RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 BEGAINQ9BUH8 593 aa6.36□□□□□ -1.39
ATXN3-242ENST00000556644 PIM2Q9P1W9 311 aa6.36□□□□□ -1.39
ATXN3-242ENST00000556644 UBR3Q6ZT12 1888 aa6.36□□□□□ -1.39
ATXN3-242ENST00000556644 TAF1LQ8IZX4 1826 aa6.36□□□□□ -1.39
ATXN3-242ENST00000556644 DEFB115Q30KQ5 88 aa6.35□□□□□ -1.39
ATXN3-242ENST00000556644 CCDC87Q9NVE4 849 aa6.35□□□□□ -1.39
ATXN3-242ENST00000556644 ABT1Q9ULW3 272 aaKnown RBP6.35□□□□□ -1.39
ATXN3-242ENST00000556644 LTBP1Q14766 1721 aa6.35□□□□□ -1.39
ATXN3-242ENST00000556644 NFAT5O94916 1531 aa6.35□□□□□ -1.39
ATXN3-242ENST00000556644 ZC3H4Q9UPT8 1303 aaKnown RBP6.34□□□□□ -1.39
ATXN3-242ENST00000556644 RASSF10A6NK89 507 aa6.34□□□□□ -1.39
ATXN3-242ENST00000556644 GNPATO15228 680 aa6.34□□□□□ -1.39
ATXN3-242ENST00000556644 LMNB1P20700 586 aa6.34□□□□□ -1.39
ATXN3-242ENST00000556644 SRPK2P78362 688 aaKnown RBP6.34□□□□□ -1.39
ATXN3-242ENST00000556644 PPP4R3CPQ6ZMV5 832 aa6.34□□□□□ -1.39
ATXN3-242ENST00000556644 ANKRD24Q8TF21 1146 aa6.34□□□□□ -1.39
ATXN3-242ENST00000556644 CASP8AP2Q9UKL3 1982 aa6.34□□□□□ -1.39
ATXN3-242ENST00000556644 KDM6AO15550 1401 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-242ENST00000556644 CUL9Q8IWT3 2517 aa6.33□□□□□ -1.4
ATXN3-242ENST00000556644 SSFA2P28290 1259 aa6.33□□□□□ -1.4
ATXN3-242ENST00000556644 FXR1P51114 621 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATXN3-242ENST00000556644 KCNH5Q8NCM2 988 aa6.33□□□□□ -1.4
ATXN3-242ENST00000556644 LINC00116Q8NCU8 138 aa6.33□□□□□ -1.4
ATXN3-242ENST00000556644 GCC1Q96CN9 775 aa6.33□□□□□ -1.4
ATXN3-242ENST00000556644 LTV1Q96GA3 475 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-242ENST00000556644 CABP2Q9NPB3 220 aa6.33□□□□□ -1.4
ATXN3-242ENST00000556644 C4AP0C0L4 1744 aa6.33□□□□□ -1.4
ATXN3-242ENST00000556644 NSD3Q9BZ95 1437 aa6.33□□□□□ -1.4
ATXN3-242ENST00000556644 LOC105371045A0A1W2PR82 267 aa6.32□□□□□ -1.4
ATXN3-242ENST00000556644 AOC2O75106 756 aa6.32□□□□□ -1.4
ATXN3-242ENST00000556644 CYP4F22Q6NT55 531 aa6.32□□□□□ -1.4
ATXN3-242ENST00000556644 MPRIPQ6WCQ1 1025 aa6.32□□□□□ -1.4
ATXN3-242ENST00000556644 SLC17A8Q8NDX2 589 aa6.32□□□□□ -1.4
ATXN3-242ENST00000556644 CAPNS2Q96L46 248 aa6.32□□□□□ -1.4
ATXN3-242ENST00000556644 CABP1Q9NZU7 370 aa6.32□□□□□ -1.4
ATXN3-242ENST00000556644 DDNO94850 711 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-242ENST00000556644 ITGBL1O95965 494 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-242ENST00000556644 TMF1P82094 1093 aa6.31□□□□□ -1.4
ATXN3-242ENST00000556644 EAPPQ56P03 285 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-242ENST00000556644 DPY19L2Q6NUT2 758 aa6.31□□□□□ -1.4
ATXN3-242ENST00000556644 LDHDQ86WU2 507 aa6.31□□□□□ -1.4
ATXN3-242ENST00000556644 GPR101Q96P66 508 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-242ENST00000556644 KDM2AQ9Y2K7 1162 aa6.31□□□□□ -1.4
ATXN3-242ENST00000556644 PARP3Q9Y6F1 533 aa6.31□□□□□ -1.4
ATXN3-242ENST00000556644 THSD7BQ9C0I4 1608 aa6.31□□□□□ -1.4
ATXN3-242ENST00000556644 MEGF6O75095 1541 aa6.3□□□□□ -1.4
ATXN3-242ENST00000556644 TTC21BQ7Z4L5 1316 aa6.3□□□□□ -1.4
ATXN3-242ENST00000556644 NFKBIEO00221 500 aa6.3□□□□□ -1.4
ATXN3-242ENST00000556644 FMR1Q06787 632 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATXN3-242ENST00000556644 MAP1SQ66K74 1059 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-242ENST00000556644 NBPF15Q8N660 670 aa6.3□□□□□ -1.4
ATXN3-242ENST00000556644 ZCRB1Q8TBF4 217 aaKnown RBP6.3□□□□□ -1.4
ATXN3-242ENST00000556644 CLEC11AQ9Y240 323 aa6.3□□□□□ -1.4
ATXN3-242ENST00000556644 ITPK1Q13572 414 aa6.29□□□□□ -1.4
ATXN3-242ENST00000556644 CCDC88AQ3V6T2 1871 aa6.29□□□□□ -1.4
ATXN3-242ENST00000556644 ERFEQ4G0M1 354 aa6.29□□□□□ -1.4
ATXN3-242ENST00000556644 NLGN1Q8N2Q7 840 aa6.29□□□□□ -1.4
ATXN3-242ENST00000556644 GYS1P13807 737 aa6.28□□□□□ -1.4
ATXN3-242ENST00000556644 DDR1Q08345 913 aa6.28□□□□□ -1.4
ATXN3-242ENST00000556644 NBPF1Q3BBV0 1214 aa6.28□□□□□ -1.4
ATXN3-242ENST00000556644 TAF1DQ9H5J8 278 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-242ENST00000556644 LTN1O94822 1766 aa6.28□□□□□ -1.4
ATXN3-242ENST00000556644 LOC102724428A0A0B4J2F2 783 aa6.27□□□□□ -1.41
ATXN3-242ENST00000556644 ECE1P42892 770 aa6.27□□□□□ -1.41
ATXN3-242ENST00000556644 SIK1P57059 783 aa6.27□□□□□ -1.41
ATXN3-242ENST00000556644 TRAPPC3LQ5T215 181 aa6.27□□□□□ -1.41
ATXN3-242ENST00000556644 CNTROBQ8N137 903 aa6.27□□□□□ -1.41
ATXN3-242ENST00000556644 USHBP1Q8N6Y0 703 aa6.27□□□□□ -1.41
ATXN3-242ENST00000556644 SMARCC1Q92922 1105 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-242ENST00000556644 ADAMTS7Q9UKP4 1686 aa6.26□□□□□ -1.41
ATXN3-242ENST00000556644 PITPNM2Q9BZ72 1349 aa6.26□□□□□ -1.41
ATXN3-242ENST00000556644 ABCB7O75027 752 aa6.26□□□□□ -1.41
ATXN3-242ENST00000556644 ATP6V1AP38606 617 aa6.26□□□□□ -1.41
ATXN3-242ENST00000556644 CIAPIN1Q6FI81 312 aa6.26□□□□□ -1.41
ATXN3-242ENST00000556644 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.26□□□□□ -1.41
ATXN3-242ENST00000556644 PIGBQ92521 554 aa6.26□□□□□ -1.41
ATXN3-242ENST00000556644 ARHGEF1Q92888 912 aaKnown RBP6.26□□□□□ -1.41
ATXN3-242ENST00000556644 SRP68Q9UHB9 627 aaKnown RBP6.26□□□□□ -1.41
ATXN3-242ENST00000556644 RTCBQ9Y3I0 505 aaKnown RBP6.26□□□□□ -1.41
ATXN3-242ENST00000556644 FAM208AQ9UK61 1670 aaKnown RBP6.26□□□□□ -1.41
ATXN3-242ENST00000556644 IQCA1LA6NCM1 817 aa6.25□□□□□ -1.41
ATXN3-242ENST00000556644 CA12O43570 354 aa6.25□□□□□ -1.41
ATXN3-242ENST00000556644 HMGB2P26583 209 aaKnown RBP6.25□□□□□ -1.41
ATXN3-242ENST00000556644 RFC4P35249 363 aa6.25□□□□□ -1.41
ATXN3-242ENST00000556644 FKBP8Q14318 412 aa6.25□□□□□ -1.41
ATXN3-242ENST00000556644 NME9Q86XW9 330 aa6.25□□□□□ -1.41
ATXN3-242ENST00000556644 PPARGC1BQ86YN6 1023 aaKnown RBP6.25□□□□□ -1.41
ATXN3-242ENST00000556644 MPNDQ8N594 471 aa6.25□□□□□ -1.41
ATXN3-242ENST00000556644 DDX21Q9NR30 783 aaKnown RBP eCLIP6.25□□□□□ -1.41
ATXN3-242ENST00000556644 MAP2P11137 1827 aaKnown RBP6.25□□□□□ -1.41
ATXN3-242ENST00000556644 RGPD2P0DJD1 1756 aa6.24□□□□□ -1.41
ATXN3-242ENST00000556644 TRAF5O00463 557 aa6.24□□□□□ -1.41
ATXN3-242ENST00000556644 DCAF11Q8TEB1 546 aa6.24□□□□□ -1.41
ATXN3-242ENST00000556644 ZIC5Q96T25 663 aa6.24□□□□□ -1.41
ATXN3-242ENST00000556644 MPHOSPH9Q99550 1183 aa6.24□□□□□ -1.41
ATXN3-242ENST00000556644 ASAP1Q9ULH1 1129 aa6.24□□□□□ -1.41
ATXN3-242ENST00000556644 TRIOBPQ9H2D6 2365 aa6.24□□□□□ -1.41
ATXN3-242ENST00000556644 TTC21AQ8NDW8 1320 aa6.24□□□□□ -1.41
ATXN3-242ENST00000556644 ZNF541Q9H0D2 1346 aa6.24□□□□□ -1.41
ATXN3-242ENST00000556644 HAX1O00165 279 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 260.4 ms