3Q96KR7 559 aa13.85□□□□□ -0.19
TGFB3-207ENST00000557493 CARD10Q9BWT7 1032 aa13.85□□□□□ -0.19
TGFB3-207ENST00000557493 IL16Q14005 1332 aa13.85□□□□□ -0.19
TGFB3-207ENST00000557493 CSB-PGBD3P0DP91 1061 aa13.84□□□□□ -0.19
TGFB3-207ENST00000557493 ZNF827Q17R98 1081 aa13.84□□□□□ -0.19
TGFB3-207ENST00000557493 GAS2L2Q8NHY3 880 aa13.84□□□□□ -0.19
TGFB3-207ENST00000557493 SLC16A10Q8TF71 515 aa13.84□□□□□ -0.19
TGFB3-207ENST00000557493 CDCA7LQ96GN5 454 aa13.84□□□□□ -0.19
TGFB3-207ENST00000557493 HSPA6P17066 643 aa13.83□□□□□ -0.2
TGFB3-207ENST00000557493 MYH16Q9H6N6 1097 aa13.83□□□□□ -0.2
TGFB3-207ENST00000557493 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
TGFB3-207ENST00000557493 AXIN2Q9Y2T1 843 aa13.83□□□□□ -0.2
TGFB3-207ENST00000557493 TNS2Q63HR2 1409 aa13.82□□□□□ -0.2
TGFB3-207ENST00000557493 ATP10DQ9P241 1426 aa13.82□□□□□ -0.2
TGFB3-207ENST00000557493 NBPF6Q5VWK0 638 aa13.82□□□□□ -0.2
TGFB3-207ENST00000557493 DUSP27Q5VZP5 1158 aa13.82□□□□□ -0.2
TGFB3-207ENST00000557493 NLGN2Q8NFZ4 835 aa13.82□□□□□ -0.2
TGFB3-207ENST00000557493 NBPF4Q96M43 638 aa13.82□□□□□ -0.2
TGFB3-207ENST00000557493 PAPPAQ13219 1627 aa13.82□□□□□ -0.2
TGFB3-207ENST00000557493 NEFLP07196 543 aa13.81□□□□□ -0.2
TGFB3-207ENST00000557493 TRMT2AQ8IZ69 625 aaKnown RBP13.81□□□□□ -0.2
TGFB3-207ENST00000557493 USHBP1Q8N6Y0 703 aa13.81□□□□□ -0.2
TGFB3-207ENST00000557493 ACSBG1Q96GR2 724 aa13.81□□□□□ -0.2
TGFB3-207ENST00000557493 GPBP1L1Q9HC44 474 aaPredicted RBP13.81□□□□□ -0.2
TGFB3-207ENST00000557493 WNK3Q9BYP7 1800 aa13.8□□□□□ -0.2
TGFB3-207ENST00000557493 HTATSF1O43719 755 aaKnown RBP13.79□□□□□ -0.2
TGFB3-207ENST00000557493 YBX3P16989 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
TGFB3-207ENST00000557493 AMOTQ4VCS5 1084 aa13.79□□□□□ -0.2
TGFB3-207ENST00000557493 NLRP2Q9NX02 1062 aa13.79□□□□□ -0.2
TGFB3-207ENST00000557493 NHSQ6T4R5 1651 aa13.79□□□□□ -0.2
TGFB3-207ENST00000557493 MTHFSDQ2M296 383 aaKnown RBP13.78□□□□□ -0.2
TGFB3-207ENST00000557493 RTF1Q92541 710 aaKnown RBP13.78□□□□□ -0.2
TGFB3-207ENST00000557493 AKT1S1Q96B36 256 aa13.78□□□□□ -0.2
TGFB3-207ENST00000557493 SPINK5Q9NQ38 1064 aaPredicted RBP13.78□□□□□ -0.2
TGFB3-207ENST00000557493 LRRC4BQ9NT99 713 aa13.78□□□□□ -0.2
TGFB3-207ENST00000557493 RCAN3Q9UKA8 241 aa13.78□□□□□ -0.2
TGFB3-207ENST00000557493 PKD1L3Q7Z443 1732 aa13.78□□□□□ -0.2
TGFB3-207ENST00000557493 PLEKHO1Q53GL0 409 aaPredicted RBP13.77□□□□□ -0.21
TGFB3-207ENST00000557493 PNPLA7Q6ZV29 1317 aa13.77□□□□□ -0.21
TGFB3-207ENST00000557493 RAPGEF4Q8WZA2 1011 aa13.77□□□□□ -0.21
TGFB3-207ENST00000557493 IFT57Q9NWB7 429 aa13.77□□□□□ -0.21
TGFB3-207ENST00000557493 SUPT16HQ9Y5B9 1047 aaKnown RBP13.77□□□□□ -0.21
TGFB3-207ENST00000557493 GTF3C3Q9Y5Q9 886 aa13.77□□□□□ -0.21
TGFB3-207ENST00000557493 FANCIQ9NVI1 1328 aa13.76□□□□□ -0.21
TGFB3-207ENST00000557493 GNAT3A8MTJ3 354 aa13.76□□□□□ -0.21
TGFB3-207ENST00000557493 TATP17735 454 aaPredicted RBP13.76□□□□□ -0.21
TGFB3-207ENST00000557493 GNAI1P63096 354 aa13.76□□□□□ -0.21
TGFB3-207ENST00000557493 SLC27A3Q5K4L6 730 aa13.76□□□□□ -0.21
TGFB3-207ENST00000557493 TFCP2L1Q9NZI6 479 aa13.76□□□□□ -0.21
TGFB3-207ENST00000557493 MEGF6O75095 1541 aa13.75□□□□□ -0.21
TGFB3-207ENST00000557493 RNF123Q5XPI4 1314 aa13.75□□□□□ -0.21
TGFB3-207ENST00000557493 CT47B1P0C2W7 299 aaPredicted RBP13.75□□□□□ -0.21
TGFB3-207ENST00000557493 C1orf141Q5JVX7 400 aa13.74□□□□□ -0.21
TGFB3-207ENST00000557493 ZNF526Q8TF50 670 aaPredicted RBP13.74□□□□□ -0.21
TGFB3-207ENST00000557493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.74□□□□□ -0.21
TGFB3-207ENST00000557493 ADCY9O60503 1353 aa13.73□□□□□ -0.21
TGFB3-207ENST00000557493 ADAMTS7Q9UKP4 1686 aa13.73□□□□□ -0.21
TGFB3-207ENST00000557493 AKAP4Q5JQC9 854 aa13.73□□□□□ -0.21
TGFB3-207ENST00000557493 ZNF530Q6P9A1 599 aaPredicted RBP13.73□□□□□ -0.21
TGFB3-207ENST00000557493 CFAP44Q96MT7 982 aa13.73□□□□□ -0.21
TGFB3-207ENST00000557493 THUMPD2Q9BTF0 503 aaKnown RBP13.73□□□□□ -0.21
TGFB3-207ENST00000557493 VIRMAQ69YN4 1812 aaKnown RBP13.72□□□□□ -0.21
TGFB3-207ENST00000557493 ZNF853P0CG23 659 aa13.72□□□□□ -0.21
TGFB3-207ENST00000557493 IL2RBP14784 551 aa13.72□□□□□ -0.21
TGFB3-207ENST00000557493 TSR2Q969E8 191 aaKnown RBP13.72□□□□□ -0.21
TGFB3-207ENST00000557493 SPG7Q9UQ90 795 aa13.72□□□□□ -0.21
TGFB3-207ENST00000557493 RRP1P56182 461 aaKnown RBP13.71□□□□□ -0.21
TGFB3-207ENST00000557493 DCTN1Q14203 1278 aa13.71□□□□□ -0.21
TGFB3-207ENST00000557493 MCM10Q7L590 875 aa13.71□□□□□ -0.21
TGFB3-207ENST00000557493 LAS1LQ9Y4W2 734 aaKnown RBP13.71□□□□□ -0.21
TGFB3-207ENST00000557493 CEMIPQ8WUJ3 1361 aa13.71□□□□□ -0.22
TGFB3-207ENST00000557493 COL24A1Q17RW2 1714 aa13.7□□□□□ -0.22
TGFB3-207ENST00000557493 BTAF1O14981 1849 aa13.7□□□□□ -0.22
TGFB3-207ENST00000557493 APLP1P51693 650 aa13.7□□□□□ -0.22
TGFB3-207ENST00000557493 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.7□□□□□ -0.22
TGFB3-207ENST00000557493 QSER1Q2KHR3 1735 aa13.7□□□□□ -0.22
TGFB3-207ENST00000557493 MBIPQ9NS73 344 aa13.69□□□□□ -0.22
TGFB3-207ENST00000557493 BABAM1Q9NWV8 329 aa13.69□□□□□ -0.22
TGFB3-207ENST00000557493 SCN11AQ9UI33 1791 aa13.68□□□□□ -0.22
TGFB3-207ENST00000557493 CHL1O00533 1208 aa13.68□□□□□ -0.22
TGFB3-207ENST00000557493 EXOSC9Q06265 439 aaKnown RBP13.68□□□□□ -0.22
TGFB3-207ENST00000557493 FKBP8Q14318 412 aa13.68□□□□□ -0.22
TGFB3-207ENST00000557493 ERICH6BQ5W0A0 696 aa13.68□□□□□ -0.22
TGFB3-207ENST00000557493 ZNF428Q96B54 188 aa13.68□□□□□ -0.22
TGFB3-207ENST00000557493 CD2APQ9Y5K6 639 aa13.68□□□□□ -0.22
TGFB3-207ENST00000557493 KDM3BQ7LBC6 1761 aa13.68□□□□□ -0.22
TGFB3-207ENST00000557493 MRC1P22897 1456 aa13.67□□□□□ -0.22
TGFB3-207ENST00000557493 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
TGFB3-207ENST00000557493 PCDH11YQ9BZA8 1340 aa13.67□□□□□ -0.22
TGFB3-207ENST00000557493 HSP90AB1P08238 724 aaKnown RBP13.67□□□□□ -0.22
TGFB3-207ENST00000557493 IFNL2Q8IZJ0 200 aa13.67□□□□□ -0.22
TGFB3-207ENST00000557493 SIPA1L3O60292 1781 aaPredicted RBP13.67□□□□□ -0.22
TGFB3-207ENST00000557493 KIF3CO14782 793 aa13.66□□□□□ -0.22
TGFB3-207ENST00000557493 PHKG2P15735 406 aa13.66□□□□□ -0.22
TGFB3-207ENST00000557493 KCNQ4P56696 695 aa13.66□□□□□ -0.22
TGFB3-207ENST00000557493 TEFQ10587 303 aa13.66□□□□□ -0.22
TGFB3-207ENST00000557493 PPP4R3CPQ6ZMV5 832 aa13.66□□□□□ -0.22
TGFB3-207ENST00000557493 IL17REQ8NFR9 667 aa13.66□□□□□ -0.22
TGFB3-207ENST00000557493 SYTL4Q96C24 671 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms