RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 TRIM21P19474 475 aaKnown RBP12.6□□□□□ -0.39
SPTB-208ENST00000556626 EXOSC9Q06265 439 aaKnown RBP12.6□□□□□ -0.39
SPTB-208ENST00000556626 ARFGAP3Q9NP61 516 aa12.6□□□□□ -0.39
SPTB-208ENST00000556626 SH2B1Q9NRF2 756 aaPredicted RBP12.6□□□□□ -0.39
SPTB-208ENST00000556626 ANAPC15P60006 121 aa12.6□□□□□ -0.39
SPTB-208ENST00000556626 RUSC2Q8N2Y8 1516 aa12.6□□□□□ -0.39
SPTB-208ENST00000556626 SPECC1Q5M775 1068 aa12.6□□□□□ -0.39
SPTB-208ENST00000556626 CCDC171Q6TFL3 1326 aa12.6□□□□□ -0.39
SPTB-208ENST00000556626 TIAM1Q13009 1591 aa12.6□□□□□ -0.39
SPTB-208ENST00000556626 UBE4AQ14139 1066 aa12.6□□□□□ -0.39
SPTB-208ENST00000556626 C6orf163Q5TEZ5 329 aa12.6□□□□□ -0.39
SPTB-208ENST00000556626 EHBP1Q8NDI1 1231 aa12.6□□□□□ -0.39
SPTB-208ENST00000556626 NCOA2Q15596 1464 aa12.6□□□□□ -0.39
SPTB-208ENST00000556626 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
SPTB-208ENST00000556626 TNPO1Q92973 898 aaKnown RBP12.59□□□□□ -0.39
SPTB-208ENST00000556626 ANKRD50Q9ULJ7 1429 aa12.59□□□□□ -0.39
SPTB-208ENST00000556626 SSR1P43307 286 aaKnown RBP12.59□□□□□ -0.39
SPTB-208ENST00000556626 CEP112Q8N8E3 955 aa12.59□□□□□ -0.39
SPTB-208ENST00000556626 NUP133Q8WUM0 1156 aa12.59□□□□□ -0.39
SPTB-208ENST00000556626 ZNF428Q96B54 188 aa12.59□□□□□ -0.39
SPTB-208ENST00000556626 CACNA2D4Q7Z3S7 1137 aa12.59□□□□□ -0.39
SPTB-208ENST00000556626 AACSQ86V21 672 aa12.59□□□□□ -0.39
SPTB-208ENST00000556626 TRMT1Q9NXH9 659 aaKnown RBP12.59□□□□□ -0.39
SPTB-208ENST00000556626 USP25Q9UHP3 1055 aa12.59□□□□□ -0.39
SPTB-208ENST00000556626 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
SPTB-208ENST00000556626 HMGB1P09429 215 aaKnown RBP12.58□□□□□ -0.4
SPTB-208ENST00000556626 CCDC150Q8NCX0 1101 aa12.58□□□□□ -0.4
SPTB-208ENST00000556626 TSR2Q969E8 191 aaKnown RBP12.58□□□□□ -0.4
SPTB-208ENST00000556626 CFAP57Q96MR6 1250 aa12.58□□□□□ -0.4
SPTB-208ENST00000556626 UBAC1Q9BSL1 405 aa12.58□□□□□ -0.4
SPTB-208ENST00000556626 HLTFQ14527 1009 aaKnown RBP eCLIP12.58□□□□□ -0.4
SPTB-208ENST00000556626 SOGA3Q5TF21 947 aa12.58□□□□□ -0.4
SPTB-208ENST00000556626 PNISRQ8TF01 805 aaKnown RBP12.58□□□□□ -0.4
SPTB-208ENST00000556626 CNNM1Q9NRU3 951 aa12.58□□□□□ -0.4
SPTB-208ENST00000556626 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
SPTB-208ENST00000556626 CLCN1P35523 988 aa12.58□□□□□ -0.4
SPTB-208ENST00000556626 ZFP91Q96JP5 570 aaPredicted RBP12.58□□□□□ -0.4
SPTB-208ENST00000556626 ANKRD18BA2A2Z9 1011 aa12.58□□□□□ -0.4
SPTB-208ENST00000556626 YEATS4O95619 227 aa12.58□□□□□ -0.4
SPTB-208ENST00000556626 PAXIP1Q6ZW49 1069 aaPredicted RBP12.58□□□□□ -0.4
SPTB-208ENST00000556626 HOOK3Q86VS8 718 aa12.58□□□□□ -0.4
SPTB-208ENST00000556626 HSF2BPO75031 334 aa12.57□□□□□ -0.4
SPTB-208ENST00000556626 EFCAB5A4FU69 1503 aa12.57□□□□□ -0.4
SPTB-208ENST00000556626 KLHL10Q6JEL2 608 aa12.57□□□□□ -0.4
SPTB-208ENST00000556626 ERBINQ96RT1 1412 aa12.57□□□□□ -0.4
SPTB-208ENST00000556626 MSL1Q68DK7 614 aa12.57□□□□□ -0.4
SPTB-208ENST00000556626 SMAP1Q8IYB5 467 aaPredicted RBP12.57□□□□□ -0.4
SPTB-208ENST00000556626 TSG101Q99816 390 aa12.56□□□□□ -0.4
SPTB-208ENST00000556626 SIL1Q9H173 461 aa12.56□□□□□ -0.4
SPTB-208ENST00000556626 PHAXQ9H814 394 aaKnown RBP12.56□□□□□ -0.4
SPTB-208ENST00000556626 UBE2HP62256 183 aa12.56□□□□□ -0.4
SPTB-208ENST00000556626 DDX19AQ9NUU7 478 aaKnown RBP12.56□□□□□ -0.4
SPTB-208ENST00000556626 FKBP4Q02790 459 aaKnown RBP eCLIP12.56□□□□□ -0.4
SPTB-208ENST00000556626 JADE2Q9NQC1 790 aa12.56□□□□□ -0.4
SPTB-208ENST00000556626 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.56□□□□□ -0.4
SPTB-208ENST00000556626 CCDC94Q9BW85 323 aaPredicted RBP12.56□□□□□ -0.4
SPTB-208ENST00000556626 PTPN23Q9H3S7 1636 aa12.56□□□□□ -0.4
SPTB-208ENST00000556626 HDGFL1Q5TGJ6 251 aa12.55□□□□□ -0.4
SPTB-208ENST00000556626 GGNBP2Q9H3C7 697 aa12.55□□□□□ -0.4
SPTB-208ENST00000556626 MAATS1Q7Z4T9 603 aa12.55□□□□□ -0.4
SPTB-208ENST00000556626 SRGAP3O43295 1099 aa12.55□□□□□ -0.4
SPTB-208ENST00000556626 TTC31Q49AM3 519 aaPredicted RBP12.55□□□□□ -0.4
SPTB-208ENST00000556626 DHX29Q7Z478 1369 aaKnown RBP12.55□□□□□ -0.4
SPTB-208ENST00000556626 TUBB4BP68371 445 aa12.55□□□□□ -0.4
SPTB-208ENST00000556626 NSRP1Q9H0G5 558 aaKnown RBP12.55□□□□□ -0.4
SPTB-208ENST00000556626 UVSSAQ2YD98 709 aa12.55□□□□□ -0.4
SPTB-208ENST00000556626 TMC6Q7Z403 805 aa12.55□□□□□ -0.4
SPTB-208ENST00000556626 NEBLO76041 1014 aa12.55□□□□□ -0.4
SPTB-208ENST00000556626 SSBP05455 408 aaKnown RBP eCLIP12.55□□□□□ -0.4
SPTB-208ENST00000556626 TDO2P48775 406 aa12.55□□□□□ -0.4
SPTB-208ENST00000556626 MATR3P43243 847 aaKnown RBP eCLIP12.55□□□□□ -0.45e-6■■□□□ 12.5
SPTB-208ENST00000556626 ATP2B2Q01814 1243 aa12.55□□□□□ -0.4
SPTB-208ENST00000556626 ZSCAN23Q3MJ62 389 aa12.55□□□□□ -0.4
SPTB-208ENST00000556626 CASKIN1Q8WXD9 1431 aa12.54□□□□□ -0.4
SPTB-208ENST00000556626 CABP2Q9NPB3 220 aa12.54□□□□□ -0.4
SPTB-208ENST00000556626 FSD2A1L4K1 749 aa12.54□□□□□ -0.4
SPTB-208ENST00000556626 CKAP2LQ8IYA6 745 aa12.54□□□□□ -0.4
SPTB-208ENST00000556626 TBC1D2Q9BYX2 928 aa12.54□□□□□ -0.4
SPTB-208ENST00000556626 KLHL40Q2TBA0 621 aa12.54□□□□□ -0.4
SPTB-208ENST00000556626 DDX12PQ92771 950 aa12.54□□□□□ -0.4
SPTB-208ENST00000556626 CKAP4Q07065 602 aaKnown RBP12.53□□□□□ -0.4
SPTB-208ENST00000556626 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
SPTB-208ENST00000556626 CCDC196A0A1B0GTZ2 297 aa12.53□□□□□ -0.4
SPTB-208ENST00000556626 DNAI2Q9GZS0 605 aa12.53□□□□□ -0.4
SPTB-208ENST00000556626 C8orf76Q96K31 380 aa12.53□□□□□ -0.4
SPTB-208ENST00000556626 SEC63Q9UGP8 760 aaKnown RBP12.53□□□□□ -0.4
SPTB-208ENST00000556626 RAB11FIP3O75154 756 aa12.53□□□□□ -0.4
SPTB-208ENST00000556626 CNNM3Q8NE01 707 aa12.52□□□□□ -0.4
SPTB-208ENST00000556626 CPSF2Q9P2I0 782 aaKnown RBP12.52□□□□□ -0.4
SPTB-208ENST00000556626 KIF20AO95235 890 aa12.52□□□□□ -0.4
SPTB-208ENST00000556626 CCDC12Q8WUD4 166 aaPredicted RBP12.52□□□□□ -0.4
SPTB-208ENST00000556626 CTNNBL1Q8WYA6 563 aaPredicted RBP12.52□□□□□ -0.4
SPTB-208ENST00000556626 LARP1Q6PKG0 1096 aaKnown RBP12.52□□□□□ -0.41
SPTB-208ENST00000556626 CTAGE9A4FU28 777 aa12.52□□□□□ -0.41
SPTB-208ENST00000556626 RSPH14Q9UHP6 348 aa12.52□□□□□ -0.41
SPTB-208ENST00000556626 CLGNO14967 610 aa12.52□□□□□ -0.41
SPTB-208ENST00000556626 MX1P20591 662 aa12.52□□□□□ -0.41
SPTB-208ENST00000556626 ZNF165P49910 485 aa12.52□□□□□ -0.41
SPTB-208ENST00000556626 HFM1A2PYH4 1435 aa12.51□□□□□ -0.41
SPTB-208ENST00000556626 SEPT6Q14141 434 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms