RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 PRDM10Q9NQV6 1147 aa8.56□□□□□ -1.04
ATXN3-245ENST00000556958 IGSF1Q8N6C5 1336 aa8.55□□□□□ -1.04
ATXN3-245ENST00000556958 NLRP6P59044 892 aa8.55□□□□□ -1.04
ATXN3-245ENST00000556958 MSL1Q68DK7 614 aa8.55□□□□□ -1.04
ATXN3-245ENST00000556958 COL23A1Q86Y22 540 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-245ENST00000556958 ALS2Q96Q42 1657 aa8.55□□□□□ -1.04
ATXN3-245ENST00000556958 KDM2BQ8NHM5 1336 aa8.54□□□□□ -1.04
ATXN3-245ENST00000556958 PEAK1Q9H792 1746 aa8.54□□□□□ -1.04
ATXN3-245ENST00000556958 CCDC7Q96M83 1385 aa8.54□□□□□ -1.04
ATXN3-245ENST00000556958 AXIN2Q9Y2T1 843 aa8.54□□□□□ -1.04
ATXN3-245ENST00000556958 TRPM3Q9HCF6 1732 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-245ENST00000556958 POLR3AO14802 1390 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-245ENST00000556958 LSM11P83369 360 aaKnown RBP eCLIP8.53□□□□□ -1.04
ATXN3-245ENST00000556958 ARHGAP27Q6ZUM4 889 aa8.53□□□□□ -1.04
ATXN3-245ENST00000556958 PARP4Q9UKK3 1724 aaKnown RBP8.53□□□□□ -1.04
ATXN3-245ENST00000556958 TULP4Q9NRJ4 1543 aa8.53□□□□□ -1.04
ATXN3-245ENST00000556958 LOC105371045A0A1W2PR82 267 aa8.52□□□□□ -1.05
ATXN3-245ENST00000556958 KCNH5Q8NCM2 988 aa8.52□□□□□ -1.05
ATXN3-245ENST00000556958 CDK19Q9BWU1 502 aa8.52□□□□□ -1.05
ATXN3-245ENST00000556958 CTCFP49711 727 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-245ENST00000556958 KCNQ4P56696 695 aa8.51□□□□□ -1.05
ATXN3-245ENST00000556958 AIDAQ96BJ3 306 aa8.51□□□□□ -1.05
ATXN3-245ENST00000556958 RRAGCQ9HB90 399 aa8.51□□□□□ -1.05
ATXN3-245ENST00000556958 CCNL1Q9UK58 526 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-245ENST00000556958 KIF1BO60333 1816 aa8.51□□□□□ -1.05
ATXN3-245ENST00000556958 SPATA31E1Q6ZUB1 1445 aa8.51□□□□□ -1.05
ATXN3-245ENST00000556958 IL2RBP14784 551 aa8.5□□□□□ -1.05
ATXN3-245ENST00000556958 RGS19P49795 217 aa8.5□□□□□ -1.05
ATXN3-245ENST00000556958 ARHGEF25Q86VW2 580 aa8.5□□□□□ -1.05
ATXN3-245ENST00000556958 SYTL4Q96C24 671 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-245ENST00000556958 ABHD8Q96I13 439 aa8.5□□□□□ -1.05
ATXN3-245ENST00000556958 KNDC1Q76NI1 1749 aa8.49□□□□□ -1.05
ATXN3-245ENST00000556958 TNS2Q63HR2 1409 aa8.49□□□□□ -1.05
ATXN3-245ENST00000556958 ARSIQ5FYB1 569 aa8.49□□□□□ -1.05
ATXN3-245ENST00000556958 C9orf131Q5VYM1 1079 aa8.49□□□□□ -1.05
ATXN3-245ENST00000556958 NLRP2Q9NX02 1062 aa8.49□□□□□ -1.05
ATXN3-245ENST00000556958 BCS1LQ9Y276 419 aa8.49□□□□□ -1.05
ATXN3-245ENST00000556958 PHRF1Q9P1Y6 1649 aaKnown RBP8.49□□□□□ -1.05
ATXN3-245ENST00000556958 ZNF316A6NFI3 1004 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-245ENST00000556958 FOXN1O15353 648 aa8.48□□□□□ -1.05
ATXN3-245ENST00000556958 PRIM1P49642 420 aaKnown RBP8.48□□□□□ -1.05
ATXN3-245ENST00000556958 TGFB2P61812 414 aa8.48□□□□□ -1.05
ATXN3-245ENST00000556958 MICALL2Q8IY33 904 aa8.48□□□□□ -1.05
ATXN3-245ENST00000556958 DDX54Q8TDD1 881 aaKnown RBP8.48□□□□□ -1.05
ATXN3-245ENST00000556958 CIZ1Q9ULV3 898 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-245ENST00000556958 LMO7Q8WWI1 1683 aa8.48□□□□□ -1.05
ATXN3-245ENST00000556958 PLEKHG2Q9H7P9 1386 aa8.48□□□□□ -1.05
ATXN3-245ENST00000556958 PCNTO95613 3336 aa8.47□□□□□ -1.05
ATXN3-245ENST00000556958 LRRC37A3O60309 1634 aa8.47□□□□□ -1.05
ATXN3-245ENST00000556958 PPIP5K1Q6PFW1 1433 aa8.47□□□□□ -1.05
ATXN3-245ENST00000556958 KHSRPQ92945 711 aaKnown RBP eCLIP8.47□□□□□ -1.05
ATXN3-245ENST00000556958 PAPPAQ13219 1627 aa8.47□□□□□ -1.05
ATXN3-245ENST00000556958 IFT172Q9UG01 1749 aa8.46□□□□□ -1.05
ATXN3-245ENST00000556958 PPLO60437 1756 aa8.46□□□□□ -1.05
ATXN3-245ENST00000556958 CCDC85CA6NKD9 419 aa8.46□□□□□ -1.06
ATXN3-245ENST00000556958 VEGFAP15692 232 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-245ENST00000556958 HCSTQ9UBK5 93 aa8.46□□□□□ -1.06
ATXN3-245ENST00000556958 CRYBG1Q9Y4K1 1723 aa8.46□□□□□ -1.06
ATXN3-245ENST00000556958 C10orf71Q711Q0 1435 aa8.46□□□□□ -1.06
ATXN3-245ENST00000556958 RGPD8O14715 1765 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-245ENST00000556958 FCHSD2O94868 740 aa8.45□□□□□ -1.06
ATXN3-245ENST00000556958 STAC3Q96MF2 364 aa8.45□□□□□ -1.06
ATXN3-245ENST00000556958 TOPAZ1Q8N9V7 1692 aa8.45□□□□□ -1.06
ATXN3-245ENST00000556958 WDR90Q96KV7 1748 aa8.44□□□□□ -1.06
ATXN3-245ENST00000556958 ECM2O94769 699 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-245ENST00000556958 SRPK2P78362 688 aaKnown RBP8.44□□□□□ -1.06
ATXN3-245ENST00000556958 POTEEQ6S8J3 1075 aa8.44□□□□□ -1.06
ATXN3-245ENST00000556958 AK7Q96M32 723 aa8.44□□□□□ -1.06
ATXN3-245ENST00000556958 RNF181Q9P0P0 153 aa8.44□□□□□ -1.06
ATXN3-245ENST00000556958 USP47Q96K76 1375 aa8.44□□□□□ -1.06
ATXN3-245ENST00000556958 CPSF1Q10570 1443 aaKnown RBP8.44□□□□□ -1.06
ATXN3-245ENST00000556958 SBF2Q86WG5 1849 aa8.43□□□□□ -1.06
ATXN3-245ENST00000556958 A0A0G2JLW4 131 aa8.43□□□□□ -1.06
ATXN3-245ENST00000556958 SOX12O15370 315 aa8.43□□□□□ -1.06
ATXN3-245ENST00000556958 LBX1P52954 281 aa8.43□□□□□ -1.06
ATXN3-245ENST00000556958 EFCAB3Q8N7B9 438 aa8.43□□□□□ -1.06
ATXN3-245ENST00000556958 MKRN1Q9UHC7 482 aaKnown RBP8.43□□□□□ -1.06
ATXN3-245ENST00000556958 MPHOSPH9Q99550 1183 aa8.42□□□□□ -1.06
ATXN3-245ENST00000556958 CABP1Q9NZU7 370 aa8.42□□□□□ -1.06
ATXN3-245ENST00000556958 ANKRD36BQ8N2N9 1353 aa8.42□□□□□ -1.06
ATXN3-245ENST00000556958 ARHGEF28Q8N1W1 1705 aaKnown RBP8.41□□□□□ -1.06
ATXN3-245ENST00000556958 ZC3H4Q9UPT8 1303 aaKnown RBP8.41□□□□□ -1.06
ATXN3-245ENST00000556958 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.41□□□□□ -1.06
ATXN3-245ENST00000556958 WBP1LQ9NX94 342 aa8.41□□□□□ -1.06
ATXN3-245ENST00000556958 KDM2AQ9Y2K7 1162 aa8.41□□□□□ -1.06
ATXN3-245ENST00000556958 GLTPD2A6NH11 291 aa8.4□□□□□ -1.06
ATXN3-245ENST00000556958 PHF14O94880 888 aa8.4□□□□□ -1.06
ATXN3-245ENST00000556958 SSFA2P28290 1259 aa8.4□□□□□ -1.06
ATXN3-245ENST00000556958 CFAP44Q96MT7 982 aa8.4□□□□□ -1.06
ATXN3-245ENST00000556958 PIM2Q9P1W9 311 aa8.4□□□□□ -1.06
ATXN3-245ENST00000556958 ABCC6O95255 1503 aa8.39□□□□□ -1.07
ATXN3-245ENST00000556958 KCPQ6ZWJ8 1503 aa8.39□□□□□ -1.07
ATXN3-245ENST00000556958 PXDNLA1KZ92 1463 aa8.39□□□□□ -1.07
ATXN3-245ENST00000556958 NSD3Q9BZ95 1437 aa8.39□□□□□ -1.07
ATXN3-245ENST00000556958 MMP10P09238 476 aa8.39□□□□□ -1.07
ATXN3-245ENST00000556958 DPEP1P16444 411 aa8.39□□□□□ -1.07
ATXN3-245ENST00000556958 PBX2P40425 430 aa8.39□□□□□ -1.07
ATXN3-245ENST00000556958 MAP2K1Q02750 393 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-245ENST00000556958 DALRD3Q5D0E6 543 aaKnown RBP8.39□□□□□ -1.07
ATXN3-245ENST00000556958 NLGN1Q8N2Q7 840 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms