RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 BAG4O95429 457 aaKnown RBP21.81■■□□□ 1.08
XRCC3-218ENST00000557439 MRE11P49959 708 aa21.81■■□□□ 1.08
XRCC3-218ENST00000557439 TBX22Q9Y458 520 aa21.81■■□□□ 1.08
XRCC3-218ENST00000557439 CASC1Q6TDU7 716 aa21.8■■□□□ 1.08
XRCC3-218ENST00000557439 LRRFIP2Q9Y608 721 aaKnown RBP21.8■■□□□ 1.08
XRCC3-218ENST00000557439 PHAXQ9H814 394 aaKnown RBP21.79■■□□□ 1.08
XRCC3-218ENST00000557439 FOXD4L5Q5VV16 416 aaPredicted RBP21.79■■□□□ 1.08
XRCC3-218ENST00000557439 MCTP1Q6DN14 999 aa21.79■■□□□ 1.08
XRCC3-218ENST00000557439 FOXD4L4Q8WXT5 416 aaPredicted RBP21.79■■□□□ 1.08
XRCC3-218ENST00000557439 ERC2O15083 957 aa21.78■■□□□ 1.08
XRCC3-218ENST00000557439 NOL8Q76FK4 1167 aaKnown RBP21.78■■□□□ 1.08
XRCC3-218ENST00000557439 EIF5BO60841 1220 aaKnown RBP21.77■■□□□ 1.08
XRCC3-218ENST00000557439 CCDC30Q5VVM6 783 aa21.77■■□□□ 1.08
XRCC3-218ENST00000557439 RILPL2Q969X0 211 aa21.77■■□□□ 1.08
XRCC3-218ENST00000557439 IL1RAPL2Q9NP60 686 aa21.77■■□□□ 1.08
XRCC3-218ENST00000557439 UNC5CLQ8IV45 518 aa21.76■■□□□ 1.07
XRCC3-218ENST00000557439 DDX49Q9Y6V7 483 aaKnown RBP21.76■■□□□ 1.07
XRCC3-218ENST00000557439 EIF2S2P20042 333 aaKnown RBP21.76■■□□□ 1.07
XRCC3-218ENST00000557439 LRRCC1Q9C099 1032 aa21.76■■□□□ 1.07
XRCC3-218ENST00000557439 TRIM6-TRIM34B2RNG4 842 aa21.75■■□□□ 1.07
XRCC3-218ENST00000557439 REC8O95072 547 aa21.75■■□□□ 1.07
XRCC3-218ENST00000557439 PALD1Q9ULE6 856 aa21.75■■□□□ 1.07
XRCC3-218ENST00000557439 ANXA1P04083 346 aa21.74■■□□□ 1.07
XRCC3-218ENST00000557439 NCLP19338 710 aaKnown RBP21.74■■□□□ 1.07
XRCC3-218ENST00000557439 NWD1Q149M9 1564 aa21.74■■□□□ 1.07
XRCC3-218ENST00000557439 MAP4K4O95819 1239 aaPredicted RBP21.74■■□□□ 1.07
XRCC3-218ENST00000557439 MX1P20591 662 aa21.74■■□□□ 1.07
XRCC3-218ENST00000557439 USP44Q9H0E7 712 aa21.74■■□□□ 1.07
XRCC3-218ENST00000557439 SALL3Q9BXA9 1300 aa21.74■■□□□ 1.07
XRCC3-218ENST00000557439 OSBPL3Q9H4L5 887 aa21.73■■□□□ 1.07
XRCC3-218ENST00000557439 MAP3K5Q99683 1374 aa21.73■■□□□ 1.07
XRCC3-218ENST00000557439 ST18O60284 1047 aa21.73■■□□□ 1.07
XRCC3-218ENST00000557439 NEK4P51957 841 aa21.73■■□□□ 1.07
XRCC3-218ENST00000557439 ATP8B2P98198 1209 aa21.73■■□□□ 1.07
XRCC3-218ENST00000557439 TAF7Q15545 349 aaPredicted RBP21.73■■□□□ 1.07
XRCC3-218ENST00000557439 HDGFL1Q5TGJ6 251 aa21.73■■□□□ 1.07
XRCC3-218ENST00000557439 LGR6Q9HBX8 967 aa21.73■■□□□ 1.07
XRCC3-218ENST00000557439 FAM208AQ9UK61 1670 aaKnown RBP21.72■■□□□ 1.07
XRCC3-218ENST00000557439 KCNQ3O43525 872 aa21.72■■□□□ 1.07
XRCC3-218ENST00000557439 NUTM1Q86Y26 1132 aa21.72■■□□□ 1.07
XRCC3-218ENST00000557439 IL25Q9H293 177 aa21.72■■□□□ 1.07
XRCC3-218ENST00000557439 ZDHHC9Q9Y397 364 aa21.72■■□□□ 1.07
XRCC3-218ENST00000557439 ARHGAP23Q9P227 1491 aa21.72■■□□□ 1.07
XRCC3-218ENST00000557439 SKOR2Q2VWA4 1001 aaPredicted RBP21.72■■□□□ 1.07
XRCC3-218ENST00000557439 THEMISQ8N1K5 641 aaPredicted RBP21.72■■□□□ 1.07
XRCC3-218ENST00000557439 MARF1Q9Y4F3 1742 aaKnown RBP21.71■■□□□ 1.07
XRCC3-218ENST00000557439 SLIT1O75093 1534 aa21.71■■□□□ 1.07
XRCC3-218ENST00000557439 GNAI3P08754 354 aa21.71■■□□□ 1.07
XRCC3-218ENST00000557439 XRN1Q8IZH2 1706 aaKnown RBP21.71■■□□□ 1.07
XRCC3-218ENST00000557439 GOLGA6L22H0YM25 854 aa21.71■■□□□ 1.07
XRCC3-218ENST00000557439 CYP2E1P05181 493 aaPredicted RBP21.71■■□□□ 1.07
XRCC3-218ENST00000557439 ESYT1Q9BSJ8 1104 aa21.71■■□□□ 1.07
XRCC3-218ENST00000557439 ANO2Q9NQ90 1003 aa21.71■■□□□ 1.07
XRCC3-218ENST00000557439 ERBB4Q15303 1308 aa21.7■■□□□ 1.06
XRCC3-218ENST00000557439 NBPF6Q5VWK0 638 aa21.69■■□□□ 1.06
XRCC3-218ENST00000557439 CAVIN1Q6NZI2 390 aaKnown RBP21.69■■□□□ 1.06
XRCC3-218ENST00000557439 NBPF4Q96M43 638 aa21.69■■□□□ 1.06
XRCC3-218ENST00000557439 IBTKQ9P2D0 1353 aaPredicted RBP21.69■■□□□ 1.06
XRCC3-218ENST00000557439 UBTFL1P0CB47 393 aaPredicted RBP21.69■■□□□ 1.06
XRCC3-218ENST00000557439 LRRC37A3O60309 1634 aa21.69■■□□□ 1.06
XRCC3-218ENST00000557439 HTATSF1O43719 755 aaKnown RBP21.68■■□□□ 1.06
XRCC3-218ENST00000557439 LRRC59Q96AG4 307 aaKnown RBP21.68■■□□□ 1.06
XRCC3-218ENST00000557439 CHMLP26374 656 aa21.68■■□□□ 1.06
XRCC3-218ENST00000557439 NUCB2P80303 420 aa21.68■■□□□ 1.06
XRCC3-218ENST00000557439 CLEC17AQ6ZS10 378 aa21.68■■□□□ 1.06
XRCC3-218ENST00000557439 LMBRD1Q9NUN5 540 aa21.68■■□□□ 1.06
XRCC3-218ENST00000557439 PRPF40AO75400 957 aaKnown RBP21.67■■□□□ 1.06
XRCC3-218ENST00000557439 KLHL40Q2TBA0 621 aa21.67■■□□□ 1.06
XRCC3-218ENST00000557439 UPF3BQ9BZI7 483 aaKnown RBP21.67■■□□□ 1.06
XRCC3-218ENST00000557439 RBM27Q9P2N5 1060 aaKnown RBP21.67■■□□□ 1.06
XRCC3-218ENST00000557439 XPCQ01831 940 aaPredicted RBP21.67■■□□□ 1.06
XRCC3-218ENST00000557439 TMX3Q96JJ7 454 aa21.67■■□□□ 1.06
XRCC3-218ENST00000557439 NBPF7P0C2Y1 421 aaPredicted RBP21.66■■□□□ 1.06
XRCC3-218ENST00000557439 PPP1R42Q7Z4L9 355 aa21.66■■□□□ 1.06
XRCC3-218ENST00000557439 CHPF2Q9P2E5 772 aa21.66■■□□□ 1.06
XRCC3-218ENST00000557439 SURF6O75683 361 aaKnown RBP21.65■■□□□ 1.06
XRCC3-218ENST00000557439 PHF8Q9UPP1 1060 aa21.65■■□□□ 1.06
XRCC3-218ENST00000557439 FOXD4L6Q3SYB3 417 aaPredicted RBP21.65■■□□□ 1.06
XRCC3-218ENST00000557439 FOXD4L3Q6VB84 417 aaPredicted RBP21.65■■□□□ 1.06
XRCC3-218ENST00000557439 MPRIPQ6WCQ1 1025 aa21.64■■□□□ 1.05
XRCC3-218ENST00000557439 NSFL1CQ9UNZ2 370 aaKnown RBP21.64■■□□□ 1.05
XRCC3-218ENST00000557439 TUBGCP6Q96RT7 1819 aa21.63■■□□□ 1.05
XRCC3-218ENST00000557439 GPT2Q8TD30 523 aa21.63■■□□□ 1.05
XRCC3-218ENST00000557439 PI4KAP2A4QPH2 592 aa21.62■■□□□ 1.05
XRCC3-218ENST00000557439 PI4KAP1Q8N8J0 262 aa21.62■■□□□ 1.05
XRCC3-218ENST00000557439 FER1L4A9Z1Z3 1794 aa21.62■■□□□ 1.05
XRCC3-218ENST00000557439 SRGAP3O43295 1099 aa21.62■■□□□ 1.05
XRCC3-218ENST00000557439 PTMSP20962 102 aa21.62■■□□□ 1.05
XRCC3-218ENST00000557439 SRCIN1Q9C0H9 1055 aa21.62■■□□□ 1.05
XRCC3-218ENST00000557439 SOS1Q07889 1333 aaPredicted RBP21.62■■□□□ 1.05
XRCC3-218ENST00000557439 DTNBO60941 627 aa21.61■■□□□ 1.05
XRCC3-218ENST00000557439 EIF4A1P60842 406 aaKnown RBP21.61■■□□□ 1.05
XRCC3-218ENST00000557439 CWC22Q9HCG8 908 aaKnown RBP21.61■■□□□ 1.05
XRCC3-218ENST00000557439 ISY1Q9ULR0 285 aaKnown RBP21.61■■□□□ 1.05
XRCC3-218ENST00000557439 LTN1O94822 1766 aa21.61■■□□□ 1.05
XRCC3-218ENST00000557439 NASPP49321 788 aaPredicted RBP21.61■■□□□ 1.05
XRCC3-218ENST00000557439 ZSCAN23Q3MJ62 389 aa21.61■■□□□ 1.05
XRCC3-218ENST00000557439 ESCO1Q5FWF5 840 aa21.61■■□□□ 1.05
XRCC3-218ENST00000557439 SSH3Q8TE77 659 aa21.61■■□□□ 1.05
XRCC3-218ENST00000557439 LARP6Q9BRS8 491 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms