RNA–Protein interactions for RNA: ENST00000556674.1

TGFB3-206, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-206ENST00000556674 PPP2R1AP30153 589 aa21.68■■□□□ 1.06
TGFB3-206ENST00000556674 MSL1Q68DK7 614 aa21.68■■□□□ 1.06
TGFB3-206ENST00000556674 AEBP1Q8IUX7 1158 aa21.68■■□□□ 1.06
TGFB3-206ENST00000556674 ADCY9O60503 1353 aa21.67■■□□□ 1.06
TGFB3-206ENST00000556674 C1orf141Q5JVX7 400 aa21.67■■□□□ 1.06
TGFB3-206ENST00000556674 ZNF526Q8TF50 670 aaPredicted RBP21.67■■□□□ 1.06
TGFB3-206ENST00000556674 DCAF5Q96JK2 942 aa21.67■■□□□ 1.06
TGFB3-206ENST00000556674 NUDCQ9Y266 331 aa21.67■■□□□ 1.06
TGFB3-206ENST00000556674 ZNF530Q6P9A1 599 aaPredicted RBP21.66■■□□□ 1.06
TGFB3-206ENST00000556674 SMARCC1Q92922 1105 aaPredicted RBP21.66■■□□□ 1.06
TGFB3-206ENST00000556674 TOGARAM1Q9Y4F4 1720 aa21.66■■□□□ 1.06
TGFB3-206ENST00000556674 ITGB4P16144 1822 aa21.64■■□□□ 1.06
TGFB3-206ENST00000556674 ERVV-2B6SEH9 535 aa21.64■■□□□ 1.05
TGFB3-206ENST00000556674 MPRIPQ6WCQ1 1025 aa21.64■■□□□ 1.05
TGFB3-206ENST00000556674 TMOD3Q9NYL9 352 aa21.64■■□□□ 1.05
TGFB3-206ENST00000556674 CD2APQ9Y5K6 639 aa21.64■■□□□ 1.05
TGFB3-206ENST00000556674 U2SURPO15042 1029 aaKnown RBP21.63■■□□□ 1.05
TGFB3-206ENST00000556674 DDX10Q13206 875 aaKnown RBP21.63■■□□□ 1.05
TGFB3-206ENST00000556674 RALBP1Q15311 655 aa21.63■■□□□ 1.05
TGFB3-206ENST00000556674 HMOX1P09601 288 aa21.62■■□□□ 1.05
TGFB3-206ENST00000556674 AKAP4Q5JQC9 854 aa21.61■■□□□ 1.05
TGFB3-206ENST00000556674 PALLDQ8WX93 1383 aa21.61■■□□□ 1.05
TGFB3-206ENST00000556674 PIGBQ92521 554 aa21.6■■□□□ 1.05
TGFB3-206ENST00000556674 C5P01031 1676 aa21.59■■□□□ 1.05
TGFB3-206ENST00000556674 KDM6AO15550 1401 aaPredicted RBP21.56■■□□□ 1.04
TGFB3-206ENST00000556674 GAS2L2Q8NHY3 880 aa21.56■■□□□ 1.04
TGFB3-206ENST00000556674 WWC3Q9ULE0 1092 aa21.56■■□□□ 1.04
TGFB3-206ENST00000556674 FCHSD2O94868 740 aa21.55■■□□□ 1.04
TGFB3-206ENST00000556674 CABP4P57796 275 aa21.55■■□□□ 1.04
TGFB3-206ENST00000556674 KIF3CO14782 793 aa21.54■■□□□ 1.04
TGFB3-206ENST00000556674 U2AF1L5P0DN76 240 aaPredicted RBP21.54■■□□□ 1.04
TGFB3-206ENST00000556674 U2AF1Q01081 240 aaKnown RBP eCLIP21.54■■□□□ 1.04
TGFB3-206ENST00000556674 SCN11AQ9UI33 1791 aa21.53■■□□□ 1.04
TGFB3-206ENST00000556674 MTHFSDQ2M296 383 aaKnown RBP21.53■■□□□ 1.04
TGFB3-206ENST00000556674 FLAD1Q8NFF5 587 aa21.53■■□□□ 1.04
TGFB3-206ENST00000556674 MYBBP1AQ9BQG0 1328 aaKnown RBP21.53■■□□□ 1.04
TGFB3-206ENST00000556674 RSPH6AQ9H0K4 717 aa21.52■■□□□ 1.04
TGFB3-206ENST00000556674 ZNF831Q5JPB2 1677 aa21.51■■□□□ 1.03
TGFB3-206ENST00000556674 TAF1LQ8IZX4 1826 aa21.51■■□□□ 1.03
TGFB3-206ENST00000556674 LOC102724428A0A0B4J2F2 783 aa21.51■■□□□ 1.03
TGFB3-206ENST00000556674 PRKAR2BP31323 418 aa21.51■■□□□ 1.03
TGFB3-206ENST00000556674 SIK1P57059 783 aa21.51■■□□□ 1.03
TGFB3-206ENST00000556674 ADAMTS7Q9UKP4 1686 aa21.5■■□□□ 1.03
TGFB3-206ENST00000556674 NEFMP07197 916 aa21.5■■□□□ 1.03
TGFB3-206ENST00000556674 AMIGO3Q86WK7 504 aa21.5■■□□□ 1.03
TGFB3-206ENST00000556674 PNNQ9H307 717 aaKnown RBP21.5■■□□□ 1.03
TGFB3-206ENST00000556674 ATG3Q9NT62 314 aa21.5■■□□□ 1.03
TGFB3-206ENST00000556674 ASAP1Q9ULH1 1129 aa21.5■■□□□ 1.03
TGFB3-206ENST00000556674 MRC1P22897 1456 aa21.5■■□□□ 1.03
TGFB3-206ENST00000556674 ZNF316A6NFI3 1004 aaPredicted RBP21.49■■□□□ 1.03
TGFB3-206ENST00000556674 GNAT3A8MTJ3 354 aa21.48■■□□□ 1.03
TGFB3-206ENST00000556674 RNMTO43148 476 aaKnown RBP21.48■■□□□ 1.03
TGFB3-206ENST00000556674 APLP1P51693 650 aa21.48■■□□□ 1.03
TGFB3-206ENST00000556674 SMIM5Q71RC9 77 aa21.48■■□□□ 1.03
TGFB3-206ENST00000556674 NFATC2IPQ8NCF5 419 aa21.48■■□□□ 1.03
TGFB3-206ENST00000556674 SLC52A2Q9HAB3 445 aa21.48■■□□□ 1.03
TGFB3-206ENST00000556674 C4BP0C0L5 1744 aa21.48■■□□□ 1.03
TGFB3-206ENST00000556674 PHF14O94880 888 aa21.46■■□□□ 1.03
TGFB3-206ENST00000556674 ATP6V1AP38606 617 aa21.46■■□□□ 1.03
TGFB3-206ENST00000556674 DNAJC5GQ8N7S2 189 aa21.46■■□□□ 1.03
TGFB3-206ENST00000556674 AK7Q96M32 723 aa21.46■■□□□ 1.03
TGFB3-206ENST00000556674 VIRMAQ69YN4 1812 aaKnown RBP21.45■■□□□ 1.02
TGFB3-206ENST00000556674 UBR3Q6ZT12 1888 aa21.44■■□□□ 1.02
TGFB3-206ENST00000556674 PRKRIP1Q9H875 184 aaPredicted RBP21.44■■□□□ 1.02
TGFB3-206ENST00000556674 LGR6Q9HBX8 967 aa21.44■■□□□ 1.02
TGFB3-206ENST00000556674 CICQ96RK0 1608 aaPredicted RBP21.44■■□□□ 1.02
TGFB3-206ENST00000556674 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.43■■□□□ 1.02
TGFB3-206ENST00000556674 TEFQ10587 303 aa21.43■■□□□ 1.02
TGFB3-206ENST00000556674 PHACTR3Q96KR7 559 aa21.43■■□□□ 1.02
TGFB3-206ENST00000556674 RBM42Q9BTD8 480 aaKnown RBP21.43■■□□□ 1.02
TGFB3-206ENST00000556674 HTATSF1O43719 755 aaKnown RBP21.42■■□□□ 1.02
TGFB3-206ENST00000556674 RTF1Q92541 710 aaKnown RBP21.42■■□□□ 1.02
TGFB3-206ENST00000556674 TOMM70O94826 608 aa21.41■■□□□ 1.02
TGFB3-206ENST00000556674 CEMIPQ8WUJ3 1361 aa21.4■■□□□ 1.02
TGFB3-206ENST00000556674 MAPK8IP3Q9UPT6 1336 aa21.39■■□□□ 1.01
TGFB3-206ENST00000556674 SSFA2P28290 1259 aa21.39■■□□□ 1.01
TGFB3-206ENST00000556674 ITPK1Q13572 414 aa21.39■■□□□ 1.01
TGFB3-206ENST00000556674 RC3H1Q5TC82 1133 aaKnown RBP21.39■■□□□ 1.01
TGFB3-206ENST00000556674 LINC00116Q8NCU8 138 aa21.39■■□□□ 1.01
TGFB3-206ENST00000556674 CNTNAP4Q9C0A0 1308 aa21.38■■□□□ 1.01
TGFB3-206ENST00000556674 PTCD1O75127 700 aaKnown RBP21.38■■□□□ 1.01
TGFB3-206ENST00000556674 IL17REQ8NFR9 667 aa21.38■■□□□ 1.01
TGFB3-206ENST00000556674 TTC5Q8N0Z6 440 aa21.37■■□□□ 1.01
TGFB3-206ENST00000556674 VSIG10Q8N0Z9 540 aa21.37■■□□□ 1.01
TGFB3-206ENST00000556674 PLEKHF1Q96S99 279 aa21.37■■□□□ 1.01
TGFB3-206ENST00000556674 COL5A3P25940 1745 aaPredicted RBP21.37■■□□□ 1.01
TGFB3-206ENST00000556674 SLC4A9Q96Q91 983 aa21.36■■□□□ 1.01
TGFB3-206ENST00000556674 NMRK2Q9NPI5 230 aa21.36■■□□□ 1.01
TGFB3-206ENST00000556674 PXDNLA1KZ92 1463 aa21.36■■□□□ 1.01
TGFB3-206ENST00000556674 SIPA1L3O60292 1781 aaPredicted RBP21.36■■□□□ 1.01
TGFB3-206ENST00000556674 GNPATO15228 680 aa21.35■■□□□ 1.01
TGFB3-206ENST00000556674 ADRA2BP18089 450 aa21.35■■□□□ 1.01
TGFB3-206ENST00000556674 WDR43Q15061 677 aaKnown RBP eCLIP21.35■■□□□ 1.01
TGFB3-206ENST00000556674 WDR90Q96KV7 1748 aa21.35■■□□□ 1.01
TGFB3-206ENST00000556674 KIAA1551Q9HCM1 1747 aa21.35■■□□□ 1.01
TGFB3-206ENST00000556674 BCS1LQ9Y276 419 aa21.34■■□□□ 1.01
TGFB3-206ENST00000556674 RTCBQ9Y3I0 505 aaKnown RBP21.34■■□□□ 1.01
TGFB3-206ENST00000556674 UBR2Q8IWV8 1755 aa21.33■■□□□ 1.01
TGFB3-206ENST00000556674 MMP10P09238 476 aa21.33■■□□□ 1.01
TGFB3-206ENST00000556674 NFE2L2Q16236 605 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms