RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 MTFR1LQ9H019 292 aa10.41□□□□□ -0.74
PSEN1-222ENST00000557356 PRKRIP1Q9H875 184 aaPredicted RBP10.41□□□□□ -0.74
PSEN1-222ENST00000557356 ANO8Q9HCE9 1232 aaPredicted RBP10.41□□□□□ -0.74
PSEN1-222ENST00000557356 DOT1LQ8TEK3 1739 aa10.41□□□□□ -0.74
PSEN1-222ENST00000557356 MAP3K5Q99683 1374 aa10.4□□□□□ -0.74
PSEN1-222ENST00000557356 MAPK8IP3Q9UPT6 1336 aa10.4□□□□□ -0.74
PSEN1-222ENST00000557356 WDR43Q15061 677 aaKnown RBP eCLIP10.4□□□□□ -0.74
PSEN1-222ENST00000557356 RC3H1Q5TC82 1133 aaKnown RBP10.4□□□□□ -0.74
PSEN1-222ENST00000557356 LGR6Q9HBX8 967 aa10.4□□□□□ -0.74
PSEN1-222ENST00000557356 PPP1R1BQ9UD71 204 aaPredicted RBP10.4□□□□□ -0.74
PSEN1-222ENST00000557356 NUP188Q5SRE5 1749 aa10.4□□□□□ -0.74
PSEN1-222ENST00000557356 ANP32CO43423 234 aa10.39□□□□□ -0.75
PSEN1-222ENST00000557356 TTC5Q8N0Z6 440 aa10.39□□□□□ -0.75
PSEN1-222ENST00000557356 PHACTR3Q96KR7 559 aa10.39□□□□□ -0.75
PSEN1-222ENST00000557356 TEX13AQ9BXU3 409 aaPredicted RBP10.39□□□□□ -0.75
PSEN1-222ENST00000557356 DCAF8L1A6NGE4 600 aa10.38□□□□□ -0.75
PSEN1-222ENST00000557356 PTCD1O75127 700 aaKnown RBP10.38□□□□□ -0.75
PSEN1-222ENST00000557356 SSFA2P28290 1259 aa10.38□□□□□ -0.75
PSEN1-222ENST00000557356 POLD1P28340 1107 aa10.38□□□□□ -0.75
PSEN1-222ENST00000557356 KCNQ4P56696 695 aa10.38□□□□□ -0.75
PSEN1-222ENST00000557356 VSIG10Q8N0Z9 540 aa10.38□□□□□ -0.75
PSEN1-222ENST00000557356 IL17REQ8NFR9 667 aa10.38□□□□□ -0.75
PSEN1-222ENST00000557356 KDM6AO15550 1401 aaPredicted RBP10.38□□□□□ -0.75
PSEN1-222ENST00000557356 LMOD3Q0VAK6 560 aa10.37□□□□□ -0.75
PSEN1-222ENST00000557356 ZNF827Q17R98 1081 aa10.37□□□□□ -0.75
PSEN1-222ENST00000557356 PNISRQ8TF01 805 aaKnown RBP10.37□□□□□ -0.75
PSEN1-222ENST00000557356 RTCBQ9Y3I0 505 aaKnown RBP10.37□□□□□ -0.75
PSEN1-222ENST00000557356 EP400Q96L91 3159 aa10.37□□□□□ -0.75
PSEN1-222ENST00000557356 PNPLA7Q6ZV29 1317 aa10.36□□□□□ -0.75
PSEN1-222ENST00000557356 ZBTB7AO95365 584 aa10.36□□□□□ -0.75
PSEN1-222ENST00000557356 STARD3NLO95772 234 aa10.36□□□□□ -0.75
PSEN1-222ENST00000557356 TAF7Q15545 349 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-222ENST00000557356 NFE2L2Q16236 605 aa10.36□□□□□ -0.75
PSEN1-222ENST00000557356 TRAPPC3LQ5T215 181 aa10.36□□□□□ -0.75
PSEN1-222ENST00000557356 ZNF790Q6PG37 636 aa10.36□□□□□ -0.75
PSEN1-222ENST00000557356 PLEKHF1Q96S99 279 aa10.36□□□□□ -0.75
PSEN1-222ENST00000557356 ATF5Q9Y2D1 282 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-222ENST00000557356 LY75O60449 1722 aa10.36□□□□□ -0.75
PSEN1-222ENST00000557356 CNTNAP4Q9C0A0 1308 aa10.35□□□□□ -0.75
PSEN1-222ENST00000557356 ITGB4P16144 1822 aa10.35□□□□□ -0.75
PSEN1-222ENST00000557356 BTBD11A6QL63 1104 aa10.35□□□□□ -0.75
PSEN1-222ENST00000557356 GNPATO15228 680 aa10.35□□□□□ -0.75
PSEN1-222ENST00000557356 RPS6KA4O75676 772 aa10.35□□□□□ -0.75
PSEN1-222ENST00000557356 RUNDC1Q96C34 613 aa10.35□□□□□ -0.75
PSEN1-222ENST00000557356 CEMIPQ8WUJ3 1361 aa10.35□□□□□ -0.75
PSEN1-222ENST00000557356 LRP5O75197 1615 aa10.34□□□□□ -0.75
PSEN1-222ENST00000557356 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.34□□□□□ -0.75
PSEN1-222ENST00000557356 RFC4P35249 363 aa10.34□□□□□ -0.75
PSEN1-222ENST00000557356 ITPK1Q13572 414 aa10.34□□□□□ -0.75
PSEN1-222ENST00000557356 NPM2Q86SE8 214 aaKnown RBP10.34□□□□□ -0.75
PSEN1-222ENST00000557356 COL23A1Q86Y22 540 aaPredicted RBP10.34□□□□□ -0.75
PSEN1-222ENST00000557356 NLGN1Q8N2Q7 840 aa10.34□□□□□ -0.75
PSEN1-222ENST00000557356 LINC00116Q8NCU8 138 aa10.34□□□□□ -0.75
PSEN1-222ENST00000557356 FMNL2Q96PY5 1086 aa10.34□□□□□ -0.75
PSEN1-222ENST00000557356 TOGARAM1Q9Y4F4 1720 aa10.33□□□□□ -0.76
PSEN1-222ENST00000557356 PTGER2P43116 358 aa10.33□□□□□ -0.76
PSEN1-222ENST00000557356 RIPK4P57078 832 aa10.33□□□□□ -0.76
PSEN1-222ENST00000557356 SLC39A6Q13433 755 aa10.33□□□□□ -0.76
PSEN1-222ENST00000557356 ARXQ96QS3 562 aa10.33□□□□□ -0.76
PSEN1-222ENST00000557356 PDGFDQ9GZP0 370 aaPredicted RBP10.33□□□□□ -0.76
PSEN1-222ENST00000557356 BABAM1Q9NWV8 329 aa10.33□□□□□ -0.76
PSEN1-222ENST00000557356 PAPPAQ13219 1627 aa10.33□□□□□ -0.76
PSEN1-222ENST00000557356 MRC1P22897 1456 aa10.32□□□□□ -0.76
PSEN1-222ENST00000557356 CRKLP46109 303 aaKnown RBP10.32□□□□□ -0.76
PSEN1-222ENST00000557356 MCM10Q7L590 875 aa10.32□□□□□ -0.76
PSEN1-222ENST00000557356 SLC4A9Q96Q91 983 aa10.32□□□□□ -0.76
PSEN1-222ENST00000557356 CCDC87Q9NVE4 849 aa10.32□□□□□ -0.76
PSEN1-222ENST00000557356 ADAMTS8Q9UP79 889 aa10.32□□□□□ -0.76
PSEN1-222ENST00000557356 SCN11AQ9UI33 1791 aa10.31□□□□□ -0.76
PSEN1-222ENST00000557356 ZNF831Q5JPB2 1677 aa10.31□□□□□ -0.76
PSEN1-222ENST00000557356 A0A087WZG4 1122 aa10.31□□□□□ -0.76
PSEN1-222ENST00000557356 PHF14O94880 888 aa10.31□□□□□ -0.76
PSEN1-222ENST00000557356 SNRPA1P09661 255 aaKnown RBP10.31□□□□□ -0.76
PSEN1-222ENST00000557356 CYP19A1P11511 503 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-222ENST00000557356 TMPOP42166 694 aaKnown RBP10.31□□□□□ -0.76
PSEN1-222ENST00000557356 DNAJC10Q8IXB1 793 aa10.31□□□□□ -0.76
PSEN1-222ENST00000557356 SGIP1Q9BQI5 828 aa10.31□□□□□ -0.76
PSEN1-222ENST00000557356 HEG1Q9ULI3 1381 aa10.3□□□□□ -0.76
PSEN1-222ENST00000557356 ZPR1O75312 459 aa10.3□□□□□ -0.76
PSEN1-222ENST00000557356 CALD1Q05682 793 aaKnown RBP10.3□□□□□ -0.76
PSEN1-222ENST00000557356 ARHGEF1Q92888 912 aaKnown RBP10.3□□□□□ -0.76
PSEN1-222ENST00000557356 ZNF496Q96IT1 587 aaPredicted RBP10.3□□□□□ -0.76
PSEN1-222ENST00000557356 C5P01031 1676 aa10.29□□□□□ -0.76
PSEN1-222ENST00000557356 ADAMTS7Q9UKP4 1686 aa10.29□□□□□ -0.76
PSEN1-222ENST00000557356 DCTN1Q14203 1278 aa10.29□□□□□ -0.76
PSEN1-222ENST00000557356 INTS5Q6P9B9 1019 aaKnown RBP10.29□□□□□ -0.76
PSEN1-222ENST00000557356 PPP4R3CPQ6ZMV5 832 aa10.29□□□□□ -0.76
PSEN1-222ENST00000557356 C4BP0C0L5 1744 aa10.29□□□□□ -0.76
PSEN1-222ENST00000557356 QSER1Q2KHR3 1735 aa10.29□□□□□ -0.76
PSEN1-222ENST00000557356 CASZ1Q86V15 1759 aa10.29□□□□□ -0.76
PSEN1-222ENST00000557356 SYT17Q9BSW7 474 aa10.28□□□□□ -0.76
PSEN1-222ENST00000557356 CHMP4AQ9BY43 222 aa10.28□□□□□ -0.76
PSEN1-222ENST00000557356 FHDC1Q9C0D6 1143 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-222ENST00000557356 MRS2Q9HD23 443 aa10.28□□□□□ -0.76
PSEN1-222ENST00000557356 CD2APQ9Y5K6 639 aa10.28□□□□□ -0.76
PSEN1-222ENST00000557356 CANXP27824 592 aaKnown RBP10.27□□□□□ -0.77
PSEN1-222ENST00000557356 IL6STP40189 918 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-222ENST00000557356 NEUROD2Q15784 382 aa10.27□□□□□ -0.77
PSEN1-222ENST00000557356 NCBP3Q53F19 620 aaKnown RBP10.27□□□□□ -0.77
PSEN1-222ENST00000557356 CCDC146Q8IYE0 955 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms