RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 MPRIPQ6WCQ1 1025 aa14.72□□□□□ -0.05
FOXN3-212ENST00000556541 CFAP44Q96MT7 982 aa14.72□□□□□ -0.05
FOXN3-212ENST00000556541 BTAF1O14981 1849 aa14.71□□□□□ -0.05
FOXN3-212ENST00000556541 E9PSI1 815 aa14.71□□□□□ -0.05
FOXN3-212ENST00000556541 CHL1O00533 1208 aa14.71□□□□□ -0.05
FOXN3-212ENST00000556541 GOLGA2Q08379 1002 aa14.71□□□□□ -0.05
FOXN3-212ENST00000556541 TEFQ10587 303 aa14.71□□□□□ -0.05
FOXN3-212ENST00000556541 TAF7Q15545 349 aaPredicted RBP14.71□□□□□ -0.05
FOXN3-212ENST00000556541 MCM10Q7L590 875 aa14.71□□□□□ -0.05
FOXN3-212ENST00000556541 TRMT2AQ8IZ69 625 aaKnown RBP14.71□□□□□ -0.05
FOXN3-212ENST00000556541 LGR6Q9HBX8 967 aa14.71□□□□□ -0.05
FOXN3-212ENST00000556541 KAT6BQ8WYB5 2073 aa14.7□□□□□ -0.06
FOXN3-212ENST00000556541 TNS1Q9HBL0 1735 aaKnown RBP14.69□□□□□ -0.06
FOXN3-212ENST00000556541 SOS1Q07889 1333 aaPredicted RBP14.69□□□□□ -0.06
FOXN3-212ENST00000556541 CABP4P57796 275 aa14.69□□□□□ -0.06
FOXN3-212ENST00000556541 DCTN1Q14203 1278 aa14.69□□□□□ -0.06
FOXN3-212ENST00000556541 MYH16Q9H6N6 1097 aa14.69□□□□□ -0.06
FOXN3-212ENST00000556541 LY75O60449 1722 aa14.69□□□□□ -0.06
FOXN3-212ENST00000556541 SLFN5Q08AF3 891 aa14.68□□□□□ -0.06
FOXN3-212ENST00000556541 TMOD3Q9NYL9 352 aa14.68□□□□□ -0.06
FOXN3-212ENST00000556541 BCL11BQ9C0K0 894 aaPredicted RBP14.67□□□□□ -0.06
FOXN3-212ENST00000556541 HEG1Q9ULI3 1381 aa14.67□□□□□ -0.06
FOXN3-212ENST00000556541 KCPQ6ZWJ8 1503 aa14.66□□□□□ -0.06
FOXN3-212ENST00000556541 CACNA1FO60840 1977 aa14.66□□□□□ -0.06
FOXN3-212ENST00000556541 LAMB4A4D0S4 1761 aa14.66□□□□□ -0.06
FOXN3-212ENST00000556541 NFATC2IPQ8NCF5 419 aa14.66□□□□□ -0.06
FOXN3-212ENST00000556541 THUMPD2Q9BTF0 503 aaKnown RBP14.66□□□□□ -0.06
FOXN3-212ENST00000556541 BTBD11A6QL63 1104 aa14.65□□□□□ -0.06
FOXN3-212ENST00000556541 HOXB7P09629 217 aa14.65□□□□□ -0.06
FOXN3-212ENST00000556541 CT47B1P0C2W7 299 aaPredicted RBP14.65□□□□□ -0.06
FOXN3-212ENST00000556541 HMGB2P26583 209 aaKnown RBP14.65□□□□□ -0.06
FOXN3-212ENST00000556541 PRIM1P49642 420 aaKnown RBP14.65□□□□□ -0.06
FOXN3-212ENST00000556541 PIGBQ92521 554 aa14.65□□□□□ -0.06
FOXN3-212ENST00000556541 SMARCC1Q92922 1105 aaPredicted RBP14.65□□□□□ -0.06
FOXN3-212ENST00000556541 DUSP27Q5VZP5 1158 aa14.64□□□□□ -0.07
FOXN3-212ENST00000556541 ZNF790Q6PG37 636 aa14.64□□□□□ -0.07
FOXN3-212ENST00000556541 VSIG10Q8N0Z9 540 aa14.64□□□□□ -0.07
FOXN3-212ENST00000556541 MBIPQ9NS73 344 aa14.64□□□□□ -0.07
FOXN3-212ENST00000556541 SALL2Q9Y467 1007 aaPredicted RBP14.64□□□□□ -0.07
FOXN3-212ENST00000556541 FANCIQ9NVI1 1328 aa14.64□□□□□ -0.07
FOXN3-212ENST00000556541 ZNF428Q96B54 188 aa14.63□□□□□ -0.07
FOXN3-212ENST00000556541 CHMP4AQ9BY43 222 aa14.63□□□□□ -0.07
FOXN3-212ENST00000556541 TSPYL4Q9UJ04 414 aa14.63□□□□□ -0.07
FOXN3-212ENST00000556541 CCDC125Q86Z20 511 aa14.62□□□□□ -0.07
FOXN3-212ENST00000556541 SPINK5Q9NQ38 1064 aaPredicted RBP14.62□□□□□ -0.07
FOXN3-212ENST00000556541 C5P01031 1676 aa14.61□□□□□ -0.07
FOXN3-212ENST00000556541 COL5A3P25940 1745 aaPredicted RBP14.61□□□□□ -0.07
FOXN3-212ENST00000556541 TJP1Q07157 1748 aa14.61□□□□□ -0.07
FOXN3-212ENST00000556541 EIF4A1P60842 406 aaKnown RBP14.61□□□□□ -0.07
FOXN3-212ENST00000556541 TTC5Q8N0Z6 440 aa14.61□□□□□ -0.07
FOXN3-212ENST00000556541 ATG3Q9NT62 314 aa14.61□□□□□ -0.07
FOXN3-212ENST00000556541 TAF1LQ8IZX4 1826 aa14.61□□□□□ -0.07
FOXN3-212ENST00000556541 RREB1Q92766 1687 aa14.61□□□□□ -0.07
FOXN3-212ENST00000556541 PLSCR1O15162 318 aa14.6□□□□□ -0.07
FOXN3-212ENST00000556541 KCNQ2O43526 872 aa14.6□□□□□ -0.07
FOXN3-212ENST00000556541 CDCA7LQ96GN5 454 aa14.6□□□□□ -0.07
FOXN3-212ENST00000556541 ACSBG1Q96GR2 724 aa14.6□□□□□ -0.07
FOXN3-212ENST00000556541 FMNL2Q96PY5 1086 aa14.6□□□□□ -0.07
FOXN3-212ENST00000556541 PALLDQ8WX93 1383 aa14.6□□□□□ -0.07
FOXN3-212ENST00000556541 FAM182BQ5T319 152 aa14.59□□□□□ -0.07
FOXN3-212ENST00000556541 YTHDC1Q96MU7 727 aaKnown RBP14.59□□□□□ -0.07
FOXN3-212ENST00000556541 TEX13AQ9BXU3 409 aaPredicted RBP14.59□□□□□ -0.07
FOXN3-212ENST00000556541 EP400Q96L91 3159 aa14.59□□□□□ -0.07
FOXN3-212ENST00000556541 SYTL4Q96C24 671 aaPredicted RBP14.58□□□□□ -0.08
FOXN3-212ENST00000556541 ASAP1Q9ULH1 1129 aa14.58□□□□□ -0.08
FOXN3-212ENST00000556541 SENP3-EIF4A1A0A087X0R7 540 aa14.57□□□□□ -0.08
FOXN3-212ENST00000556541 GIGYF1O75420 1035 aaPredicted RBP14.57□□□□□ -0.08
FOXN3-212ENST00000556541 TRIM37O94972 964 aa14.57□□□□□ -0.08
FOXN3-212ENST00000556541 SNRPA1P09661 255 aaKnown RBP14.57□□□□□ -0.08
FOXN3-212ENST00000556541 SLC27A3Q5K4L6 730 aa14.57□□□□□ -0.08
FOXN3-212ENST00000556541 TSR2Q969E8 191 aaKnown RBP14.57□□□□□ -0.08
FOXN3-212ENST00000556541 ZNF496Q96IT1 587 aaPredicted RBP14.57□□□□□ -0.08
FOXN3-212ENST00000556541 LAS1LQ9Y4W2 734 aaKnown RBP14.57□□□□□ -0.08
FOXN3-212ENST00000556541 ERBB4Q15303 1308 aa14.57□□□□□ -0.08
FOXN3-212ENST00000556541 KCNQ3O43525 872 aa14.56□□□□□ -0.08
FOXN3-212ENST00000556541 SLC39A6Q13433 755 aa14.56□□□□□ -0.08
FOXN3-212ENST00000556541 MIS18AQ9NYP9 233 aa14.56□□□□□ -0.08
FOXN3-212ENST00000556541 LOC102724428A0A0B4J2F2 783 aa14.55□□□□□ -0.08
FOXN3-212ENST00000556541 BRPF1P55201 1214 aaPredicted RBP14.55□□□□□ -0.08
FOXN3-212ENST00000556541 SIK1P57059 783 aa14.55□□□□□ -0.08
FOXN3-212ENST00000556541 EXOSC9Q06265 439 aaKnown RBP14.55□□□□□ -0.08
FOXN3-212ENST00000556541 VAMP4O75379 141 aa14.54□□□□□ -0.08
FOXN3-212ENST00000556541 TWISTNBQ3B726 338 aaPredicted RBP14.54□□□□□ -0.08
FOXN3-212ENST00000556541 PTF1AQ7RTS3 328 aa14.54□□□□□ -0.08
FOXN3-212ENST00000556541 C8orf58Q8NAV2 365 aa14.54□□□□□ -0.08
FOXN3-212ENST00000556541 QSER1Q2KHR3 1735 aa14.53□□□□□ -0.08
FOXN3-212ENST00000556541 ALDH1L2Q3SY69 923 aa14.53□□□□□ -0.08
FOXN3-212ENST00000556541 RC3H1Q5TC82 1133 aaKnown RBP14.52□□□□□ -0.09
FOXN3-212ENST00000556541 SLC4A9Q96Q91 983 aa14.52□□□□□ -0.09
FOXN3-212ENST00000556541 MYH14Q7Z406 1995 aaKnown RBP14.52□□□□□ -0.09
FOXN3-212ENST00000556541 C4BP0C0L5 1744 aa14.52□□□□□ -0.09
FOXN3-212ENST00000556541 CNTNAP4Q9C0A0 1308 aa14.51□□□□□ -0.09
FOXN3-212ENST00000556541 STARD3NLO95772 234 aa14.51□□□□□ -0.09
FOXN3-212ENST00000556541 APBA3O96018 575 aa14.51□□□□□ -0.09
FOXN3-212ENST00000556541 BAG6P46379 1132 aa14.51□□□□□ -0.09
FOXN3-212ENST00000556541 SF3B2Q13435 895 aaKnown RBP14.51□□□□□ -0.09
FOXN3-212ENST00000556541 CCDC30Q5VVM6 783 aa14.51□□□□□ -0.09
FOXN3-212ENST00000556541 TSPYL6Q8N831 410 aa14.51□□□□□ -0.09
FOXN3-212ENST00000556541 NUP188Q5SRE5 1749 aa14.51□□□□□ -0.09
FOXN3-212ENST00000556541 PTCD1O75127 700 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms