RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 TRIM52Q96A61 297 aa8.21□□□□□ -1.1
PRPF39-212ENST00000557477 PURBQ96QR8 312 aaKnown RBP8.21□□□□□ -1.1
PRPF39-212ENST00000557477 KLF16Q9BXK1 252 aaPredicted RBP8.21□□□□□ -1.1
PRPF39-212ENST00000557477 ZFAND3Q9H8U3 227 aa8.21□□□□□ -1.1
PRPF39-212ENST00000557477 TOR4AQ9NXH8 423 aa8.21□□□□□ -1.1
PRPF39-212ENST00000557477 GFRA3O60609 400 aa8.2□□□□□ -1.1
PRPF39-212ENST00000557477 ADH1AP07327 375 aa8.2□□□□□ -1.1
PRPF39-212ENST00000557477 ARID4AP29374 1257 aaPredicted RBP8.2□□□□□ -1.1
PRPF39-212ENST00000557477 SERPINB4P48594 390 aa8.2□□□□□ -1.1
PRPF39-212ENST00000557477 EPHA4P54764 986 aa8.2□□□□□ -1.1
PRPF39-212ENST00000557477 C1orf216Q8TAB5 229 aa8.2□□□□□ -1.1
PRPF39-212ENST00000557477 CCER1Q8TC90 406 aaPredicted RBP8.2□□□□□ -1.1
PRPF39-212ENST00000557477 ZIC2O95409 532 aaPredicted RBP8.19□□□□□ -1.1
PRPF39-212ENST00000557477 IL2RAP01589 272 aa8.19□□□□□ -1.1
PRPF39-212ENST00000557477 SMPD1P17405 629 aa8.19□□□□□ -1.1
PRPF39-212ENST00000557477 WDR4P57081 412 aaKnown RBP8.19□□□□□ -1.1
PRPF39-212ENST00000557477 FKBP5Q13451 457 aaPredicted RBP8.19□□□□□ -1.1
PRPF39-212ENST00000557477 TAS1R3Q7RTX0 852 aa8.19□□□□□ -1.1
PRPF39-212ENST00000557477 MKNK1Q9BUB5 465 aa8.19□□□□□ -1.1
PRPF39-212ENST00000557477 BACH1O14867 736 aa8.18□□□□□ -1.1
PRPF39-212ENST00000557477 TIMP2P16035 220 aa8.18□□□□□ -1.1
PRPF39-212ENST00000557477 MFAP1P55081 439 aaKnown RBP8.18□□□□□ -1.1
PRPF39-212ENST00000557477 CAPN12Q6ZSI9 719 aa8.18□□□□□ -1.1
PRPF39-212ENST00000557477 Q6ZVU0 165 aa8.18□□□□□ -1.1
PRPF39-212ENST00000557477 SND1Q7KZF4 910 aaKnown RBP eCLIP8.18□□□□□ -1.1
PRPF39-212ENST00000557477 AGBL1Q96MI9 1066 aa8.18□□□□□ -1.1
PRPF39-212ENST00000557477 SLC4A9Q96Q91 983 aa8.18□□□□□ -1.1
PRPF39-212ENST00000557477 TSPAN10Q9H1Z9 355 aaPredicted RBP8.18□□□□□ -1.1
PRPF39-212ENST00000557477 C21orf2O43822 256 aa8.17□□□□□ -1.1
PRPF39-212ENST00000557477 ESCO1Q5FWF5 840 aa8.17□□□□□ -1.1
PRPF39-212ENST00000557477 SCG3Q8WXD2 468 aaKnown RBP8.17□□□□□ -1.1
PRPF39-212ENST00000557477 TBCELQ5QJ74 424 aa8.16□□□□□ -1.1
PRPF39-212ENST00000557477 Q6ZNB5 142 aa8.16□□□□□ -1.1
PRPF39-212ENST00000557477 CNKSR1Q969H4 720 aa8.16□□□□□ -1.1
PRPF39-212ENST00000557477 SEPT3Q9UH03 358 aa8.16□□□□□ -1.1
PRPF39-212ENST00000557477 USP3Q9Y6I4 520 aa8.16□□□□□ -1.1
PRPF39-212ENST00000557477 A0A1W2PRU2 124 aa8.15□□□□□ -1.1
PRPF39-212ENST00000557477 A6NJY4 79 aa8.15□□□□□ -1.1
PRPF39-212ENST00000557477 IGFBP4P22692 258 aa8.15□□□□□ -1.1
PRPF39-212ENST00000557477 SMTNP53814 917 aa8.15□□□□□ -1.1
PRPF39-212ENST00000557477 FOXK2Q01167 660 aa8.15□□□□□ -1.1
PRPF39-212ENST00000557477 RELBQ01201 579 aa8.15□□□□□ -1.1
PRPF39-212ENST00000557477 CLN3Q13286 438 aa8.15□□□□□ -1.1
PRPF39-212ENST00000557477 HPS1Q92902 700 aa8.15□□□□□ -1.1
PRPF39-212ENST00000557477 XAGE2Q96GT9 111 aa8.15□□□□□ -1.1
PRPF39-212ENST00000557477 SCHIP1Q9P0W5 487 aaPredicted RBP8.15□□□□□ -1.1
PRPF39-212ENST00000557477 HRH3Q9Y5N1 445 aa8.15□□□□□ -1.1
PRPF39-212ENST00000557477 FAM187AA6NFU0 413 aa8.14□□□□□ -1.11
PRPF39-212ENST00000557477 SOWAHDA6NJG2 315 aa8.14□□□□□ -1.11
PRPF39-212ENST00000557477 PTGIRP43119 386 aa8.14□□□□□ -1.11
PRPF39-212ENST00000557477 ZNF211Q13398 564 aaPredicted RBP8.14□□□□□ -1.11
PRPF39-212ENST00000557477 MTFR1Q15390 333 aa8.14□□□□□ -1.11
PRPF39-212ENST00000557477 TLR1Q15399 786 aa8.14□□□□□ -1.11
PRPF39-212ENST00000557477 SLC9A9Q8IVB4 645 aa8.14□□□□□ -1.11
PRPF39-212ENST00000557477 ESYT1Q9BSJ8 1104 aa8.14□□□□□ -1.11
PRPF39-212ENST00000557477 ATAD2Q6PL18 1390 aa8.13□□□□□ -1.11
PRPF39-212ENST00000557477 MEN1O00255 615 aa8.13□□□□□ -1.11
PRPF39-212ENST00000557477 LCE2BO14633 110 aa8.13□□□□□ -1.11
PRPF39-212ENST00000557477 ABL1P00519 1130 aa8.13□□□□□ -1.11
PRPF39-212ENST00000557477 MEIOBQ8N635 442 aa8.13□□□□□ -1.11
PRPF39-212ENST00000557477 CHMP7Q8WUX9 453 aaPredicted RBP8.13□□□□□ -1.11
PRPF39-212ENST00000557477 ZNF395Q9H8N7 513 aaPredicted RBP8.13□□□□□ -1.11
PRPF39-212ENST00000557477 ANO2Q9NQ90 1003 aa8.13□□□□□ -1.11
PRPF39-212ENST00000557477 IQSEC3Q9UPP2 1182 aaPredicted RBP8.13□□□□□ -1.11
PRPF39-212ENST00000557477 FOXO3O43524 673 aa8.12□□□□□ -1.11
PRPF39-212ENST00000557477 PPP1R12BO60237 982 aaPredicted RBP8.12□□□□□ -1.11
PRPF39-212ENST00000557477 CCDC27Q2M243 656 aa8.12□□□□□ -1.11
PRPF39-212ENST00000557477 RGS22Q8NE09 1264 aa8.12□□□□□ -1.11
PRPF39-212ENST00000557477 GTF3C2Q8WUA4 911 aaPredicted RBP8.12□□□□□ -1.11
PRPF39-212ENST00000557477 FHDC1Q9C0D6 1143 aaPredicted RBP8.12□□□□□ -1.11
PRPF39-212ENST00000557477 MTMR7Q9Y216 660 aa8.12□□□□□ -1.11
PRPF39-212ENST00000557477 CENPCQ03188 943 aa8.11□□□□□ -1.11
PRPF39-212ENST00000557477 MTMR3Q13615 1198 aa8.11□□□□□ -1.11
PRPF39-212ENST00000557477 NAA30Q147X3 362 aaPredicted RBP8.11□□□□□ -1.11
PRPF39-212ENST00000557477 DNMT3AQ9Y6K1 912 aaPredicted RBP8.11□□□□□ -1.11
PRPF39-212ENST00000557477 H3BRB1 525 aa8.1□□□□□ -1.11
PRPF39-212ENST00000557477 NRG2O14511 850 aaPredicted RBP8.1□□□□□ -1.11
PRPF39-212ENST00000557477 PTCD1O75127 700 aaKnown RBP8.1□□□□□ -1.11
PRPF39-212ENST00000557477 PKDCCQ504Y2 493 aa8.1□□□□□ -1.11
PRPF39-212ENST00000557477 COL26A1Q96A83 441 aa8.1□□□□□ -1.11
PRPF39-212ENST00000557477 TUT1Q9H6E5 874 aaKnown RBP8.1□□□□□ -1.11
PRPF39-212ENST00000557477 CDK2AP1O14519 115 aa8.09□□□□□ -1.11
PRPF39-212ENST00000557477 CAPN5O15484 640 aaPredicted RBP8.09□□□□□ -1.11
PRPF39-212ENST00000557477 PSMA6P60900 246 aaKnown RBP8.09□□□□□ -1.11
PRPF39-212ENST00000557477 SH3PXD2AQ5TCZ1 1133 aa8.09□□□□□ -1.11
PRPF39-212ENST00000557477 ZNF295-AS1Q8N0V1 137 aa8.09□□□□□ -1.11
PRPF39-212ENST00000557477 NLRP3Q96P20 1036 aa8.09□□□□□ -1.11
PRPF39-212ENST00000557477 C2orf49Q9BVC5 232 aaPredicted RBP8.09□□□□□ -1.11
PRPF39-212ENST00000557477 EGFL7Q9UHF1 273 aa8.09□□□□□ -1.11
PRPF39-212ENST00000557477 ICMTO60725 284 aa8.08□□□□□ -1.12
PRPF39-212ENST00000557477 ZDHHC1Q8WTX9 485 aa8.08□□□□□ -1.12
PRPF39-212ENST00000557477 VTI1AQ96AJ9 217 aa8.08□□□□□ -1.12
PRPF39-212ENST00000557477 INSM2Q96T92 566 aaPredicted RBP8.08□□□□□ -1.12
PRPF39-212ENST00000557477 SAP130Q9H0E3 1048 aa8.08□□□□□ -1.12
PRPF39-212ENST00000557477 BIN2Q9UBW5 565 aaPredicted RBP8.08□□□□□ -1.12
PRPF39-212ENST00000557477 DGAT1O75907 488 aa8.07□□□□□ -1.12
PRPF39-212ENST00000557477 LAPTM4AQ15012 233 aa8.07□□□□□ -1.12
PRPF39-212ENST00000557477 FOXD4L5Q5VV16 416 aaPredicted RBP8.07□□□□□ -1.12
PRPF39-212ENST00000557477 STAG2Q8N3U4 1231 aa8.07□□□□□ -1.12
PRPF39-212ENST00000557477 NBPF15Q8N660 670 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms