RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 CCDC152Q4G0S7 254 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 TCERG1LQ5VWI1 586 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 MTERF4Q7Z6M4 381 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 TRIM50Q86XT4 487 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 CHMP7Q8WUX9 453 aaPredicted RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 DHX38Q92620 1227 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 FMNL2Q96PY5 1086 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 TMX1Q9H3N1 280 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 PPCSQ9HAB8 311 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 SFMBT1Q9UHJ3 866 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 ERCC6L2Q5T890 1561 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 H3BRB1 525 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 MBD3O95983 291 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 ZNF76P36508 570 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 CASP2P42575 452 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 LMAN1P49257 510 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 PSEN1P49768 467 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 ATP1A2P50993 1020 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 CLUL1Q15846 466 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 PPP2R5EQ16537 467 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 GIGYF2Q6Y7W6 1299 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 RPS6KC1Q96S38 1066 aa2.19□□□□□ -2.06
KTN1-224ENST00000556631 TUT1Q9H6E5 874 aaKnown RBP2.19□□□□□ -2.06
KTN1-224ENST00000556631 UNC13AQ9UPW8 1703 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 SMARCA2P51531 1590 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 TTC36A6NLP5 189 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 FIBPO43427 364 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 RAB11FIP3O75154 756 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 SSTR3P32745 418 aaPredicted RBP2.18□□□□□ -2.06
KTN1-224ENST00000556631 IKQ13123 557 aaPredicted RBP2.18□□□□□ -2.06
KTN1-224ENST00000556631 LEKR1Q6ZMV7 388 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 DAAM2Q86T65 1068 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 SULF1Q8IWU6 871 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 USP6NLQ92738 828 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 NBPF3Q9H094 633 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 PICK1Q9NRD5 415 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 AASDHPPTQ9NRN7 309 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 HOMER2Q9NSB8 354 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 LRP2BPQ9P2M1 347 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 HOOK1Q9UJC3 728 aaKnown RBP2.18□□□□□ -2.06
KTN1-224ENST00000556631 ZBTB21Q9ULJ3 1066 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 ERICH4A6NGS2 130 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 ZPR1O75312 459 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 CTHP32929 405 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 ODR4Q5SWX8 454 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 SPOUT1Q5T280 376 aaKnown RBP2.18□□□□□ -2.06
KTN1-224ENST00000556631 C4orf50Q6ZRC1 276 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 ERC1Q8IUD2 1116 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 WDR63Q8IWG1 891 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 MNS1Q8NEH6 495 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 NUP133Q8WUM0 1156 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 GBP5Q96PP8 586 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 DDX23Q9BUQ8 820 aaKnown RBP2.18□□□□□ -2.06
KTN1-224ENST00000556631 TPX2Q9ULW0 747 aaKnown RBP2.18□□□□□ -2.06
KTN1-224ENST00000556631 ANKRD33BA6NCL7 494 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 SORBS3O60504 671 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 CD53P19397 219 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 MAN1A1P33908 653 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 KRT9P35527 623 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 TEX35Q5T0J7 233 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 IQCA1Q86XH1 822 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 FMNL3Q8IVF7 1028 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 TRIM22Q8IYM9 498 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 VPS37AQ8NEZ2 397 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 DYDC1Q8WWB3 177 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 NUDT16L1Q9BRJ7 211 aaKnown RBP2.18□□□□□ -2.06
KTN1-224ENST00000556631 GPCPD1Q9NPB8 672 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 BSDC1Q9NW68 430 aaPredicted RBP2.18□□□□□ -2.06
KTN1-224ENST00000556631 PUF60Q9UHX1 559 aaKnown RBP2.18□□□□□ -2.06
KTN1-224ENST00000556631 FEZ2Q9UHY8 353 aaPredicted RBP2.18□□□□□ -2.06
KTN1-224ENST00000556631 LIMCH1Q9UPQ0 1083 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 SMC3Q9UQE7 1217 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 ERBB3P21860 1342 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 GOLGA6L19H0YKK7 550 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 KIF3BO15066 747 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 ZNF500O60304 480 aaPredicted RBP2.18□□□□□ -2.06
KTN1-224ENST00000556631 HOXC8P31273 242 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 MCM6Q14566 821 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 C1orf228Q6PIY5 440 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 WAPLQ7Z5K2 1190 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 AMOTL1Q8IY63 956 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 GSDMBQ8TAX9 411 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 RBM46Q8TBY0 533 aaKnown RBP2.18□□□□□ -2.06
KTN1-224ENST00000556631 PDCL3Q9H2J4 239 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 GRPEL1Q9HAV7 217 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 STRN4Q9NRL3 753 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 CWC15Q9P013 229 aaKnown RBP2.18□□□□□ -2.06
KTN1-224ENST00000556631 KIF3AQ9Y496 699 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 COL4A3BPQ9Y5P4 624 aa2.18□□□□□ -2.06
KTN1-224ENST00000556631 PLEKHG3A1L390 1219 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 B4DLN1 442 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 FMNL1O95466 1100 aaPredicted RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 ATP2B4P23634 1241 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 MLECQ14165 292 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 METTL24Q5JXM2 366 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 SDE2Q6IQ49 451 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 RINLQ6ZS11 566 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 CCDC144CPQ8IYA2 1237 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 DZIP1LQ8IYY4 767 aaKnown RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 216.9 ms