RNA–Protein interactions for RNA: ENST00000556565.5

TUBB3-212, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-212ENST00000556565 TFCP2L1Q9NZI6 479 aa23.51■■□□□ 1.35
TUBB3-212ENST00000556565 MAP3K5Q99683 1374 aa23.51■■□□□ 1.35
TUBB3-212ENST00000556565 C4BP0C0L5 1744 aa23.5■■□□□ 1.35
TUBB3-212ENST00000556565 RNMTO43148 476 aaKnown RBP23.5■■□□□ 1.35
TUBB3-212ENST00000556565 HMGB2P26583 209 aaKnown RBP23.5■■□□□ 1.35
TUBB3-212ENST00000556565 NFATC2IPQ8NCF5 419 aa23.5■■□□□ 1.35
TUBB3-212ENST00000556565 LGR6Q9HBX8 967 aa23.5■■□□□ 1.35
TUBB3-212ENST00000556565 PHACTR3Q96KR7 559 aa23.49■■□□□ 1.35
TUBB3-212ENST00000556565 FCHSD2O94868 740 aa23.48■■□□□ 1.35
TUBB3-212ENST00000556565 ITPK1Q13572 414 aa23.48■■□□□ 1.35
TUBB3-212ENST00000556565 MTFR1LQ9H019 292 aa23.48■■□□□ 1.35
TUBB3-212ENST00000556565 SLC52A2Q9HAB3 445 aa23.48■■□□□ 1.35
TUBB3-212ENST00000556565 MYBBP1AQ9BQG0 1328 aaKnown RBP23.48■■□□□ 1.35
TUBB3-212ENST00000556565 ZNF831Q5JPB2 1677 aa23.47■■□□□ 1.35
TUBB3-212ENST00000556565 VIRMAQ69YN4 1812 aaKnown RBP23.47■■□□□ 1.35
TUBB3-212ENST00000556565 ATP6V1AP38606 617 aa23.46■■□□□ 1.35
TUBB3-212ENST00000556565 LINC00116Q8NCU8 138 aa23.46■■□□□ 1.35
TUBB3-212ENST00000556565 ATF5Q9Y2D1 282 aaPredicted RBP23.46■■□□□ 1.35
TUBB3-212ENST00000556565 GNAT3A8MTJ3 354 aa23.45■■□□□ 1.34
TUBB3-212ENST00000556565 AK7Q96M32 723 aa23.45■■□□□ 1.34
TUBB3-212ENST00000556565 SLC4A9Q96Q91 983 aa23.45■■□□□ 1.34
TUBB3-212ENST00000556565 RBM42Q9BTD8 480 aaKnown RBP23.45■■□□□ 1.34
TUBB3-212ENST00000556565 PTGER2P43116 358 aa23.44■■□□□ 1.34
TUBB3-212ENST00000556565 SLC16A10Q8TF71 515 aa23.43■■□□□ 1.34
TUBB3-212ENST00000556565 PPP1R1BQ9UD71 204 aaPredicted RBP23.43■■□□□ 1.34
TUBB3-212ENST00000556565 ZNF316A6NFI3 1004 aaPredicted RBP23.42■■□□□ 1.34
TUBB3-212ENST00000556565 PTCD1O75127 700 aaKnown RBP23.42■■□□□ 1.34
TUBB3-212ENST00000556565 UBR3Q6ZT12 1888 aa23.41■■□□□ 1.34
TUBB3-212ENST00000556565 COL23A1Q86Y22 540 aaPredicted RBP23.41■■□□□ 1.34
TUBB3-212ENST00000556565 IL17REQ8NFR9 667 aa23.41■■□□□ 1.34
TUBB3-212ENST00000556565 SGIP1Q9BQI5 828 aa23.41■■□□□ 1.34
TUBB3-212ENST00000556565 PRKRIP1Q9H875 184 aaPredicted RBP23.41■■□□□ 1.34
TUBB3-212ENST00000556565 COL5A3P25940 1745 aaPredicted RBP23.41■■□□□ 1.34
TUBB3-212ENST00000556565 CICQ96RK0 1608 aaPredicted RBP23.41■■□□□ 1.34
TUBB3-212ENST00000556565 AMIGO3Q86WK7 504 aa23.4■■□□□ 1.34
TUBB3-212ENST00000556565 CEMIPQ8WUJ3 1361 aa23.4■■□□□ 1.34
TUBB3-212ENST00000556565 KCPQ6ZWJ8 1503 aa23.39■■□□□ 1.34
TUBB3-212ENST00000556565 MSH5O43196 834 aa23.39■■□□□ 1.33
TUBB3-212ENST00000556565 FLAD1Q8NFF5 587 aa23.39■■□□□ 1.33
TUBB3-212ENST00000556565 TJP1Q07157 1748 aa23.39■■□□□ 1.33
TUBB3-212ENST00000556565 TEFQ10587 303 aa23.38■■□□□ 1.33
TUBB3-212ENST00000556565 SLC39A6Q13433 755 aa23.38■■□□□ 1.33
TUBB3-212ENST00000556565 COL24A1Q17RW2 1714 aa23.38■■□□□ 1.33
TUBB3-212ENST00000556565 SIPA1L3O60292 1781 aaPredicted RBP23.37■■□□□ 1.33
TUBB3-212ENST00000556565 CNTNAP4Q9C0A0 1308 aa23.37■■□□□ 1.33
TUBB3-212ENST00000556565 GNPATO15228 680 aa23.37■■□□□ 1.33
TUBB3-212ENST00000556565 SSFA2P28290 1259 aa23.37■■□□□ 1.33
TUBB3-212ENST00000556565 PLEKHF1Q96S99 279 aa23.37■■□□□ 1.33
TUBB3-212ENST00000556565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.36■■□□□ 1.33
TUBB3-212ENST00000556565 PHF14O94880 888 aa23.36■■□□□ 1.33
TUBB3-212ENST00000556565 NEFMP07197 916 aa23.36■■□□□ 1.33
TUBB3-212ENST00000556565 SMIM5Q71RC9 77 aa23.36■■□□□ 1.33
TUBB3-212ENST00000556565 UBR2Q8IWV8 1755 aa23.35■■□□□ 1.33
TUBB3-212ENST00000556565 RTF1Q92541 710 aaKnown RBP23.34■■□□□ 1.33
TUBB3-212ENST00000556565 RC3H1Q5TC82 1133 aaKnown RBP23.33■■□□□ 1.33
TUBB3-212ENST00000556565 MCM10Q7L590 875 aa23.33■■□□□ 1.33
TUBB3-212ENST00000556565 PNNQ9H307 717 aaKnown RBP23.33■■□□□ 1.33
TUBB3-212ENST00000556565 MAPK8IP3Q9UPT6 1336 aa23.33■■□□□ 1.32
TUBB3-212ENST00000556565 HTATSF1O43719 755 aaKnown RBP23.32■■□□□ 1.32
TUBB3-212ENST00000556565 POLD1P28340 1107 aa23.32■■□□□ 1.32
TUBB3-212ENST00000556565 MSL1Q68DK7 614 aa23.32■■□□□ 1.32
TUBB3-212ENST00000556565 TTC5Q8N0Z6 440 aa23.32■■□□□ 1.32
TUBB3-212ENST00000556565 ARXQ96QS3 562 aa23.32■■□□□ 1.32
TUBB3-212ENST00000556565 CRKLP46109 303 aaKnown RBP23.31■■□□□ 1.32
TUBB3-212ENST00000556565 NFE2L2Q16236 605 aa23.31■■□□□ 1.32
TUBB3-212ENST00000556565 DNAJC10Q8IXB1 793 aa23.31■■□□□ 1.32
TUBB3-212ENST00000556565 RTCBQ9Y3I0 505 aaKnown RBP23.31■■□□□ 1.32
TUBB3-212ENST00000556565 MYH14Q7Z406 1995 aaKnown RBP23.31■■□□□ 1.32
TUBB3-212ENST00000556565 DCTN1Q14203 1278 aa23.3■■□□□ 1.32
TUBB3-212ENST00000556565 ZNF790Q6PG37 636 aa23.29■■□□□ 1.32
TUBB3-212ENST00000556565 FHDC1Q9C0D6 1143 aaPredicted RBP23.29■■□□□ 1.32
TUBB3-212ENST00000556565 DLG5Q8TDM6 1919 aa23.28■■□□□ 1.32
TUBB3-212ENST00000556565 RPS6KA4O75676 772 aa23.28■■□□□ 1.32
TUBB3-212ENST00000556565 WDR43Q15061 677 aaKnown RBP eCLIP23.28■■□□□ 1.32
TUBB3-212ENST00000556565 VSIG10Q8N0Z9 540 aa23.28■■□□□ 1.32
TUBB3-212ENST00000556565 BTBD11A6QL63 1104 aa23.27■■□□□ 1.32
TUBB3-212ENST00000556565 ADRA2BP18089 450 aa23.27■■□□□ 1.32
TUBB3-212ENST00000556565 ZNF496Q96IT1 587 aaPredicted RBP23.27■■□□□ 1.32
TUBB3-212ENST00000556565 TRAPPC3LQ5T215 181 aa23.26■■□□□ 1.31
TUBB3-212ENST00000556565 INTS5Q6P9B9 1019 aaKnown RBP23.26■■□□□ 1.31
TUBB3-212ENST00000556565 CCDC87Q9NVE4 849 aa23.26■■□□□ 1.31
TUBB3-212ENST00000556565 HEG1Q9ULI3 1381 aa23.26■■□□□ 1.31
TUBB3-212ENST00000556565 CYP19A1P11511 503 aaPredicted RBP23.25■■□□□ 1.31
TUBB3-212ENST00000556565 C4AP0C0L4 1744 aa23.25■■□□□ 1.31
TUBB3-212ENST00000556565 KCNQ3O43525 872 aa23.24■■□□□ 1.31
TUBB3-212ENST00000556565 ARHGEF1Q92888 912 aaKnown RBP23.24■■□□□ 1.31
TUBB3-212ENST00000556565 CCDC146Q8IYE0 955 aa23.23■■□□□ 1.31
TUBB3-212ENST00000556565 FMNL2Q96PY5 1086 aa23.23■■□□□ 1.31
TUBB3-212ENST00000556565 SYT17Q9BSW7 474 aa23.23■■□□□ 1.31
TUBB3-212ENST00000556565 ADAMTS8Q9UP79 889 aa23.22■■□□□ 1.31
TUBB3-212ENST00000556565 RFC4P35249 363 aa23.21■■□□□ 1.31
TUBB3-212ENST00000556565 KLHL34Q8N239 644 aa23.21■■□□□ 1.31
TUBB3-212ENST00000556565 THUMPD2Q9BTF0 503 aaKnown RBP23.21■■□□□ 1.31
TUBB3-212ENST00000556565 ZBTB1Q9Y2K1 713 aa23.21■■□□□ 1.31
TUBB3-212ENST00000556565 SOS1Q07889 1333 aaPredicted RBP23.21■■□□□ 1.31
TUBB3-212ENST00000556565 TMPOP42166 694 aaKnown RBP23.2■■□□□ 1.3
TUBB3-212ENST00000556565 TAF7Q15545 349 aaPredicted RBP23.2■■□□□ 1.3
TUBB3-212ENST00000556565 RUNDC1Q96C34 613 aa23.2■■□□□ 1.3
TUBB3-212ENST00000556565 STARD3NLO95772 234 aa23.19■■□□□ 1.3
TUBB3-212ENST00000556565 RIPK4P57078 832 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms