RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 DALRD3Q5D0E6 543 aaKnown RBP17.94■□□□□ 0.46
PSEN1-220ENST00000557037 HDGFL2Q7Z4V5 671 aaPredicted RBP17.94■□□□□ 0.46
PSEN1-220ENST00000557037 PIM2Q9P1W9 311 aa17.94■□□□□ 0.46
PSEN1-220ENST00000557037 PCDH11XQ9BZA7 1347 aa17.94■□□□□ 0.46
PSEN1-220ENST00000557037 PCDH11YQ9BZA8 1340 aa17.94■□□□□ 0.46
PSEN1-220ENST00000557037 VEGFAP15692 232 aaPredicted RBP17.93■□□□□ 0.46
PSEN1-220ENST00000557037 NLGN1Q8N2Q7 840 aa17.93■□□□□ 0.46
PSEN1-220ENST00000557037 PRDM10Q9NQV6 1147 aa17.93■□□□□ 0.46
PSEN1-220ENST00000557037 CGNL1Q0VF96 1302 aa17.93■□□□□ 0.46
PSEN1-220ENST00000557037 ITGB4P16144 1822 aa17.93■□□□□ 0.46
PSEN1-220ENST00000557037 CYP27B1O15528 508 aa17.92■□□□□ 0.46
PSEN1-220ENST00000557037 SLC12A5Q9H2X9 1139 aa17.92■□□□□ 0.46
PSEN1-220ENST00000557037 SBF1O95248 1867 aa17.92■□□□□ 0.46
PSEN1-220ENST00000557037 EDC4Q6P2E9 1401 aaKnown RBP17.91■□□□□ 0.46
PSEN1-220ENST00000557037 PARP3Q9Y6F1 533 aa17.91■□□□□ 0.46
PSEN1-220ENST00000557037 ATP6V1AP38606 617 aa17.9■□□□□ 0.46
PSEN1-220ENST00000557037 RASSF7Q02833 373 aa17.9■□□□□ 0.46
PSEN1-220ENST00000557037 TRAPPC3LQ5T215 181 aa17.9■□□□□ 0.46
PSEN1-220ENST00000557037 ABHD8Q96I13 439 aa17.9■□□□□ 0.46
PSEN1-220ENST00000557037 MAP2P11137 1827 aaKnown RBP17.9■□□□□ 0.46
PSEN1-220ENST00000557037 C4AP0C0L4 1744 aa17.89■□□□□ 0.46
PSEN1-220ENST00000557037 CTCFP49711 727 aaPredicted RBP17.89■□□□□ 0.45
PSEN1-220ENST00000557037 GLTPD2A6NH11 291 aa17.88■□□□□ 0.45
PSEN1-220ENST00000557037 CHRNA5P30532 468 aa17.88■□□□□ 0.45
PSEN1-220ENST00000557037 AIDAQ96BJ3 306 aa17.88■□□□□ 0.45
PSEN1-220ENST00000557037 ASAP1Q9ULH1 1129 aa17.88■□□□□ 0.45
PSEN1-220ENST00000557037 LBX1P52954 281 aa17.87■□□□□ 0.45
PSEN1-220ENST00000557037 RTCBQ9Y3I0 505 aaKnown RBP17.87■□□□□ 0.45
PSEN1-220ENST00000557037 GYS1P13807 737 aa17.86■□□□□ 0.45
PSEN1-220ENST00000557037 MLLT1Q03111 559 aaPredicted RBP17.86■□□□□ 0.45
PSEN1-220ENST00000557037 ARHGEF1Q92888 912 aaKnown RBP17.86■□□□□ 0.45
PSEN1-220ENST00000557037 COG3Q96JB2 828 aa17.86■□□□□ 0.45
PSEN1-220ENST00000557037 CREBZFQ9NS37 354 aa17.86■□□□□ 0.45
PSEN1-220ENST00000557037 A0A1W2PP64 1363 aa17.86■□□□□ 0.45
PSEN1-220ENST00000557037 RRS1Q15050 365 aaKnown RBP17.85■□□□□ 0.45
PSEN1-220ENST00000557037 TERF2IPQ9NYB0 399 aa17.85■□□□□ 0.45
PSEN1-220ENST00000557037 POTECB2RU33 542 aa17.84■□□□□ 0.45
PSEN1-220ENST00000557037 TMOD3Q9NYL9 352 aa17.84■□□□□ 0.45
PSEN1-220ENST00000557037 ROCK2O75116 1388 aaKnown RBP17.83■□□□□ 0.45
PSEN1-220ENST00000557037 ZC3H4Q9UPT8 1303 aaKnown RBP17.83■□□□□ 0.44
PSEN1-220ENST00000557037 RFC4P35249 363 aa17.83■□□□□ 0.44
PSEN1-220ENST00000557037 CCDC85CA6NKD9 419 aa17.82■□□□□ 0.44
PSEN1-220ENST00000557037 LMNB1P20700 586 aa17.82■□□□□ 0.44
PSEN1-220ENST00000557037 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
PSEN1-220ENST00000557037 CNTNAP1P78357 1384 aa17.81■□□□□ 0.44
PSEN1-220ENST00000557037 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
PSEN1-220ENST00000557037 RTL1A6NKG5 1358 aa17.8■□□□□ 0.44
PSEN1-220ENST00000557037 VEGFBP49765 207 aa17.8■□□□□ 0.44
PSEN1-220ENST00000557037 DDR1Q08345 913 aa17.8■□□□□ 0.44
PSEN1-220ENST00000557037 L3MBTL2Q969R5 705 aa17.8■□□□□ 0.44
PSEN1-220ENST00000557037 ATG3Q9NT62 314 aa17.8■□□□□ 0.44
PSEN1-220ENST00000557037 ADRA2BP18089 450 aa17.79■□□□□ 0.44
PSEN1-220ENST00000557037 NKX1-1Q15270 411 aaPredicted RBP17.79■□□□□ 0.44
PSEN1-220ENST00000557037 CHADLQ6NUI6 762 aa17.79■□□□□ 0.44
PSEN1-220ENST00000557037 PDE4DIPQ5VU43 2346 aa17.78■□□□□ 0.44
PSEN1-220ENST00000557037 HSP90AB2PQ58FF8 381 aa17.78■□□□□ 0.44
PSEN1-220ENST00000557037 SLC4A9Q96Q91 983 aa17.78■□□□□ 0.44
PSEN1-220ENST00000557037 WBP1LQ9NX94 342 aa17.78■□□□□ 0.44
PSEN1-220ENST00000557037 SRP68Q9UHB9 627 aaKnown RBP17.78■□□□□ 0.44
PSEN1-220ENST00000557037 POTEIP0CG38 1075 aa17.77■□□□□ 0.44
PSEN1-220ENST00000557037 POTEJP0CG39 1038 aa17.77■□□□□ 0.44
PSEN1-220ENST00000557037 HSPA8P11142 646 aaKnown RBP17.77■□□□□ 0.44
PSEN1-220ENST00000557037 FKBP8Q14318 412 aa17.77■□□□□ 0.44
PSEN1-220ENST00000557037 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
PSEN1-220ENST00000557037 RPS6KA4O75676 772 aa17.76■□□□□ 0.43
PSEN1-220ENST00000557037 CCDC88AQ3V6T2 1871 aa17.75■□□□□ 0.43
PSEN1-220ENST00000557037 TIAM2Q8IVF5 1701 aa17.75■□□□□ 0.43
PSEN1-220ENST00000557037 RGS19P49795 217 aa17.75■□□□□ 0.43
PSEN1-220ENST00000557037 RC3H1Q5TC82 1133 aaKnown RBP17.75■□□□□ 0.43
PSEN1-220ENST00000557037 SPG7Q9UQ90 795 aa17.74■□□□□ 0.43
PSEN1-220ENST00000557037 KDRP35968 1356 aa17.74■□□□□ 0.43
PSEN1-220ENST00000557037 DPY19L2Q6NUT2 758 aa17.73■□□□□ 0.43
PSEN1-220ENST00000557037 CNTNAP4Q9C0A0 1308 aa17.72■□□□□ 0.43
PSEN1-220ENST00000557037 INSRP06213 1382 aa17.72■□□□□ 0.43
PSEN1-220ENST00000557037 CFAP44Q96MT7 982 aa17.72■□□□□ 0.43
PSEN1-220ENST00000557037 NFKBIEO00221 500 aa17.71■□□□□ 0.43
PSEN1-220ENST00000557037 GGNBP2Q9H3C7 697 aa17.71■□□□□ 0.43
PSEN1-220ENST00000557037 MYH14Q7Z406 1995 aaKnown RBP17.71■□□□□ 0.43
PSEN1-220ENST00000557037 POLRMTO00411 1230 aaKnown RBP17.7■□□□□ 0.42
PSEN1-220ENST00000557037 PASKQ96RG2 1323 aa17.7■□□□□ 0.42
PSEN1-220ENST00000557037 TMEM88BA6NKF7 163 aa17.69■□□□□ 0.42
PSEN1-220ENST00000557037 VIRMAQ69YN4 1812 aaKnown RBP17.69■□□□□ 0.42
PSEN1-220ENST00000557037 USP42Q9H9J4 1324 aaKnown RBP17.69■□□□□ 0.42
PSEN1-220ENST00000557037 PHKG2P15735 406 aa17.68■□□□□ 0.42
PSEN1-220ENST00000557037 TTLL6Q8N841 843 aa17.68■□□□□ 0.42
PSEN1-220ENST00000557037 FLT4P35916 1363 aa17.67■□□□□ 0.42
PSEN1-220ENST00000557037 COL5A3P25940 1745 aaPredicted RBP17.67■□□□□ 0.42
PSEN1-220ENST00000557037 TM4SF1P30408 202 aa17.67■□□□□ 0.42
PSEN1-220ENST00000557037 ERFEQ4G0M1 354 aa17.67■□□□□ 0.42
PSEN1-220ENST00000557037 IFNL2Q8IZJ0 200 aa17.67■□□□□ 0.42
PSEN1-220ENST00000557037 DDNO94850 711 aaPredicted RBP17.66■□□□□ 0.42
PSEN1-220ENST00000557037 ZNF219Q9P2Y4 722 aaPredicted RBP17.66■□□□□ 0.42
PSEN1-220ENST00000557037 FYB1O15117 783 aa17.65■□□□□ 0.42
PSEN1-220ENST00000557037 CRKLP46109 303 aaKnown RBP17.65■□□□□ 0.42
PSEN1-220ENST00000557037 C2CD5Q86YS7 1000 aa17.65■□□□□ 0.42
PSEN1-220ENST00000557037 TNRC18O15417 2968 aaPredicted RBP17.64■□□□□ 0.41
PSEN1-220ENST00000557037 DEFB115Q30KQ5 88 aa17.64■□□□□ 0.41
PSEN1-220ENST00000557037 LDHDQ86WU2 507 aa17.64■□□□□ 0.41
PSEN1-220ENST00000557037 PTCD1O75127 700 aaKnown RBP17.63■□□□□ 0.41
PSEN1-220ENST00000557037 ITGBL1O95965 494 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms