RNA–Protein interactions for RNA: ENST00000556657.1

AL139099.3-201, humanhuman

TSL 3 BASIC

Gene AL139099.3, Length 401 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139099.3-201ENST00000556657 ATG3Q9NT62 314 aa17.38■□□□□ 0.37
AL139099.3-201ENST00000556657 ASAP1Q9ULH1 1129 aa17.38■□□□□ 0.37
AL139099.3-201ENST00000556657 ATF5Q9Y2D1 282 aaPredicted RBP17.38■□□□□ 0.37
AL139099.3-201ENST00000556657 PAPPAQ13219 1627 aa17.38■□□□□ 0.37
AL139099.3-201ENST00000556657 LY75O60449 1722 aa17.38■□□□□ 0.37
AL139099.3-201ENST00000556657 PTGER2P43116 358 aa17.37■□□□□ 0.37
AL139099.3-201ENST00000556657 U2SURPO15042 1029 aaKnown RBP17.36■□□□□ 0.37
AL139099.3-201ENST00000556657 PNPLA7Q6ZV29 1317 aa17.36■□□□□ 0.37
AL139099.3-201ENST00000556657 NFATC2IPQ8NCF5 419 aa17.35■□□□□ 0.37
AL139099.3-201ENST00000556657 SGIP1Q9BQI5 828 aa17.35■□□□□ 0.37
AL139099.3-201ENST00000556657 CASZ1Q86V15 1759 aa17.35■□□□□ 0.37
AL139099.3-201ENST00000556657 ATP6V1AP38606 617 aa17.34■□□□□ 0.37
AL139099.3-201ENST00000556657 MTHFSDQ2M296 383 aaKnown RBP17.34■□□□□ 0.37
AL139099.3-201ENST00000556657 ITGB4P16144 1822 aa17.33■□□□□ 0.37
AL139099.3-201ENST00000556657 FCHSD2O94868 740 aa17.33■□□□□ 0.36
AL139099.3-201ENST00000556657 DSG3P32926 999 aa17.33■□□□□ 0.36
AL139099.3-201ENST00000556657 TOGARAM1Q9Y4F4 1720 aa17.33■□□□□ 0.36
AL139099.3-201ENST00000556657 COL3A1P02461 1466 aaPredicted RBP17.32■□□□□ 0.36
AL139099.3-201ENST00000556657 KDM6AO15550 1401 aaPredicted RBP17.32■□□□□ 0.36
AL139099.3-201ENST00000556657 COL23A1Q86Y22 540 aaPredicted RBP17.32■□□□□ 0.36
AL139099.3-201ENST00000556657 GAS2L2Q8NHY3 880 aa17.32■□□□□ 0.36
AL139099.3-201ENST00000556657 AK7Q96M32 723 aa17.32■□□□□ 0.36
AL139099.3-201ENST00000556657 RNMTO43148 476 aaKnown RBP17.31■□□□□ 0.36
AL139099.3-201ENST00000556657 POLD1P28340 1107 aa17.31■□□□□ 0.36
AL139099.3-201ENST00000556657 RALBP1Q15311 655 aa17.31■□□□□ 0.36
AL139099.3-201ENST00000556657 RC3H1Q5TC82 1133 aaKnown RBP17.31■□□□□ 0.36
AL139099.3-201ENST00000556657 ARXQ96QS3 562 aa17.31■□□□□ 0.36
AL139099.3-201ENST00000556657 SLC52A2Q9HAB3 445 aa17.31■□□□□ 0.36
AL139099.3-201ENST00000556657 LGR6Q9HBX8 967 aa17.31■□□□□ 0.36
AL139099.3-201ENST00000556657 RBM42Q9BTD8 480 aaKnown RBP17.3■□□□□ 0.36
AL139099.3-201ENST00000556657 GNAT3A8MTJ3 354 aa17.29■□□□□ 0.36
AL139099.3-201ENST00000556657 U2AF1L5P0DN76 240 aaPredicted RBP17.29■□□□□ 0.36
AL139099.3-201ENST00000556657 SSFA2P28290 1259 aa17.29■□□□□ 0.36
AL139099.3-201ENST00000556657 U2AF1Q01081 240 aaKnown RBP eCLIP17.29■□□□□ 0.36
AL139099.3-201ENST00000556657 DDX10Q13206 875 aaKnown RBP17.29■□□□□ 0.36
AL139099.3-201ENST00000556657 ITPK1Q13572 414 aa17.29■□□□□ 0.36
AL139099.3-201ENST00000556657 LINC00116Q8NCU8 138 aa17.29■□□□□ 0.36
AL139099.3-201ENST00000556657 QSER1Q2KHR3 1735 aa17.29■□□□□ 0.36
AL139099.3-201ENST00000556657 RSPH6AQ9H0K4 717 aa17.28■□□□□ 0.36
AL139099.3-201ENST00000556657 SYT17Q9BSW7 474 aa17.27■□□□□ 0.36
AL139099.3-201ENST00000556657 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.26■□□□□ 0.35
AL139099.3-201ENST00000556657 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
AL139099.3-201ENST00000556657 PHACTR3Q96KR7 559 aa17.26■□□□□ 0.35
AL139099.3-201ENST00000556657 SLC4A9Q96Q91 983 aa17.26■□□□□ 0.35
AL139099.3-201ENST00000556657 PNNQ9H307 717 aaKnown RBP17.26■□□□□ 0.35
AL139099.3-201ENST00000556657 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
AL139099.3-201ENST00000556657 TRAPPC3LQ5T215 181 aa17.25■□□□□ 0.35
AL139099.3-201ENST00000556657 IL17REQ8NFR9 667 aa17.25■□□□□ 0.35
AL139099.3-201ENST00000556657 FHDC1Q9C0D6 1143 aaPredicted RBP17.25■□□□□ 0.35
AL139099.3-201ENST00000556657 RTCBQ9Y3I0 505 aaKnown RBP17.25■□□□□ 0.35
AL139099.3-201ENST00000556657 C5P01031 1676 aa17.25■□□□□ 0.35
AL139099.3-201ENST00000556657 MAP3K5Q99683 1374 aa17.25■□□□□ 0.35
AL139099.3-201ENST00000556657 GNPATO15228 680 aa17.24■□□□□ 0.35
AL139099.3-201ENST00000556657 HTATSF1O43719 755 aaKnown RBP17.24■□□□□ 0.35
AL139099.3-201ENST00000556657 C4BP0C0L5 1744 aa17.24■□□□□ 0.35
AL139099.3-201ENST00000556657 CNTNAP4Q9C0A0 1308 aa17.23■□□□□ 0.35
AL139099.3-201ENST00000556657 ZNF831Q5JPB2 1677 aa17.23■□□□□ 0.35
AL139099.3-201ENST00000556657 RPS6KA4O75676 772 aa17.23■□□□□ 0.35
AL139099.3-201ENST00000556657 NEFMP07197 916 aa17.23■□□□□ 0.35
AL139099.3-201ENST00000556657 TEFQ10587 303 aa17.23■□□□□ 0.35
AL139099.3-201ENST00000556657 VSIG10Q8N0Z9 540 aa17.23■□□□□ 0.35
AL139099.3-201ENST00000556657 TAF1LQ8IZX4 1826 aa17.23■□□□□ 0.35
AL139099.3-201ENST00000556657 SCN11AQ9UI33 1791 aa17.21■□□□□ 0.35
AL139099.3-201ENST00000556657 PHF14O94880 888 aa17.21■□□□□ 0.35
AL139099.3-201ENST00000556657 RTF1Q92541 710 aaKnown RBP17.21■□□□□ 0.35
AL139099.3-201ENST00000556657 MRC1P22897 1456 aa17.2■□□□□ 0.34
AL139099.3-201ENST00000556657 AMIGO3Q86WK7 504 aa17.2■□□□□ 0.34
AL139099.3-201ENST00000556657 NLGN1Q8N2Q7 840 aa17.2■□□□□ 0.34
AL139099.3-201ENST00000556657 TEX13AQ9BXU3 409 aaPredicted RBP17.2■□□□□ 0.34
AL139099.3-201ENST00000556657 COL24A1Q17RW2 1714 aa17.19■□□□□ 0.34
AL139099.3-201ENST00000556657 CEMIPQ8WUJ3 1361 aa17.19■□□□□ 0.34
AL139099.3-201ENST00000556657 SLC39A6Q13433 755 aa17.19■□□□□ 0.34
AL139099.3-201ENST00000556657 TTC5Q8N0Z6 440 aa17.19■□□□□ 0.34
AL139099.3-201ENST00000556657 ARHGEF1Q92888 912 aaKnown RBP17.19■□□□□ 0.34
AL139099.3-201ENST00000556657 ADAMTS7Q9UKP4 1686 aa17.18■□□□□ 0.34
AL139099.3-201ENST00000556657 RFC4P35249 363 aa17.18■□□□□ 0.34
AL139099.3-201ENST00000556657 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
AL139099.3-201ENST00000556657 ZNF790Q6PG37 636 aa17.18■□□□□ 0.34
AL139099.3-201ENST00000556657 CD2APQ9Y5K6 639 aa17.18■□□□□ 0.34
AL139099.3-201ENST00000556657 MYBBP1AQ9BQG0 1328 aaKnown RBP17.18■□□□□ 0.34
AL139099.3-201ENST00000556657 INTS5Q6P9B9 1019 aaKnown RBP17.17■□□□□ 0.34
AL139099.3-201ENST00000556657 PLEKHF1Q96S99 279 aa17.17■□□□□ 0.34
AL139099.3-201ENST00000556657 TUBGCP6Q96RT7 1819 aa17.17■□□□□ 0.34
AL139099.3-201ENST00000556657 STARD3NLO95772 234 aa17.16■□□□□ 0.34
AL139099.3-201ENST00000556657 CYP19A1P11511 503 aaPredicted RBP17.16■□□□□ 0.34
AL139099.3-201ENST00000556657 MSL1Q68DK7 614 aa17.16■□□□□ 0.34
AL139099.3-201ENST00000556657 SMIM5Q71RC9 77 aa17.16■□□□□ 0.34
AL139099.3-201ENST00000556657 DNAJC10Q8IXB1 793 aa17.16■□□□□ 0.34
AL139099.3-201ENST00000556657 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
AL139099.3-201ENST00000556657 BTBD11A6QL63 1104 aa17.15■□□□□ 0.34
AL139099.3-201ENST00000556657 UBR3Q6ZT12 1888 aa17.15■□□□□ 0.34
AL139099.3-201ENST00000556657 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
AL139099.3-201ENST00000556657 FMNL2Q96PY5 1086 aa17.14■□□□□ 0.33
AL139099.3-201ENST00000556657 YY1P25490 414 aa17.13■□□□□ 0.33
AL139099.3-201ENST00000556657 TAF7Q15545 349 aaPredicted RBP17.13■□□□□ 0.33
AL139099.3-201ENST00000556657 PRKRIP1Q9H875 184 aaPredicted RBP17.13■□□□□ 0.33
AL139099.3-201ENST00000556657 GYS1P13807 737 aa17.12■□□□□ 0.33
AL139099.3-201ENST00000556657 NFE2L2Q16236 605 aa17.12■□□□□ 0.33
AL139099.3-201ENST00000556657 MCM10Q7L590 875 aa17.12■□□□□ 0.33
AL139099.3-201ENST00000556657 KLHL34Q8N239 644 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms