RNA–Protein interactions for RNA: ENST00000557058.1

ITGA7-217, Transcript of integrin subunit alpha 7, humanhuman

TSL 5

Gene ITGA7, Length 1,040 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-217ENST00000557058 ATP10DQ9P241 1426 aa19.66■□□□□ 0.74
ITGA7-217ENST00000557058 HOXC9P31274 260 aa19.65■□□□□ 0.74
ITGA7-217ENST00000557058 AMPHP49418 695 aa19.65■□□□□ 0.74
ITGA7-217ENST00000557058 RCAN3Q9UKA8 241 aa19.65■□□□□ 0.74
ITGA7-217ENST00000557058 MAPK8IP3Q9UPT6 1336 aa19.65■□□□□ 0.74
ITGA7-217ENST00000557058 SLC27A3Q5K4L6 730 aa19.64■□□□□ 0.73
ITGA7-217ENST00000557058 NLGN2Q8NFZ4 835 aa19.64■□□□□ 0.73
ITGA7-217ENST00000557058 PHACTR3Q96KR7 559 aa19.64■□□□□ 0.73
ITGA7-217ENST00000557058 IL16Q14005 1332 aa19.64■□□□□ 0.73
ITGA7-217ENST00000557058 HMOX1P09601 288 aa19.63■□□□□ 0.73
ITGA7-217ENST00000557058 NFE2L2Q16236 605 aa19.63■□□□□ 0.73
ITGA7-217ENST00000557058 IGSF1Q8N6C5 1336 aa19.62■□□□□ 0.73
ITGA7-217ENST00000557058 YBX3P16989 372 aaKnown RBP eCLIP19.62■□□□□ 0.73
ITGA7-217ENST00000557058 NEUROD2Q15784 382 aa19.62■□□□□ 0.73
ITGA7-217ENST00000557058 ZNF526Q8TF50 670 aaPredicted RBP19.62■□□□□ 0.73
ITGA7-217ENST00000557058 KDRP35968 1356 aa19.61■□□□□ 0.73
ITGA7-217ENST00000557058 RIPK4P57078 832 aa19.61■□□□□ 0.73
ITGA7-217ENST00000557058 SLC16A10Q8TF71 515 aa19.61■□□□□ 0.73
ITGA7-217ENST00000557058 LRRC4BQ9NT99 713 aa19.61■□□□□ 0.73
ITGA7-217ENST00000557058 SULT6B1Q6IMI4 303 aa19.6■□□□□ 0.73
ITGA7-217ENST00000557058 AKT1S1Q96B36 256 aa19.6■□□□□ 0.73
ITGA7-217ENST00000557058 EYA1Q99502 592 aa19.6■□□□□ 0.73
ITGA7-217ENST00000557058 GPBP1L1Q9HC44 474 aaPredicted RBP19.6■□□□□ 0.73
ITGA7-217ENST00000557058 QSER1Q2KHR3 1735 aa19.59■□□□□ 0.73
ITGA7-217ENST00000557058 NEFMP07197 916 aa19.59■□□□□ 0.73
ITGA7-217ENST00000557058 ZNF827Q17R98 1081 aa19.59■□□□□ 0.73
ITGA7-217ENST00000557058 AEBP1Q8IUX7 1158 aa19.58■□□□□ 0.72
ITGA7-217ENST00000557058 DDX54Q8TDD1 881 aaKnown RBP19.58■□□□□ 0.72
ITGA7-217ENST00000557058 KAT6BQ8WYB5 2073 aa19.58■□□□□ 0.72
ITGA7-217ENST00000557058 RRP1P56182 461 aaKnown RBP19.57■□□□□ 0.72
ITGA7-217ENST00000557058 COL13A1Q5TAT6 717 aaPredicted RBP19.57■□□□□ 0.72
ITGA7-217ENST00000557058 LTV1Q96GA3 475 aaPredicted RBP19.56■□□□□ 0.72
ITGA7-217ENST00000557058 MYH16Q9H6N6 1097 aa19.56■□□□□ 0.72
ITGA7-217ENST00000557058 COL24A1Q17RW2 1714 aa19.56■□□□□ 0.72
ITGA7-217ENST00000557058 ZCRB1Q8TBF4 217 aaKnown RBP19.55■□□□□ 0.72
ITGA7-217ENST00000557058 PCNTO95613 3336 aa19.55■□□□□ 0.72
ITGA7-217ENST00000557058 PRIM1P49642 420 aaKnown RBP19.53■□□□□ 0.72
ITGA7-217ENST00000557058 LY75O60449 1722 aa19.53■□□□□ 0.72
ITGA7-217ENST00000557058 PNPLA7Q6ZV29 1317 aa19.52■□□□□ 0.72
ITGA7-217ENST00000557058 GRIN3BO60391 1043 aa19.52■□□□□ 0.72
ITGA7-217ENST00000557058 ZNF853P0CG23 659 aa19.52■□□□□ 0.72
ITGA7-217ENST00000557058 LMOD3Q0VAK6 560 aa19.52■□□□□ 0.72
ITGA7-217ENST00000557058 NCAPD2Q15021 1401 aa19.51■□□□□ 0.71
ITGA7-217ENST00000557058 MEGF6O75095 1541 aa19.51■□□□□ 0.71
ITGA7-217ENST00000557058 CT47B1P0C2W7 299 aaPredicted RBP19.51■□□□□ 0.71
ITGA7-217ENST00000557058 HMGB2P26583 209 aaKnown RBP19.51■□□□□ 0.71
ITGA7-217ENST00000557058 POLD1P28340 1107 aa19.51■□□□□ 0.71
ITGA7-217ENST00000557058 CALD1Q05682 793 aaKnown RBP19.51■□□□□ 0.71
ITGA7-217ENST00000557058 DNAJC5GQ8N7S2 189 aa19.51■□□□□ 0.71
ITGA7-217ENST00000557058 DOT1LQ8TEK3 1739 aa19.51■□□□□ 0.71
ITGA7-217ENST00000557058 RGPD2P0DJD1 1756 aa19.5■□□□□ 0.71
ITGA7-217ENST00000557058 IRX6P78412 446 aaPredicted RBP19.5■□□□□ 0.71
ITGA7-217ENST00000557058 NBPF6Q5VWK0 638 aa19.5■□□□□ 0.71
ITGA7-217ENST00000557058 SYTL4Q96C24 671 aaPredicted RBP19.5■□□□□ 0.71
ITGA7-217ENST00000557058 NBPF4Q96M43 638 aa19.5■□□□□ 0.71
ITGA7-217ENST00000557058 TFCP2L1Q9NZI6 479 aa19.49■□□□□ 0.71
ITGA7-217ENST00000557058 HTATSF1O43719 755 aaKnown RBP19.48■□□□□ 0.71
ITGA7-217ENST00000557058 PPP4R2Q9NY27 417 aa19.48■□□□□ 0.71
ITGA7-217ENST00000557058 FANCIQ9NVI1 1328 aa19.48■□□□□ 0.71
ITGA7-217ENST00000557058 MTHFSDQ2M296 383 aaKnown RBP19.47■□□□□ 0.71
ITGA7-217ENST00000557058 RAPGEF4Q8WZA2 1011 aa19.47■□□□□ 0.71
ITGA7-217ENST00000557058 IFT57Q9NWB7 429 aa19.47■□□□□ 0.71
ITGA7-217ENST00000557058 ADCY9O60503 1353 aa19.46■□□□□ 0.71
ITGA7-217ENST00000557058 GAS2L2Q8NHY3 880 aa19.46■□□□□ 0.71
ITGA7-217ENST00000557058 CCNL1Q9UK58 526 aaPredicted RBP19.46■□□□□ 0.71
ITGA7-217ENST00000557058 TUBGCP6Q96RT7 1819 aa19.46■□□□□ 0.71
ITGA7-217ENST00000557058 TATP17735 454 aaPredicted RBP19.45■□□□□ 0.7
ITGA7-217ENST00000557058 APLP1P51693 650 aa19.45■□□□□ 0.7
ITGA7-217ENST00000557058 PRELPP51888 382 aa19.45■□□□□ 0.7
ITGA7-217ENST00000557058 RARSP54136 660 aaKnown RBP19.45■□□□□ 0.7
ITGA7-217ENST00000557058 GNAI1P63096 354 aa19.45■□□□□ 0.7
ITGA7-217ENST00000557058 TNS4Q8IZW8 715 aa19.44■□□□□ 0.7
ITGA7-217ENST00000557058 CFAP44Q96MT7 982 aa19.44■□□□□ 0.7
ITGA7-217ENST00000557058 PCDH11XQ9BZA7 1347 aa19.44■□□□□ 0.7
ITGA7-217ENST00000557058 PCDH11YQ9BZA8 1340 aa19.44■□□□□ 0.7
ITGA7-217ENST00000557058 DLG5Q8TDM6 1919 aa19.43■□□□□ 0.7
ITGA7-217ENST00000557058 KIF3CO14782 793 aa19.43■□□□□ 0.7
ITGA7-217ENST00000557058 KCNQ4P56696 695 aa19.43■□□□□ 0.7
ITGA7-217ENST00000557058 EXOSC9Q06265 439 aaKnown RBP19.43■□□□□ 0.7
ITGA7-217ENST00000557058 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.43■□□□□ 0.7
ITGA7-217ENST00000557058 TSR2Q969E8 191 aaKnown RBP19.42■□□□□ 0.7
ITGA7-217ENST00000557058 BCAR3O75815 825 aa19.41■□□□□ 0.7
ITGA7-217ENST00000557058 USHBP1Q8N6Y0 703 aa19.41■□□□□ 0.7
ITGA7-217ENST00000557058 THUMPD2Q9BTF0 503 aaKnown RBP19.41■□□□□ 0.7
ITGA7-217ENST00000557058 CHL1O00533 1208 aa19.4■□□□□ 0.7
ITGA7-217ENST00000557058 PLIN1O60240 522 aa19.4■□□□□ 0.7
ITGA7-217ENST00000557058 COL23A1Q86Y22 540 aaPredicted RBP19.4■□□□□ 0.7
ITGA7-217ENST00000557058 FLAD1Q8NFF5 587 aa19.4■□□□□ 0.7
ITGA7-217ENST00000557058 ZNF428Q96B54 188 aa19.4■□□□□ 0.7
ITGA7-217ENST00000557058 HTRA3P83110 453 aa19.38■□□□□ 0.69
ITGA7-217ENST00000557058 DCTN1Q14203 1278 aa19.38■□□□□ 0.69
ITGA7-217ENST00000557058 PLEKHG2Q9H7P9 1386 aa19.38■□□□□ 0.69
ITGA7-217ENST00000557058 C5P01031 1676 aa19.37■□□□□ 0.69
ITGA7-217ENST00000557058 PALLDQ8WX93 1383 aa19.37■□□□□ 0.69
ITGA7-217ENST00000557058 GNAT3A8MTJ3 354 aa19.37■□□□□ 0.69
ITGA7-217ENST00000557058 CYP27B1O15528 508 aa19.37■□□□□ 0.69
ITGA7-217ENST00000557058 SLC34A2O95436 690 aa19.37■□□□□ 0.69
ITGA7-217ENST00000557058 BRPF1P55201 1214 aaPredicted RBP19.37■□□□□ 0.69
ITGA7-217ENST00000557058 PDE3AQ14432 1141 aa19.37■□□□□ 0.69
ITGA7-217ENST00000557058 EXOC6Q8TAG9 804 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms