RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ESYT1Q9BSJ8 1104 aa7.08□□□□□ -1.28
ATXN3-241ENST00000556374 CHIC2Q9UKJ5 165 aa7.08□□□□□ -1.28
ATXN3-241ENST00000556374 ADAMTS8Q9UP79 889 aa7.08□□□□□ -1.28
ATXN3-241ENST00000556374 CFTRP13569 1480 aa7.08□□□□□ -1.28
ATXN3-241ENST00000556374 CLASP1Q7Z460 1538 aa7.07□□□□□ -1.28
ATXN3-241ENST00000556374 SLC27A3Q5K4L6 730 aa7.07□□□□□ -1.28
ATXN3-241ENST00000556374 RNFT1Q5M7Z0 435 aa7.07□□□□□ -1.28
ATXN3-241ENST00000556374 PRICKLE2Q7Z3G6 844 aa7.07□□□□□ -1.28
ATXN3-241ENST00000556374 ENAMQ9NRM1 1142 aa7.07□□□□□ -1.28
ATXN3-241ENST00000556374 MBIPQ9NS73 344 aa7.07□□□□□ -1.28
ATXN3-241ENST00000556374 MEN1O00255 615 aa7.06□□□□□ -1.28
ATXN3-241ENST00000556374 KANK3Q6NY19 840 aa7.06□□□□□ -1.28
ATXN3-241ENST00000556374 NBPF10Q6P3W6 841 aaKnown RBP7.06□□□□□ -1.28
ATXN3-241ENST00000556374 TAS1R3Q7RTX0 852 aa7.06□□□□□ -1.28
ATXN3-241ENST00000556374 PHTF2Q8N3S3 785 aa7.06□□□□□ -1.28
ATXN3-241ENST00000556374 SVOPQ8N4V2 548 aa7.06□□□□□ -1.28
ATXN3-241ENST00000556374 NBPF15Q8N660 670 aa7.06□□□□□ -1.28
ATXN3-241ENST00000556374 ZNF837Q96EG3 531 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-241ENST00000556374 XAGE2Q96GT9 111 aa7.06□□□□□ -1.28
ATXN3-241ENST00000556374 HRH3Q9Y5N1 445 aa7.06□□□□□ -1.28
ATXN3-241ENST00000556374 WASLO00401 505 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-241ENST00000556374 ADAMTS2O95450 1211 aa7.05□□□□□ -1.28
ATXN3-241ENST00000556374 F11P03951 625 aa7.05□□□□□ -1.28
ATXN3-241ENST00000556374 MAP7D1Q3KQU3 841 aa7.05□□□□□ -1.28
ATXN3-241ENST00000556374 SCARF2Q96GP6 870 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-241ENST00000556374 TRERF1Q96PN7 1200 aa7.05□□□□□ -1.28
ATXN3-241ENST00000556374 CFHR5Q9BXR6 569 aa7.05□□□□□ -1.28
ATXN3-241ENST00000556374 NSFL1CQ9UNZ2 370 aaKnown RBP7.05□□□□□ -1.28
ATXN3-241ENST00000556374 WIZO95785 1651 aa7.05□□□□□ -1.28
ATXN3-241ENST00000556374 KIF13AQ9H1H9 1805 aa7.04□□□□□ -1.28
ATXN3-241ENST00000556374 SCTRP47872 440 aa7.04□□□□□ -1.28
ATXN3-241ENST00000556374 CNKSR1Q969H4 720 aa7.04□□□□□ -1.28
ATXN3-241ENST00000556374 A0A1B0GTH6 734 aa7.03□□□□□ -1.28
ATXN3-241ENST00000556374 GTF2E1P29083 439 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-241ENST00000556374 MAP3K10Q02779 954 aa7.03□□□□□ -1.28
ATXN3-241ENST00000556374 CENPCQ03188 943 aa7.03□□□□□ -1.28
ATXN3-241ENST00000556374 POU4F2Q12837 409 aa7.03□□□□□ -1.28
ATXN3-241ENST00000556374 GAS6Q14393 721 aa7.03□□□□□ -1.28
ATXN3-241ENST00000556374 DBN1Q16643 649 aa7.03□□□□□ -1.28
ATXN3-241ENST00000556374 SLFNL1Q499Z3 407 aa7.03□□□□□ -1.28
ATXN3-241ENST00000556374 GPAT2Q6NUI2 795 aa7.03□□□□□ -1.28
ATXN3-241ENST00000556374 ARHGEF10LQ9HCE6 1279 aa7.03□□□□□ -1.28
ATXN3-241ENST00000556374 TIMMDC1Q9NPL8 285 aa7.03□□□□□ -1.28
ATXN3-241ENST00000556374 CUEDC1Q9NWM3 386 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-241ENST00000556374 LZTS3O60299 673 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-241ENST00000556374 FOXK2Q01167 660 aa7.02□□□□□ -1.29
ATXN3-241ENST00000556374 IRF5Q13568 498 aa7.02□□□□□ -1.29
ATXN3-241ENST00000556374 CCDC85AQ96PX6 553 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-241ENST00000556374 ZSCAN10Q96SZ4 725 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-241ENST00000556374 TBC1D2BQ9UPU7 963 aa7.02□□□□□ -1.29
ATXN3-241ENST00000556374 TARBP1Q13395 1621 aaKnown RBP7.01□□□□□ -1.29
ATXN3-241ENST00000556374 SYNJ1O43426 1573 aa7.01□□□□□ -1.29
ATXN3-241ENST00000556374 IL2RAP01589 272 aa7.01□□□□□ -1.29
ATXN3-241ENST00000556374 IGHA1P01876 353 aa7.01□□□□□ -1.29
ATXN3-241ENST00000556374 RHOQP17081 205 aa7.01□□□□□ -1.29
ATXN3-241ENST00000556374 MAP2K3P46734 347 aa7.01□□□□□ -1.29
ATXN3-241ENST00000556374 DOLKQ9UPQ8 538 aa7.01□□□□□ -1.29
ATXN3-241ENST00000556374 PHF24Q9UPV7 400 aa7.01□□□□□ -1.29
ATXN3-241ENST00000556374 TOPBP1Q92547 1522 aa7.01□□□□□ -1.29
ATXN3-241ENST00000556374 CELA2BP08218 269 aaPredicted RBP7□□□□□ -1.29
ATXN3-241ENST00000556374 IRS1P35568 1242 aa7□□□□□ -1.29
ATXN3-241ENST00000556374 MARSP56192 900 aaKnown RBP7□□□□□ -1.29
ATXN3-241ENST00000556374 GNASQ5JWF2 1037 aa7□□□□□ -1.29
ATXN3-241ENST00000556374 RIPOR1Q6ZS17 1223 aa7□□□□□ -1.29
ATXN3-241ENST00000556374 RNF135Q8IUD6 432 aa7□□□□□ -1.29
ATXN3-241ENST00000556374 FHDC1Q9C0D6 1143 aaPredicted RBP7□□□□□ -1.29
ATXN3-241ENST00000556374 NUCKS1Q9H1E3 243 aaKnown RBP7□□□□□ -1.29
ATXN3-241ENST00000556374 DNMT3AQ9Y6K1 912 aaPredicted RBP7□□□□□ -1.29
ATXN3-241ENST00000556374 IGF1RP08069 1367 aa6.99□□□□□ -1.29
ATXN3-241ENST00000556374 LYPD4Q6UWN0 246 aa6.99□□□□□ -1.29
ATXN3-241ENST00000556374 PPARGC1BQ86YN6 1023 aaKnown RBP6.99□□□□□ -1.29
ATXN3-241ENST00000556374 C1orf216Q8TAB5 229 aa6.99□□□□□ -1.29
ATXN3-241ENST00000556374 RHBDD1Q8TEB9 315 aa6.99□□□□□ -1.29
ATXN3-241ENST00000556374 PHF20L1A8MW92 1017 aa6.98□□□□□ -1.29
ATXN3-241ENST00000556374 BCRP11274 1271 aa6.98□□□□□ -1.29
ATXN3-241ENST00000556374 WWC1Q8IX03 1113 aa6.98□□□□□ -1.29
ATXN3-241ENST00000556374 WHAMMQ8TF30 809 aa6.98□□□□□ -1.29
ATXN3-241ENST00000556374 GAS2L1Q99501 681 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-241ENST00000556374 CDCA7Q9BWT1 371 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-241ENST00000556374 ERCC6L2Q5T890 1561 aa6.98□□□□□ -1.29
ATXN3-241ENST00000556374 DNMBPQ6XZF7 1577 aa6.98□□□□□ -1.29
ATXN3-241ENST00000556374 MX2P20592 715 aa6.97□□□□□ -1.29
ATXN3-241ENST00000556374 SEMA3FQ13275 785 aa6.97□□□□□ -1.29
ATXN3-241ENST00000556374 NFATC2IPQ8NCF5 419 aa6.97□□□□□ -1.29
ATXN3-241ENST00000556374 GTPBP3Q969Y2 492 aaKnown RBP6.97□□□□□ -1.29
ATXN3-241ENST00000556374 CRISPLD1Q9H336 500 aa6.97□□□□□ -1.29
ATXN3-241ENST00000556374 AQRO60306 1485 aaKnown RBP eCLIP6.97□□□□□ -1.29
ATXN3-241ENST00000556374 GAPVD1Q14C86 1478 aa6.97□□□□□ -1.29
ATXN3-241ENST00000556374 CSB-PGBD3P0DP91 1061 aa6.96□□□□□ -1.3
ATXN3-241ENST00000556374 MCM6Q14566 821 aa6.96□□□□□ -1.3
ATXN3-241ENST00000556374 EFHC2Q5JST6 749 aa6.96□□□□□ -1.3
ATXN3-241ENST00000556374 TMEM214Q6NUQ4 689 aaKnown RBP6.96□□□□□ -1.3
ATXN3-241ENST00000556374 ALYREFQ86V81 257 aaKnown RBP6.96□□□□□ -1.3
ATXN3-241ENST00000556374 PGBD3Q8N328 593 aa6.96□□□□□ -1.3
ATXN3-241ENST00000556374 BEND7Q8N7W2 519 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-241ENST00000556374 GDF2Q9UK05 429 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-241ENST00000556374 WDR97A6NE52 1622 aa6.95□□□□□ -1.3
ATXN3-241ENST00000556374 INHAP05111 366 aa6.95□□□□□ -1.3
ATXN3-241ENST00000556374 FIGNL1Q6PIW4 674 aa6.95□□□□□ -1.3
ATXN3-241ENST00000556374 SLC4A9Q96Q91 983 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms