RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 PPP1R1BQ9UD71 204 aaPredicted RBP10.91□□□□□ -0.66
VTI1B-206ENST00000556461 C5P01031 1676 aa10.91□□□□□ -0.66
VTI1B-206ENST00000556461 RNMTO43148 476 aaKnown RBP10.9□□□□□ -0.66
VTI1B-206ENST00000556461 ATP6V1AP38606 617 aa10.9□□□□□ -0.66
VTI1B-206ENST00000556461 CFAP53Q96M91 514 aa10.9□□□□□ -0.66
VTI1B-206ENST00000556461 UTRNP46939 3433 aa10.9□□□□□ -0.67
VTI1B-206ENST00000556461 C4BP0C0L5 1744 aa10.89□□□□□ -0.67
VTI1B-206ENST00000556461 QSER1Q2KHR3 1735 aa10.89□□□□□ -0.67
VTI1B-206ENST00000556461 TAF1LQ8IZX4 1826 aa10.89□□□□□ -0.67
VTI1B-206ENST00000556461 MSH5O43196 834 aa10.89□□□□□ -0.67
VTI1B-206ENST00000556461 PRKAR2BP31323 418 aa10.89□□□□□ -0.67
VTI1B-206ENST00000556461 RBM42Q9BTD8 480 aaKnown RBP10.89□□□□□ -0.67
VTI1B-206ENST00000556461 PTCD1O75127 700 aaKnown RBP10.88□□□□□ -0.67
VTI1B-206ENST00000556461 PHF14O94880 888 aa10.88□□□□□ -0.67
VTI1B-206ENST00000556461 U2AF1L5P0DN76 240 aaPredicted RBP10.88□□□□□ -0.67
VTI1B-206ENST00000556461 U2AF1Q01081 240 aaKnown RBP eCLIP10.88□□□□□ -0.67
VTI1B-206ENST00000556461 SLC39A6Q13433 755 aa10.88□□□□□ -0.67
VTI1B-206ENST00000556461 MSL1Q68DK7 614 aa10.88□□□□□ -0.67
VTI1B-206ENST00000556461 SLC16A10Q8TF71 515 aa10.88□□□□□ -0.67
VTI1B-206ENST00000556461 AK7Q96M32 723 aa10.88□□□□□ -0.67
VTI1B-206ENST00000556461 SLC52A2Q9HAB3 445 aa10.88□□□□□ -0.67
VTI1B-206ENST00000556461 SCN11AQ9UI33 1791 aa10.88□□□□□ -0.67
VTI1B-206ENST00000556461 IL17REQ8NFR9 667 aa10.87□□□□□ -0.67
VTI1B-206ENST00000556461 ARXQ96QS3 562 aa10.87□□□□□ -0.67
VTI1B-206ENST00000556461 FHDC1Q9C0D6 1143 aaPredicted RBP10.87□□□□□ -0.67
VTI1B-206ENST00000556461 NUDCQ9Y266 331 aa10.87□□□□□ -0.67
VTI1B-206ENST00000556461 GOLGB1Q14789 3259 aaKnown RBP10.87□□□□□ -0.67
VTI1B-206ENST00000556461 MRC1P22897 1456 aa10.87□□□□□ -0.67
VTI1B-206ENST00000556461 ADAMTS7Q9UKP4 1686 aa10.86□□□□□ -0.67
VTI1B-206ENST00000556461 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.86□□□□□ -0.67
VTI1B-206ENST00000556461 GNPATO15228 680 aa10.86□□□□□ -0.67
VTI1B-206ENST00000556461 GAS2L2Q8NHY3 880 aa10.86□□□□□ -0.67
VTI1B-206ENST00000556461 MAP3K5Q99683 1374 aa10.86□□□□□ -0.67
VTI1B-206ENST00000556461 UBR3Q6ZT12 1888 aa10.85□□□□□ -0.67
VTI1B-206ENST00000556461 COL24A1Q17RW2 1714 aa10.85□□□□□ -0.67
VTI1B-206ENST00000556461 SYT17Q9BSW7 474 aa10.85□□□□□ -0.67
VTI1B-206ENST00000556461 GNAT3A8MTJ3 354 aa10.84□□□□□ -0.67
VTI1B-206ENST00000556461 FCHSD2O94868 740 aa10.84□□□□□ -0.67
VTI1B-206ENST00000556461 SSFA2P28290 1259 aa10.84□□□□□ -0.67
VTI1B-206ENST00000556461 POLD1P28340 1107 aa10.84□□□□□ -0.67
VTI1B-206ENST00000556461 DNAJC10Q8IXB1 793 aa10.84□□□□□ -0.67
VTI1B-206ENST00000556461 FLAD1Q8NFF5 587 aa10.84□□□□□ -0.67
VTI1B-206ENST00000556461 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
VTI1B-206ENST00000556461 CNTNAP4Q9C0A0 1308 aa10.84□□□□□ -0.67
VTI1B-206ENST00000556461 ZEB1P37275 1124 aaPredicted RBP10.83□□□□□ -0.68
VTI1B-206ENST00000556461 DCTN1Q14203 1278 aa10.83□□□□□ -0.68
VTI1B-206ENST00000556461 RALBP1Q15311 655 aa10.83□□□□□ -0.68
VTI1B-206ENST00000556461 RC3H1Q5TC82 1133 aaKnown RBP10.83□□□□□ -0.68
VTI1B-206ENST00000556461 TJP1Q07157 1748 aa10.83□□□□□ -0.68
VTI1B-206ENST00000556461 ZNF831Q5JPB2 1677 aa10.82□□□□□ -0.68
VTI1B-206ENST00000556461 CEMIPQ8WUJ3 1361 aa10.82□□□□□ -0.68
VTI1B-206ENST00000556461 COL5A3P25940 1745 aaPredicted RBP10.82□□□□□ -0.68
VTI1B-206ENST00000556461 KCNQ3O43525 872 aa10.82□□□□□ -0.68
VTI1B-206ENST00000556461 RPS6KA4O75676 772 aa10.82□□□□□ -0.68
VTI1B-206ENST00000556461 HMGB2P26583 209 aaKnown RBP10.82□□□□□ -0.68
VTI1B-206ENST00000556461 CRKLP46109 303 aaKnown RBP10.82□□□□□ -0.68
VTI1B-206ENST00000556461 INTS5Q6P9B9 1019 aaKnown RBP10.82□□□□□ -0.68
VTI1B-206ENST00000556461 MCM10Q7L590 875 aa10.82□□□□□ -0.68
VTI1B-206ENST00000556461 KLHL34Q8N239 644 aa10.82□□□□□ -0.68
VTI1B-206ENST00000556461 NLGN2Q8NFZ4 835 aa10.82□□□□□ -0.68
VTI1B-206ENST00000556461 PLEKHF1Q96S99 279 aa10.82□□□□□ -0.68
VTI1B-206ENST00000556461 RTCBQ9Y3I0 505 aaKnown RBP10.82□□□□□ -0.68
VTI1B-206ENST00000556461 MYH14Q7Z406 1995 aaKnown RBP10.82□□□□□ -0.68
VTI1B-206ENST00000556461 VIRMAQ69YN4 1812 aaKnown RBP10.81□□□□□ -0.68
VTI1B-206ENST00000556461 TEFQ10587 303 aa10.81□□□□□ -0.68
VTI1B-206ENST00000556461 TRAPPC3LQ5T215 181 aa10.81□□□□□ -0.68
VTI1B-206ENST00000556461 ARHGEF1Q92888 912 aaKnown RBP10.81□□□□□ -0.68
VTI1B-206ENST00000556461 MYBBP1AQ9BQG0 1328 aaKnown RBP10.81□□□□□ -0.68
VTI1B-206ENST00000556461 CYP19A1P11511 503 aaPredicted RBP10.8□□□□□ -0.68
VTI1B-206ENST00000556461 ZNF496Q96IT1 587 aaPredicted RBP10.8□□□□□ -0.68
VTI1B-206ENST00000556461 ZNF790Q6PG37 636 aa10.79□□□□□ -0.68
VTI1B-206ENST00000556461 PRKRIP1Q9H875 184 aaPredicted RBP10.79□□□□□ -0.68
VTI1B-206ENST00000556461 SRP68Q9UHB9 627 aaKnown RBP10.79□□□□□ -0.68
VTI1B-206ENST00000556461 ZBTB1Q9Y2K1 713 aa10.79□□□□□ -0.68
VTI1B-206ENST00000556461 SIPA1L3O60292 1781 aaPredicted RBP10.79□□□□□ -0.68
VTI1B-206ENST00000556461 CICQ96RK0 1608 aaPredicted RBP10.79□□□□□ -0.68
VTI1B-206ENST00000556461 UBR2Q8IWV8 1755 aa10.78□□□□□ -0.68
VTI1B-206ENST00000556461 BTBD11A6QL63 1104 aa10.78□□□□□ -0.68
VTI1B-206ENST00000556461 GYS1P13807 737 aa10.78□□□□□ -0.68
VTI1B-206ENST00000556461 ADRA2BP18089 450 aa10.78□□□□□ -0.68
VTI1B-206ENST00000556461 NFE2L2Q16236 605 aa10.78□□□□□ -0.68
VTI1B-206ENST00000556461 TTC5Q8N0Z6 440 aa10.78□□□□□ -0.68
VTI1B-206ENST00000556461 VSIG10Q8N0Z9 540 aa10.78□□□□□ -0.68
VTI1B-206ENST00000556461 THUMPD2Q9BTF0 503 aaKnown RBP10.78□□□□□ -0.68
VTI1B-206ENST00000556461 CCDC87Q9NVE4 849 aa10.78□□□□□ -0.68
VTI1B-206ENST00000556461 SOS1Q07889 1333 aaPredicted RBP10.78□□□□□ -0.68
VTI1B-206ENST00000556461 HEG1Q9ULI3 1381 aa10.77□□□□□ -0.68
VTI1B-206ENST00000556461 PRAMEF22A3QJZ6 481 aa10.77□□□□□ -0.69
VTI1B-206ENST00000556461 MMP10P09238 476 aa10.77□□□□□ -0.69
VTI1B-206ENST00000556461 RFC4P35249 363 aa10.77□□□□□ -0.69
VTI1B-206ENST00000556461 FKBP8Q14318 412 aa10.77□□□□□ -0.69
VTI1B-206ENST00000556461 RTF1Q92541 710 aaKnown RBP10.77□□□□□ -0.69
VTI1B-206ENST00000556461 MIS18AQ9NYP9 233 aa10.77□□□□□ -0.69
VTI1B-206ENST00000556461 C4AP0C0L4 1744 aa10.76□□□□□ -0.69
VTI1B-206ENST00000556461 HTATSF1O43719 755 aaKnown RBP10.76□□□□□ -0.69
VTI1B-206ENST00000556461 CANXP27824 592 aaKnown RBP10.76□□□□□ -0.69
VTI1B-206ENST00000556461 CCDC146Q8IYE0 955 aa10.76□□□□□ -0.69
VTI1B-206ENST00000556461 FMNL2Q96PY5 1086 aa10.76□□□□□ -0.69
VTI1B-206ENST00000556461 USP42Q9H9J4 1324 aaKnown RBP10.76□□□□□ -0.69
VTI1B-206ENST00000556461 ZNF316A6NFI3 1004 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms