RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TSHZ2Q9NRE2 1034 aa8.45□□□□□ -1.06
VPS33B-207ENST00000557470 TNS2Q63HR2 1409 aa8.45□□□□□ -1.06
VPS33B-207ENST00000557470 NFAT5O94916 1531 aa8.44□□□□□ -1.06
VPS33B-207ENST00000557470 TRPM1Q7Z4N2 1603 aa8.44□□□□□ -1.06
VPS33B-207ENST00000557470 RGPD5Q99666 1765 aa8.44□□□□□ -1.06
VPS33B-207ENST00000557470 EXOC5O00471 708 aa8.44□□□□□ -1.06
VPS33B-207ENST00000557470 TTC21BQ7Z4L5 1316 aa8.44□□□□□ -1.06
VPS33B-207ENST00000557470 PAPPAQ13219 1627 aa8.43□□□□□ -1.06
VPS33B-207ENST00000557470 SENP3-EIF4A1A0A087X0R7 540 aa8.43□□□□□ -1.06
VPS33B-207ENST00000557470 SNPHO15079 494 aa8.43□□□□□ -1.06
VPS33B-207ENST00000557470 TMEM92Q6UXU6 159 aa8.43□□□□□ -1.06
VPS33B-207ENST00000557470 SPRYD3Q8NCJ5 442 aa8.43□□□□□ -1.06
VPS33B-207ENST00000557470 KCNH5Q8NCM2 988 aa8.43□□□□□ -1.06
VPS33B-207ENST00000557470 EVC2Q86UK5 1308 aa8.43□□□□□ -1.06
VPS33B-207ENST00000557470 CCDC7Q96M83 1385 aa8.43□□□□□ -1.06
VPS33B-207ENST00000557470 ABCC6O95255 1503 aa8.43□□□□□ -1.06
VPS33B-207ENST00000557470 NHSQ6T4R5 1651 aa8.43□□□□□ -1.06
VPS33B-207ENST00000557470 ZNF827Q17R98 1081 aa8.42□□□□□ -1.06
VPS33B-207ENST00000557470 ACSBG1Q96GR2 724 aa8.42□□□□□ -1.06
VPS33B-207ENST00000557470 MAP3K5Q99683 1374 aa8.42□□□□□ -1.06
VPS33B-207ENST00000557470 TTC21AQ8NDW8 1320 aa8.41□□□□□ -1.06
VPS33B-207ENST00000557470 C1QTNF8P60827 252 aa8.41□□□□□ -1.06
VPS33B-207ENST00000557470 MARVELD3Q96A59 401 aa8.41□□□□□ -1.06
VPS33B-207ENST00000557470 GOLGB1Q14789 3259 aaKnown RBP8.41□□□□□ -1.06
VPS33B-207ENST00000557470 CHD4Q14839 1912 aa8.41□□□□□ -1.06
VPS33B-207ENST00000557470 CEP350Q5VT06 3117 aa8.4□□□□□ -1.06
VPS33B-207ENST00000557470 ERBB3P21860 1342 aa8.4□□□□□ -1.06
VPS33B-207ENST00000557470 PLSCR2Q9NRY7 297 aa8.4□□□□□ -1.06
VPS33B-207ENST00000557470 LRRC4BQ9NT99 713 aa8.4□□□□□ -1.06
VPS33B-207ENST00000557470 NLRP2Q9NX02 1062 aa8.4□□□□□ -1.06
VPS33B-207ENST00000557470 KTN1Q86UP2 1357 aaKnown RBP8.39□□□□□ -1.07
VPS33B-207ENST00000557470 BTAF1O14981 1849 aa8.39□□□□□ -1.07
VPS33B-207ENST00000557470 HOXB3P14651 431 aaPredicted RBP8.39□□□□□ -1.07
VPS33B-207ENST00000557470 IL2RBP14784 551 aa8.39□□□□□ -1.07
VPS33B-207ENST00000557470 GPR162Q16538 588 aa8.38□□□□□ -1.07
VPS33B-207ENST00000557470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.38□□□□□ -1.07
VPS33B-207ENST00000557470 L3MBTL2Q969R5 705 aa8.38□□□□□ -1.07
VPS33B-207ENST00000557470 MON2Q7Z3U7 1717 aa8.37□□□□□ -1.07
VPS33B-207ENST00000557470 ROCK2O75116 1388 aaKnown RBP8.37□□□□□ -1.07
VPS33B-207ENST00000557470 USP31Q70CQ4 1352 aa8.37□□□□□ -1.07
VPS33B-207ENST00000557470 NME9Q86XW9 330 aa8.37□□□□□ -1.07
VPS33B-207ENST00000557470 ANKRD24Q8TF21 1146 aa8.37□□□□□ -1.07
VPS33B-207ENST00000557470 CD163L1Q9NR16 1453 aa8.37□□□□□ -1.07
VPS33B-207ENST00000557470 USP54Q70EL1 1684 aa8.37□□□□□ -1.07
VPS33B-207ENST00000557470 SBNO2Q9Y2G9 1366 aa8.36□□□□□ -1.07
VPS33B-207ENST00000557470 PNPLA7Q6ZV29 1317 aa8.36□□□□□ -1.07
VPS33B-207ENST00000557470 GIGYF1O75420 1035 aaPredicted RBP8.36□□□□□ -1.07
VPS33B-207ENST00000557470 CDAN1Q8IWY9 1227 aa8.36□□□□□ -1.07
VPS33B-207ENST00000557470 HS6ST3Q8IZP7 471 aa8.36□□□□□ -1.07
VPS33B-207ENST00000557470 PCDH10Q9P2E7 1040 aa8.36□□□□□ -1.07
VPS33B-207ENST00000557470 LTN1O94822 1766 aa8.35□□□□□ -1.07
VPS33B-207ENST00000557470 PPP1R37O75864 691 aa8.35□□□□□ -1.07
VPS33B-207ENST00000557470 POLD1P28340 1107 aa8.35□□□□□ -1.07
VPS33B-207ENST00000557470 KCNQ4P56696 695 aa8.35□□□□□ -1.07
VPS33B-207ENST00000557470 SLC27A3Q5K4L6 730 aa8.35□□□□□ -1.07
VPS33B-207ENST00000557470 NLGN2Q8NFZ4 835 aa8.35□□□□□ -1.07
VPS33B-207ENST00000557470 SLC16A10Q8TF71 515 aa8.35□□□□□ -1.07
VPS33B-207ENST00000557470 COL24A1Q17RW2 1714 aa8.34□□□□□ -1.07
VPS33B-207ENST00000557470 QSER1Q2KHR3 1735 aa8.34□□□□□ -1.07
VPS33B-207ENST00000557470 SHANK3Q9BYB0 1731 aa8.34□□□□□ -1.07
VPS33B-207ENST00000557470 TUBGCP6Q96RT7 1819 aa8.34□□□□□ -1.07
VPS33B-207ENST00000557470 DDX54Q8TDD1 881 aaKnown RBP8.34□□□□□ -1.07
VPS33B-207ENST00000557470 TFCP2L1Q9NZI6 479 aa8.34□□□□□ -1.07
VPS33B-207ENST00000557470 KAT6BQ8WYB5 2073 aa8.33□□□□□ -1.08
VPS33B-207ENST00000557470 YBX3P16989 372 aaKnown RBP eCLIP8.33□□□□□ -1.08
VPS33B-207ENST00000557470 IFFO2Q5TF58 517 aa8.33□□□□□ -1.08
VPS33B-207ENST00000557470 EDC4Q6P2E9 1401 aaKnown RBP8.33□□□□□ -1.08
VPS33B-207ENST00000557470 SYTL4Q96C24 671 aaPredicted RBP8.33□□□□□ -1.08
VPS33B-207ENST00000557470 SIN3AQ96ST3 1273 aa8.33□□□□□ -1.08
VPS33B-207ENST00000557470 NSD2O96028 1365 aa8.33□□□□□ -1.08
VPS33B-207ENST00000557470 PRIM1P49642 420 aaKnown RBP8.32□□□□□ -1.08
VPS33B-207ENST00000557470 HDGFL2Q7Z4V5 671 aaPredicted RBP8.32□□□□□ -1.08
VPS33B-207ENST00000557470 TMC1Q8TDI8 760 aa8.32□□□□□ -1.08
VPS33B-207ENST00000557470 IP6K1Q92551 441 aa8.32□□□□□ -1.08
VPS33B-207ENST00000557470 LTV1Q96GA3 475 aaPredicted RBP8.32□□□□□ -1.08
VPS33B-207ENST00000557470 SLC12A5Q9H2X9 1139 aa8.32□□□□□ -1.08
VPS33B-207ENST00000557470 A0A1W2PP64 1363 aa8.32□□□□□ -1.08
VPS33B-207ENST00000557470 ANKRD36BQ8N2N9 1353 aa8.32□□□□□ -1.08
VPS33B-207ENST00000557470 DOT1LQ8TEK3 1739 aa8.32□□□□□ -1.08
VPS33B-207ENST00000557470 POTEB3A0JP26 581 aa8.31□□□□□ -1.08
VPS33B-207ENST00000557470 EMP3P54852 163 aa8.31□□□□□ -1.08
VPS33B-207ENST00000557470 NKX1-1Q15270 411 aaPredicted RBP8.31□□□□□ -1.08
VPS33B-207ENST00000557470 POTEBQ6S5H4 581 aa8.31□□□□□ -1.08
VPS33B-207ENST00000557470 CCNL1Q9UK58 526 aaPredicted RBP8.31□□□□□ -1.08
VPS33B-207ENST00000557470 LY75O60449 1722 aa8.31□□□□□ -1.08
VPS33B-207ENST00000557470 FAM208AQ9UK61 1670 aaKnown RBP8.3□□□□□ -1.08
VPS33B-207ENST00000557470 ATP10DQ9P241 1426 aa8.3□□□□□ -1.08
VPS33B-207ENST00000557470 MEGF6O75095 1541 aa8.3□□□□□ -1.08
VPS33B-207ENST00000557470 NEUROD1Q13562 356 aa8.3□□□□□ -1.08
VPS33B-207ENST00000557470 DOK7Q18PE1 504 aa8.3□□□□□ -1.08
VPS33B-207ENST00000557470 MSL1Q68DK7 614 aa8.3□□□□□ -1.08
VPS33B-207ENST00000557470 COL23A1Q86Y22 540 aaPredicted RBP8.3□□□□□ -1.08
VPS33B-207ENST00000557470 MAP3K19Q56UN5 1328 aa8.29□□□□□ -1.08
VPS33B-207ENST00000557470 GRIN3BO60391 1043 aa8.29□□□□□ -1.08
VPS33B-207ENST00000557470 HOXC9P31274 260 aa8.29□□□□□ -1.08
VPS33B-207ENST00000557470 ZNF710Q8N1W2 664 aa8.29□□□□□ -1.08
VPS33B-207ENST00000557470 ZCRB1Q8TBF4 217 aaKnown RBP8.29□□□□□ -1.08
VPS33B-207ENST00000557470 TERF2IPQ9NYB0 399 aa8.29□□□□□ -1.08
VPS33B-207ENST00000557470 USP47Q96K76 1375 aa8.28□□□□□ -1.08
VPS33B-207ENST00000557470 C2orf72A6NCS6 295 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms