RNA–Protein interactions for RNA: ENST00000557437.1

SEC23A-214, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-214ENST00000557437 AMIGO3Q86WK7 504 aa20.24■□□□□ 0.83
SEC23A-214ENST00000557437 UBR3Q6ZT12 1888 aa20.24■□□□□ 0.83
SEC23A-214ENST00000557437 CABP4P57796 275 aa20.23■□□□□ 0.83
SEC23A-214ENST00000557437 CNGB1Q14028 1251 aaPredicted RBP20.23■□□□□ 0.83
SEC23A-214ENST00000557437 AKAP4Q5JQC9 854 aa20.23■□□□□ 0.83
SEC23A-214ENST00000557437 SLC4A9Q96Q91 983 aa20.23■□□□□ 0.83
SEC23A-214ENST00000557437 SCN11AQ9UI33 1791 aa20.23■□□□□ 0.83
SEC23A-214ENST00000557437 POLD1P28340 1107 aa20.22■□□□□ 0.83
SEC23A-214ENST00000557437 ATP6V1AP38606 617 aa20.22■□□□□ 0.83
SEC23A-214ENST00000557437 AK7Q96M32 723 aa20.22■□□□□ 0.83
SEC23A-214ENST00000557437 UTRNP46939 3433 aa20.21■□□□□ 0.83
SEC23A-214ENST00000557437 NFATC2IPQ8NCF5 419 aa20.21■□□□□ 0.83
SEC23A-214ENST00000557437 ADAMTS7Q9UKP4 1686 aa20.21■□□□□ 0.83
SEC23A-214ENST00000557437 SSFA2P28290 1259 aa20.2■□□□□ 0.82
SEC23A-214ENST00000557437 MTHFSDQ2M296 383 aaKnown RBP20.2■□□□□ 0.82
SEC23A-214ENST00000557437 MRC1P22897 1456 aa20.19■□□□□ 0.82
SEC23A-214ENST00000557437 MSH5O43196 834 aa20.19■□□□□ 0.82
SEC23A-214ENST00000557437 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.18■□□□□ 0.82
SEC23A-214ENST00000557437 PPP2R1AP30153 589 aa20.18■□□□□ 0.82
SEC23A-214ENST00000557437 LGR6Q9HBX8 967 aa20.18■□□□□ 0.82
SEC23A-214ENST00000557437 COL5A3P25940 1745 aaPredicted RBP20.18■□□□□ 0.82
SEC23A-214ENST00000557437 CICQ96RK0 1608 aaPredicted RBP20.17■□□□□ 0.82
SEC23A-214ENST00000557437 SMIM5Q71RC9 77 aa20.17■□□□□ 0.82
SEC23A-214ENST00000557437 DCAF8L1A6NGE4 600 aa20.16■□□□□ 0.82
SEC23A-214ENST00000557437 U2SURPO15042 1029 aaKnown RBP20.16■□□□□ 0.82
SEC23A-214ENST00000557437 RNMTO43148 476 aaKnown RBP20.16■□□□□ 0.82
SEC23A-214ENST00000557437 RC3H1Q5TC82 1133 aaKnown RBP20.16■□□□□ 0.82
SEC23A-214ENST00000557437 RBM42Q9BTD8 480 aaKnown RBP20.16■□□□□ 0.82
SEC23A-214ENST00000557437 SLC52A2Q9HAB3 445 aa20.16■□□□□ 0.82
SEC23A-214ENST00000557437 GNPATO15228 680 aa20.15■□□□□ 0.82
SEC23A-214ENST00000557437 MSL1Q68DK7 614 aa20.15■□□□□ 0.82
SEC23A-214ENST00000557437 CFAP53Q96M91 514 aa20.15■□□□□ 0.82
SEC23A-214ENST00000557437 CNTNAP4Q9C0A0 1308 aa20.14■□□□□ 0.81
SEC23A-214ENST00000557437 PHF14O94880 888 aa20.14■□□□□ 0.81
SEC23A-214ENST00000557437 PTCD1O75127 700 aaKnown RBP20.13■□□□□ 0.81
SEC23A-214ENST00000557437 VIRMAQ69YN4 1812 aaKnown RBP20.13■□□□□ 0.81
SEC23A-214ENST00000557437 RSPH6AQ9H0K4 717 aa20.12■□□□□ 0.81
SEC23A-214ENST00000557437 TJP1Q07157 1748 aa20.12■□□□□ 0.81
SEC23A-214ENST00000557437 RTCBQ9Y3I0 505 aaKnown RBP20.11■□□□□ 0.81
SEC23A-214ENST00000557437 GOLGB1Q14789 3259 aaKnown RBP20.11■□□□□ 0.81
SEC23A-214ENST00000557437 MYH14Q7Z406 1995 aaKnown RBP20.1■□□□□ 0.81
SEC23A-214ENST00000557437 RPS6KA4O75676 772 aa20.1■□□□□ 0.81
SEC23A-214ENST00000557437 ADRA2BP18089 450 aa20.1■□□□□ 0.81
SEC23A-214ENST00000557437 NLGN2Q8NFZ4 835 aa20.1■□□□□ 0.81
SEC23A-214ENST00000557437 GAS2L2Q8NHY3 880 aa20.1■□□□□ 0.81
SEC23A-214ENST00000557437 NUDCQ9Y266 331 aa20.1■□□□□ 0.81
SEC23A-214ENST00000557437 KCPQ6ZWJ8 1503 aa20.09■□□□□ 0.81
SEC23A-214ENST00000557437 PHACTR3Q96KR7 559 aa20.09■□□□□ 0.81
SEC23A-214ENST00000557437 GNAT3A8MTJ3 354 aa20.08■□□□□ 0.81
SEC23A-214ENST00000557437 PRKAR2BP31323 418 aa20.08■□□□□ 0.81
SEC23A-214ENST00000557437 TRAPPC3LQ5T215 181 aa20.08■□□□□ 0.81
SEC23A-214ENST00000557437 KLHL34Q8N239 644 aa20.08■□□□□ 0.81
SEC23A-214ENST00000557437 IL17REQ8NFR9 667 aa20.08■□□□□ 0.81
SEC23A-214ENST00000557437 CD2APQ9Y5K6 639 aa20.08■□□□□ 0.81
SEC23A-214ENST00000557437 YY1P25490 414 aa20.07■□□□□ 0.8
SEC23A-214ENST00000557437 CRKLP46109 303 aaKnown RBP20.07■□□□□ 0.8
SEC23A-214ENST00000557437 SLC39A6Q13433 755 aa20.07■□□□□ 0.8
SEC23A-214ENST00000557437 ARHGEF1Q92888 912 aaKnown RBP20.07■□□□□ 0.8
SEC23A-214ENST00000557437 CEMIPQ8WUJ3 1361 aa20.07■□□□□ 0.8
SEC23A-214ENST00000557437 UBR2Q8IWV8 1755 aa20.06■□□□□ 0.8
SEC23A-214ENST00000557437 FCHSD2O94868 740 aa20.06■□□□□ 0.8
SEC23A-214ENST00000557437 U2AF1L5P0DN76 240 aaPredicted RBP20.05■□□□□ 0.8
SEC23A-214ENST00000557437 U2AF1Q01081 240 aaKnown RBP eCLIP20.05■□□□□ 0.8
SEC23A-214ENST00000557437 INTS5Q6P9B9 1019 aaKnown RBP20.05■□□□□ 0.8
SEC23A-214ENST00000557437 SIPA1L3O60292 1781 aaPredicted RBP20.05■□□□□ 0.8
SEC23A-214ENST00000557437 C4AP0C0L4 1744 aa20.05■□□□□ 0.8
SEC23A-214ENST00000557437 DNAJC10Q8IXB1 793 aa20.04■□□□□ 0.8
SEC23A-214ENST00000557437 VSIG10Q8N0Z9 540 aa20.04■□□□□ 0.8
SEC23A-214ENST00000557437 GYS1P13807 737 aa20.03■□□□□ 0.8
SEC23A-214ENST00000557437 NLGN1Q8N2Q7 840 aa20.03■□□□□ 0.8
SEC23A-214ENST00000557437 CYP19A1P11511 503 aaPredicted RBP20.02■□□□□ 0.8
SEC23A-214ENST00000557437 GPR162Q16538 588 aa20.02■□□□□ 0.8
SEC23A-214ENST00000557437 RFC4P35249 363 aa20.01■□□□□ 0.79
SEC23A-214ENST00000557437 TEFQ10587 303 aa20.01■□□□□ 0.79
SEC23A-214ENST00000557437 CCDC87Q9NVE4 849 aa20.01■□□□□ 0.79
SEC23A-214ENST00000557437 MMP10P09238 476 aa20■□□□□ 0.79
SEC23A-214ENST00000557437 ZNF790Q6PG37 636 aa20■□□□□ 0.79
SEC23A-214ENST00000557437 YBX3P16989 372 aaKnown RBP eCLIP19.99■□□□□ 0.797e-8■□□□□ 8.2
SEC23A-214ENST00000557437 SOS1Q07889 1333 aaPredicted RBP19.99■□□□□ 0.79
SEC23A-214ENST00000557437 USP42Q9H9J4 1324 aaKnown RBP19.99■□□□□ 0.79
SEC23A-214ENST00000557437 CHD4Q14839 1912 aa19.98■□□□□ 0.79
SEC23A-214ENST00000557437 RALBP1Q15311 655 aa19.98■□□□□ 0.79
SEC23A-214ENST00000557437 TTC5Q8N0Z6 440 aa19.98■□□□□ 0.79
SEC23A-214ENST00000557437 ZNF496Q96IT1 587 aaPredicted RBP19.98■□□□□ 0.79
SEC23A-214ENST00000557437 KIF13BQ9NQT8 1826 aa19.97■□□□□ 0.79
SEC23A-214ENST00000557437 HEG1Q9ULI3 1381 aa19.97■□□□□ 0.79
SEC23A-214ENST00000557437 HTATSF1O43719 755 aaKnown RBP19.97■□□□□ 0.79
SEC23A-214ENST00000557437 DDX10Q13206 875 aaKnown RBP19.97■□□□□ 0.79
SEC23A-214ENST00000557437 SRP68Q9UHB9 627 aaKnown RBP19.97■□□□□ 0.79
SEC23A-214ENST00000557437 PLEKHF1Q96S99 279 aa19.96■□□□□ 0.79
SEC23A-214ENST00000557437 ZBTB1Q9Y2K1 713 aa19.96■□□□□ 0.79
SEC23A-214ENST00000557437 FKBP8Q14318 412 aa19.95■□□□□ 0.78
SEC23A-214ENST00000557437 PELP1Q8IZL8 1130 aaKnown RBP19.95■□□□□ 0.78
SEC23A-214ENST00000557437 C10orf71Q711Q0 1435 aa19.94■□□□□ 0.78
SEC23A-214ENST00000557437 KIAA1551Q9HCM1 1747 aa19.94■□□□□ 0.78
SEC23A-214ENST00000557437 GRIN3BO60391 1043 aa19.94■□□□□ 0.78
SEC23A-214ENST00000557437 BTBD11A6QL63 1104 aa19.93■□□□□ 0.78
SEC23A-214ENST00000557437 STARD3NLO95772 234 aa19.93■□□□□ 0.78
SEC23A-214ENST00000557437 MCM10Q7L590 875 aa19.93■□□□□ 0.78
SEC23A-214ENST00000557437 RTF1Q92541 710 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms