RNA–Protein interactions for RNA: ENST00000557168.1

TRAV30-201, Transcript of T cell receptor alpha variable 30, humanhuman

APPRIS P1 BASIC

Gene TRAV30, Length 337 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30-201ENST00000557168 KCPQ6ZWJ8 1503 aa6.74□□□□□ -1.33
TRAV30-201ENST00000557168 PXDNLA1KZ92 1463 aa6.73□□□□□ -1.33
TRAV30-201ENST00000557168 KIAA1551Q9HCM1 1747 aa6.73□□□□□ -1.33
TRAV30-201ENST00000557168 ROCK2O75116 1388 aaKnown RBP6.73□□□□□ -1.33
TRAV30-201ENST00000557168 RAPGEF4Q8WZA2 1011 aa6.73□□□□□ -1.33
TRAV30-201ENST00000557168 RNF181Q9P0P0 153 aa6.73□□□□□ -1.33
TRAV30-201ENST00000557168 ASAP1Q9ULH1 1129 aa6.73□□□□□ -1.33
TRAV30-201ENST00000557168 A0A1W2PP64 1363 aa6.72□□□□□ -1.33
TRAV30-201ENST00000557168 LOC102724428A0A0B4J2F2 783 aa6.72□□□□□ -1.33
TRAV30-201ENST00000557168 KCNA3P22001 575 aa6.72□□□□□ -1.33
TRAV30-201ENST00000557168 CHRNA5P30532 468 aa6.72□□□□□ -1.33
TRAV30-201ENST00000557168 ATP6V1AP38606 617 aa6.72□□□□□ -1.33
TRAV30-201ENST00000557168 SIK1P57059 783 aa6.72□□□□□ -1.33
TRAV30-201ENST00000557168 HSP90AB2PQ58FF8 381 aa6.72□□□□□ -1.33
TRAV30-201ENST00000557168 COG3Q96JB2 828 aa6.72□□□□□ -1.33
TRAV30-201ENST00000557168 GGNBP2Q9H3C7 697 aa6.72□□□□□ -1.33
TRAV30-201ENST00000557168 SBF1O95248 1867 aa6.71□□□□□ -1.34
TRAV30-201ENST00000557168 CCDC88AQ3V6T2 1871 aa6.71□□□□□ -1.34
TRAV30-201ENST00000557168 NEFLP07196 543 aa6.71□□□□□ -1.34
TRAV30-201ENST00000557168 RASSF7Q02833 373 aa6.71□□□□□ -1.34
TRAV30-201ENST00000557168 FSTL1Q12841 308 aa6.71□□□□□ -1.34
TRAV30-201ENST00000557168 CICQ96RK0 1608 aaPredicted RBP6.71□□□□□ -1.34
TRAV30-201ENST00000557168 MAP2P11137 1827 aaKnown RBP6.71□□□□□ -1.34
TRAV30-201ENST00000557168 EDC4Q6P2E9 1401 aaKnown RBP6.7□□□□□ -1.34
TRAV30-201ENST00000557168 SSFA2P28290 1259 aa6.7□□□□□ -1.34
TRAV30-201ENST00000557168 TGFB2P61812 414 aa6.7□□□□□ -1.34
TRAV30-201ENST00000557168 TMF1P82094 1093 aa6.7□□□□□ -1.34
TRAV30-201ENST00000557168 TRAPPC3LQ5T215 181 aa6.7□□□□□ -1.34
TRAV30-201ENST00000557168 ARHGEF1Q92888 912 aaKnown RBP6.7□□□□□ -1.34
TRAV30-201ENST00000557168 SMARCC1Q92922 1105 aaPredicted RBP6.7□□□□□ -1.34
TRAV30-201ENST00000557168 SLC4A9Q96Q91 983 aa6.7□□□□□ -1.34
TRAV30-201ENST00000557168 RBM42Q9BTD8 480 aaKnown RBP6.7□□□□□ -1.34
TRAV30-201ENST00000557168 TERF2IPQ9NYB0 399 aa6.7□□□□□ -1.34
TRAV30-201ENST00000557168 MKRN1Q9UHC7 482 aaKnown RBP6.7□□□□□ -1.34
TRAV30-201ENST00000557168 KIF13BQ9NQT8 1826 aa6.7□□□□□ -1.34
TRAV30-201ENST00000557168 KIF7Q2M1P5 1343 aa6.7□□□□□ -1.34
TRAV30-201ENST00000557168 PCDH11XQ9BZA7 1347 aa6.7□□□□□ -1.34
TRAV30-201ENST00000557168 PCDH11YQ9BZA8 1340 aa6.7□□□□□ -1.34
TRAV30-201ENST00000557168 BRCA1P38398 1863 aaKnown RBP6.69□□□□□ -1.34
TRAV30-201ENST00000557168 PPM1GO15355 546 aaPredicted RBP6.69□□□□□ -1.34
TRAV30-201ENST00000557168 GYS1P13807 737 aa6.69□□□□□ -1.34
TRAV30-201ENST00000557168 SMC1BQ8NDV3 1235 aa6.69□□□□□ -1.34
TRAV30-201ENST00000557168 CARD11Q9BXL7 1154 aa6.69□□□□□ -1.34
TRAV30-201ENST00000557168 ATG3Q9NT62 314 aa6.69□□□□□ -1.34
TRAV30-201ENST00000557168 CCDC87Q9NVE4 849 aa6.69□□□□□ -1.34
TRAV30-201ENST00000557168 PIM2Q9P1W9 311 aa6.69□□□□□ -1.34
TRAV30-201ENST00000557168 SRP68Q9UHB9 627 aaKnown RBP6.69□□□□□ -1.34
TRAV30-201ENST00000557168 PARP3Q9Y6F1 533 aa6.69□□□□□ -1.34
TRAV30-201ENST00000557168 PKD1L3Q7Z443 1732 aa6.69□□□□□ -1.34
TRAV30-201ENST00000557168 ZBED9Q6R2W3 1325 aa6.69□□□□□ -1.34
TRAV30-201ENST00000557168 KDM2BQ8NHM5 1336 aa6.69□□□□□ -1.34
TRAV30-201ENST00000557168 MYH14Q7Z406 1995 aaKnown RBP6.68□□□□□ -1.34
TRAV30-201ENST00000557168 FYB1O15117 783 aa6.68□□□□□ -1.34
TRAV30-201ENST00000557168 FOXN1O15353 648 aa6.68□□□□□ -1.34
TRAV30-201ENST00000557168 HNRNPUQ00839 825 aaKnown RBP eCLIP6.68□□□□□ -1.34
TRAV30-201ENST00000557168 CCDC184Q52MB2 194 aa6.68□□□□□ -1.34
TRAV30-201ENST00000557168 DALRD3Q5D0E6 543 aaKnown RBP6.68□□□□□ -1.34
TRAV30-201ENST00000557168 TMOD3Q9NYL9 352 aa6.68□□□□□ -1.34
TRAV30-201ENST00000557168 ZNF219Q9P2Y4 722 aaPredicted RBP6.68□□□□□ -1.34
TRAV30-201ENST00000557168 RTCBQ9Y3I0 505 aaKnown RBP6.68□□□□□ -1.34
TRAV30-201ENST00000557168 EMILIN1Q9Y6C2 1016 aa6.68□□□□□ -1.34
TRAV30-201ENST00000557168 ARFGEF1Q9Y6D6 1849 aa6.68□□□□□ -1.34
TRAV30-201ENST00000557168 RFC4P35249 363 aa6.67□□□□□ -1.34
TRAV30-201ENST00000557168 DDR1Q08345 913 aa6.67□□□□□ -1.34
TRAV30-201ENST00000557168 NLGN1Q8N2Q7 840 aa6.67□□□□□ -1.34
TRAV30-201ENST00000557168 DCAF5Q96JK2 942 aa6.67□□□□□ -1.34
TRAV30-201ENST00000557168 C4AP0C0L4 1744 aa6.67□□□□□ -1.34
TRAV30-201ENST00000557168 C10orf71Q711Q0 1435 aa6.67□□□□□ -1.34
TRAV30-201ENST00000557168 POTECB2RU33 542 aa6.66□□□□□ -1.34
TRAV30-201ENST00000557168 SLC34A2O95436 690 aa6.66□□□□□ -1.34
TRAV30-201ENST00000557168 POTEIP0CG38 1075 aa6.66□□□□□ -1.34
TRAV30-201ENST00000557168 POTEJP0CG39 1038 aa6.66□□□□□ -1.34
TRAV30-201ENST00000557168 FAM161AQ3B820 660 aa6.66□□□□□ -1.34
TRAV30-201ENST00000557168 CGNL1Q0VF96 1302 aa6.66□□□□□ -1.34
TRAV30-201ENST00000557168 RNF123Q5XPI4 1314 aa6.66□□□□□ -1.34
TRAV30-201ENST00000557168 PTCD1O75127 700 aaKnown RBP6.65□□□□□ -1.34
TRAV30-201ENST00000557168 RPS6KA4O75676 772 aa6.65□□□□□ -1.34
TRAV30-201ENST00000557168 VEGFAP15692 232 aaPredicted RBP6.65□□□□□ -1.34
TRAV30-201ENST00000557168 PHKG2P15735 406 aa6.65□□□□□ -1.34
TRAV30-201ENST00000557168 NKX1-1Q15270 411 aaPredicted RBP6.65□□□□□ -1.34
TRAV30-201ENST00000557168 EYA1Q99502 592 aa6.65□□□□□ -1.34
TRAV30-201ENST00000557168 PPP4R2Q9NY27 417 aa6.65□□□□□ -1.34
TRAV30-201ENST00000557168 SPG7Q9UQ90 795 aa6.65□□□□□ -1.34
TRAV30-201ENST00000557168 RBM19Q9Y4C8 960 aaKnown RBP6.65□□□□□ -1.34
TRAV30-201ENST00000557168 PLEKHG2Q9H7P9 1386 aa6.65□□□□□ -1.35
TRAV30-201ENST00000557168 SMG6Q86US8 1419 aaKnown RBP6.65□□□□□ -1.35
TRAV30-201ENST00000557168 NSD3Q9BZ95 1437 aa6.65□□□□□ -1.35
TRAV30-201ENST00000557168 TNRC6CQ9HCJ0 1690 aaKnown RBP6.65□□□□□ -1.35
TRAV30-201ENST00000557168 ST20-MTHFSA0A0A6YYL1 179 aa6.64□□□□□ -1.35
TRAV30-201ENST00000557168 GLTPD2A6NH11 291 aa6.64□□□□□ -1.35
TRAV30-201ENST00000557168 LBX1P52954 281 aa6.64□□□□□ -1.35
TRAV30-201ENST00000557168 CCDC24Q8N4L8 307 aa6.64□□□□□ -1.35
TRAV30-201ENST00000557168 MRS2Q9HD23 443 aa6.64□□□□□ -1.35
TRAV30-201ENST00000557168 INSRP06213 1382 aa6.64□□□□□ -1.35
TRAV30-201ENST00000557168 RTL1A6NKG5 1358 aa6.63□□□□□ -1.35
TRAV30-201ENST00000557168 TNNT2P45379 298 aaPredicted RBP6.63□□□□□ -1.35
TRAV30-201ENST00000557168 CRKLP46109 303 aaKnown RBP6.63□□□□□ -1.35
TRAV30-201ENST00000557168 RALBP1Q15311 655 aa6.63□□□□□ -1.35
TRAV30-201ENST00000557168 USPL1Q5W0Q7 1092 aa6.63□□□□□ -1.35
TRAV30-201ENST00000557168 IFNL2Q8IZJ0 200 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms