RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 AK7Q96M32 723 aa18.27■□□□□ 0.52
TGFB3-204ENST00000556285 TMOD3Q9NYL9 352 aa18.27■□□□□ 0.52
TGFB3-204ENST00000556285 IGSF1Q8N6C5 1336 aa18.26■□□□□ 0.51
TGFB3-204ENST00000556285 ATP10DQ9P241 1426 aa18.26■□□□□ 0.51
TGFB3-204ENST00000556285 ZNF831Q5JPB2 1677 aa18.26■□□□□ 0.51
TGFB3-204ENST00000556285 SLC4A9Q96Q91 983 aa18.26■□□□□ 0.51
TGFB3-204ENST00000556285 BRCA1P38398 1863 aaKnown RBP18.26■□□□□ 0.51
TGFB3-204ENST00000556285 GIGYF1O75420 1035 aaPredicted RBP18.25■□□□□ 0.51
TGFB3-204ENST00000556285 ATG3Q9NT62 314 aa18.25■□□□□ 0.51
TGFB3-204ENST00000556285 CD2APQ9Y5K6 639 aa18.25■□□□□ 0.51
TGFB3-204ENST00000556285 ADCY9O60503 1353 aa18.25■□□□□ 0.51
TGFB3-204ENST00000556285 KDRP35968 1356 aa18.25■□□□□ 0.51
TGFB3-204ENST00000556285 FLAD1Q8NFF5 587 aa18.24■□□□□ 0.51
TGFB3-204ENST00000556285 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
TGFB3-204ENST00000556285 TJP1Q07157 1748 aa18.23■□□□□ 0.51
TGFB3-204ENST00000556285 CEP350Q5VT06 3117 aa18.23■□□□□ 0.51
TGFB3-204ENST00000556285 MORC1Q86VD1 984 aa18.23■□□□□ 0.51
TGFB3-204ENST00000556285 AEBP1Q8IUX7 1158 aa18.23■□□□□ 0.51
TGFB3-204ENST00000556285 CICQ96RK0 1608 aaPredicted RBP18.23■□□□□ 0.51
TGFB3-204ENST00000556285 GRIN3BO60391 1043 aa18.22■□□□□ 0.51
TGFB3-204ENST00000556285 ATP6V1AP38606 617 aa18.22■□□□□ 0.51
TGFB3-204ENST00000556285 SCN11AQ9UI33 1791 aa18.22■□□□□ 0.51
TGFB3-204ENST00000556285 GNPATO15228 680 aa18.21■□□□□ 0.51
TGFB3-204ENST00000556285 SSFA2P28290 1259 aa18.21■□□□□ 0.51
TGFB3-204ENST00000556285 ADAMTS7Q9UKP4 1686 aa18.2■□□□□ 0.5
TGFB3-204ENST00000556285 PXDNLA1KZ92 1463 aa18.2■□□□□ 0.5
TGFB3-204ENST00000556285 HMGB2P26583 209 aaKnown RBP18.19■□□□□ 0.5
TGFB3-204ENST00000556285 PLEKHO1Q53GL0 409 aaPredicted RBP18.19■□□□□ 0.5
TGFB3-204ENST00000556285 ZNF530Q6P9A1 599 aaPredicted RBP18.19■□□□□ 0.5
TGFB3-204ENST00000556285 ZNF526Q8TF50 670 aaPredicted RBP18.18■□□□□ 0.5
TGFB3-204ENST00000556285 DCAF5Q96JK2 942 aa18.18■□□□□ 0.5
TGFB3-204ENST00000556285 KNSTRNQ9Y448 316 aa18.18■□□□□ 0.5
TGFB3-204ENST00000556285 KIF7Q2M1P5 1343 aa18.18■□□□□ 0.5
TGFB3-204ENST00000556285 PLEKHG2Q9H7P9 1386 aa18.17■□□□□ 0.5
TGFB3-204ENST00000556285 ERVV-2B6SEH9 535 aa18.17■□□□□ 0.5
TGFB3-204ENST00000556285 KCNA4P22459 653 aa18.17■□□□□ 0.5
TGFB3-204ENST00000556285 AMER1Q5JTC6 1135 aaPredicted RBP18.17■□□□□ 0.5
TGFB3-204ENST00000556285 SULT6B1Q6IMI4 303 aa18.17■□□□□ 0.5
TGFB3-204ENST00000556285 RBM42Q9BTD8 480 aaKnown RBP18.17■□□□□ 0.5
TGFB3-204ENST00000556285 IL13P35225 146 aa18.16■□□□□ 0.5
TGFB3-204ENST00000556285 MMP10P09238 476 aa18.15■□□□□ 0.5
TGFB3-204ENST00000556285 AMOTQ4VCS5 1084 aa18.15■□□□□ 0.5
TGFB3-204ENST00000556285 ARFGEF1Q9Y6D6 1849 aa18.14■□□□□ 0.5
TGFB3-204ENST00000556285 HSP90AB1P08238 724 aaKnown RBP18.14■□□□□ 0.49
TGFB3-204ENST00000556285 MTHFSP49914 203 aa18.14■□□□□ 0.49
TGFB3-204ENST00000556285 CABP4P57796 275 aa18.14■□□□□ 0.49
TGFB3-204ENST00000556285 C10orf71Q711Q0 1435 aa18.14■□□□□ 0.49
TGFB3-204ENST00000556285 ARHGEF1Q92888 912 aaKnown RBP18.13■□□□□ 0.49
TGFB3-204ENST00000556285 NFATC2IPQ8NCF5 419 aa18.12■□□□□ 0.49
TGFB3-204ENST00000556285 AFDNP55196 1824 aaKnown RBP18.12■□□□□ 0.49
TGFB3-204ENST00000556285 PER1O15534 1290 aaPredicted RBP18.11■□□□□ 0.49
TGFB3-204ENST00000556285 PTCD1O75127 700 aaKnown RBP18.11■□□□□ 0.49
TGFB3-204ENST00000556285 GYS1P13807 737 aa18.11■□□□□ 0.49
TGFB3-204ENST00000556285 C1orf141Q5JVX7 400 aa18.11■□□□□ 0.49
TGFB3-204ENST00000556285 GPBP1L1Q9HC44 474 aaPredicted RBP18.11■□□□□ 0.49
TGFB3-204ENST00000556285 RTCBQ9Y3I0 505 aaKnown RBP18.11■□□□□ 0.49
TGFB3-204ENST00000556285 CNTNAP4Q9C0A0 1308 aa18.1■□□□□ 0.49
TGFB3-204ENST00000556285 A0A0G2JLW4 131 aa18.1■□□□□ 0.49
TGFB3-204ENST00000556285 TRAPPC3LQ5T215 181 aa18.1■□□□□ 0.49
TGFB3-204ENST00000556285 SBF1O95248 1867 aa18.09■□□□□ 0.49
TGFB3-204ENST00000556285 HMOX1P09601 288 aa18.09■□□□□ 0.49
TGFB3-204ENST00000556285 CC2D1BQ5T0F9 858 aaKnown RBP18.09■□□□□ 0.49
TGFB3-204ENST00000556285 RC3H1Q5TC82 1133 aaKnown RBP18.09■□□□□ 0.49
TGFB3-204ENST00000556285 SRP68Q9UHB9 627 aaKnown RBP18.09■□□□□ 0.49
TGFB3-204ENST00000556285 KIF3CO14782 793 aa18.08■□□□□ 0.48
TGFB3-204ENST00000556285 RPS6KA4O75676 772 aa18.08■□□□□ 0.48
TGFB3-204ENST00000556285 LGR6Q9HBX8 967 aa18.08■□□□□ 0.48
TGFB3-204ENST00000556285 DPEP1P16444 411 aa18.07■□□□□ 0.48
TGFB3-204ENST00000556285 KCNA3P22001 575 aa18.06■□□□□ 0.48
TGFB3-204ENST00000556285 CRKLP46109 303 aaKnown RBP18.06■□□□□ 0.48
TGFB3-204ENST00000556285 CNGB1Q14028 1251 aaPredicted RBP18.06■□□□□ 0.48
TGFB3-204ENST00000556285 UBR2Q8IWV8 1755 aa18.06■□□□□ 0.48
TGFB3-204ENST00000556285 RFC4P35249 363 aa18.05■□□□□ 0.48
TGFB3-204ENST00000556285 DDR1Q08345 913 aa18.05■□□□□ 0.48
TGFB3-204ENST00000556285 AKAP4Q5JQC9 854 aa18.05■□□□□ 0.48
TGFB3-204ENST00000556285 NLGN1Q8N2Q7 840 aa18.05■□□□□ 0.48
TGFB3-204ENST00000556285 BCS1LQ9Y276 419 aa18.05■□□□□ 0.48
TGFB3-204ENST00000556285 KCPQ6ZWJ8 1503 aa18.04■□□□□ 0.48
TGFB3-204ENST00000556285 MRC1P22897 1456 aa18.04■□□□□ 0.48
TGFB3-204ENST00000556285 FKBP8Q14318 412 aa18.04■□□□□ 0.48
TGFB3-204ENST00000556285 NRXN2Q9P2S2 1712 aa18.03■□□□□ 0.48
TGFB3-204ENST00000556285 CCDC88AQ3V6T2 1871 aa18.03■□□□□ 0.48
TGFB3-204ENST00000556285 SLC39A6Q13433 755 aa18.03■□□□□ 0.48
TGFB3-204ENST00000556285 MTHFSDQ2M296 383 aaKnown RBP18.03■□□□□ 0.48
TGFB3-204ENST00000556285 INTS5Q6P9B9 1019 aaKnown RBP18.03■□□□□ 0.48
TGFB3-204ENST00000556285 SLC52A2Q9HAB3 445 aa18.03■□□□□ 0.48
TGFB3-204ENST00000556285 DLEC1Q9Y238 1755 aa18.03■□□□□ 0.48
TGFB3-204ENST00000556285 SIPA1L3O60292 1781 aaPredicted RBP18.02■□□□□ 0.48
TGFB3-204ENST00000556285 RNMTO43148 476 aaKnown RBP18.02■□□□□ 0.48
TGFB3-204ENST00000556285 DIAPH1O60610 1272 aaKnown RBP18.02■□□□□ 0.48
TGFB3-204ENST00000556285 HSPA6P17066 643 aa18.02■□□□□ 0.48
TGFB3-204ENST00000556285 TGFB2P61812 414 aa18.02■□□□□ 0.48
TGFB3-204ENST00000556285 DNAJC10Q8IXB1 793 aa18.02■□□□□ 0.48
TGFB3-204ENST00000556285 USP42Q9H9J4 1324 aaKnown RBP18.01■□□□□ 0.47
TGFB3-204ENST00000556285 COL3A1P02461 1466 aaPredicted RBP18.01■□□□□ 0.47
TGFB3-204ENST00000556285 CCDC87Q9NVE4 849 aa18■□□□□ 0.47
TGFB3-204ENST00000556285 ANKRD31Q8N7Z5 1873 aa17.99■□□□□ 0.47
TGFB3-204ENST00000556285 FCHSD2O94868 740 aa17.99■□□□□ 0.47
TGFB3-204ENST00000556285 ARHGAP27Q6ZUM4 889 aa17.99■□□□□ 0.47
TGFB3-204ENST00000556285 NMRK2Q9NPI5 230 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms