RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 KNDC1Q76NI1 1749 aa9.24□□□□□ -0.93
PCNX1-211ENST00000556272 HDAC1Q13547 482 aaPredicted RBP9.23□□□□□ -0.93
PCNX1-211ENST00000556272 SSUH2Q9Y2M2 353 aa9.23□□□□□ -0.93
PCNX1-211ENST00000556272 U2AF1L5P0DN76 240 aaPredicted RBP9.23□□□□□ -0.93
PCNX1-211ENST00000556272 U2AF1Q01081 240 aaKnown RBP eCLIP9.23□□□□□ -0.93
PCNX1-211ENST00000556272 IDI1Q13907 227 aa9.23□□□□□ -0.93
PCNX1-211ENST00000556272 FAM43BQ6ZT52 329 aaPredicted RBP9.23□□□□□ -0.93
PCNX1-211ENST00000556272 KIF16BQ96L93 1317 aa9.22□□□□□ -0.93
PCNX1-211ENST00000556272 DZIP1LQ8IYY4 767 aaKnown RBP9.22□□□□□ -0.93
PCNX1-211ENST00000556272 TBC1D2Q9BYX2 928 aa9.22□□□□□ -0.93
PCNX1-211ENST00000556272 DDX19BQ9UMR2 479 aa9.22□□□□□ -0.93
PCNX1-211ENST00000556272 CAMK2BQ13554 666 aa9.22□□□□□ -0.93
PCNX1-211ENST00000556272 ALDH1L2Q3SY69 923 aa9.22□□□□□ -0.93
PCNX1-211ENST00000556272 FRAT1Q92837 279 aaPredicted RBP9.22□□□□□ -0.93
PCNX1-211ENST00000556272 PARNO95453 639 aaKnown RBP9.21□□□□□ -0.93
PCNX1-211ENST00000556272 HDGFL2Q7Z4V5 671 aaPredicted RBP9.21□□□□□ -0.93
PCNX1-211ENST00000556272 TMPOP42166 694 aaKnown RBP9.21□□□□□ -0.93
PCNX1-211ENST00000556272 MFSD10Q14728 455 aa9.21□□□□□ -0.93
PCNX1-211ENST00000556272 TBC1D32Q96NH3 1257 aa9.21□□□□□ -0.93
PCNX1-211ENST00000556272 CHMP4BQ9H444 224 aaKnown RBP9.21□□□□□ -0.93
PCNX1-211ENST00000556272 LRRC7Q96NW7 1537 aa9.21□□□□□ -0.94
PCNX1-211ENST00000556272 FER1L4A9Z1Z3 1794 aa9.21□□□□□ -0.94
PCNX1-211ENST00000556272 FAM135BQ49AJ0 1406 aa9.21□□□□□ -0.94
PCNX1-211ENST00000556272 CABP2Q9NPB3 220 aa9.21□□□□□ -0.94
PCNX1-211ENST00000556272 PCDHB15Q9Y5E8 787 aa9.21□□□□□ -0.94
PCNX1-211ENST00000556272 IPO8O15397 1037 aaKnown RBP9.2□□□□□ -0.94
PCNX1-211ENST00000556272 RLBP1P12271 317 aa9.2□□□□□ -0.94
PCNX1-211ENST00000556272 FTSJ3Q8IY81 847 aaKnown RBP9.2□□□□□ -0.94
PCNX1-211ENST00000556272 GPATCH11Q8N954 259 aa9.2□□□□□ -0.94
PCNX1-211ENST00000556272 ESF1Q9H501 851 aaKnown RBP9.2□□□□□ -0.94
PCNX1-211ENST00000556272 PDZRN3Q9UPQ7 1066 aa9.2□□□□□ -0.94
PCNX1-211ENST00000556272 RRP7AQ9Y3A4 280 aaKnown RBP9.2□□□□□ -0.94
PCNX1-211ENST00000556272 MON2Q7Z3U7 1717 aa9.2□□□□□ -0.94
PCNX1-211ENST00000556272 FCHSD2O94868 740 aa9.2□□□□□ -0.94
PCNX1-211ENST00000556272 TNNT2P45379 298 aaPredicted RBP9.2□□□□□ -0.94
PCNX1-211ENST00000556272 TAGLNQ01995 201 aaKnown RBP9.2□□□□□ -0.94
PCNX1-211ENST00000556272 CALD1Q05682 793 aaKnown RBP9.2□□□□□ -0.94
PCNX1-211ENST00000556272 LARGE2Q8N3Y3 721 aa9.2□□□□□ -0.94
PCNX1-211ENST00000556272 POLR3EQ9NVU0 708 aa9.2□□□□□ -0.94
PCNX1-211ENST00000556272 CDK12Q9NYV4 1490 aaPredicted RBP9.19□□□□□ -0.94
PCNX1-211ENST00000556272 FYB1O15117 783 aa9.19□□□□□ -0.94
PCNX1-211ENST00000556272 RECKO95980 971 aa9.19□□□□□ -0.94
PCNX1-211ENST00000556272 ATF7IPQ6VMQ6 1270 aa9.19□□□□□ -0.94
PCNX1-211ENST00000556272 TRIM35Q9UPQ4 493 aa9.19□□□□□ -0.94
PCNX1-211ENST00000556272 DIAPH1O60610 1272 aaKnown RBP9.19□□□□□ -0.94
PCNX1-211ENST00000556272 MTMR14Q8NCE2 650 aa9.19□□□□□ -0.94
PCNX1-211ENST00000556272 ZNF467Q7Z7K2 595 aaPredicted RBP9.18□□□□□ -0.94
PCNX1-211ENST00000556272 DNAJC2Q99543 621 aaKnown RBP9.18□□□□□ -0.94
PCNX1-211ENST00000556272 AATKQ6ZMQ8 1374 aa9.18□□□□□ -0.94
PCNX1-211ENST00000556272 PIK3R4Q99570 1358 aa9.18□□□□□ -0.94
PCNX1-211ENST00000556272 A2ML1A8K2U0 1454 aa9.18□□□□□ -0.94
PCNX1-211ENST00000556272 EDC4Q6P2E9 1401 aaKnown RBP9.18□□□□□ -0.94
PCNX1-211ENST00000556272 AKAP12Q02952 1782 aa9.18□□□□□ -0.94
PCNX1-211ENST00000556272 SMC5Q8IY18 1101 aa9.18□□□□□ -0.94
PCNX1-211ENST00000556272 SMC4Q9NTJ3 1288 aa9.18□□□□□ -0.94
PCNX1-211ENST00000556272 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.18□□□□□ -0.94
PCNX1-211ENST00000556272 NME8Q8N427 588 aa9.17□□□□□ -0.94
PCNX1-211ENST00000556272 ARHGAP45Q92619 1136 aa9.17□□□□□ -0.94
PCNX1-211ENST00000556272 FAM212AQ96EL1 285 aa9.17□□□□□ -0.94
PCNX1-211ENST00000556272 PRAM1Q96QH2 718 aa9.17□□□□□ -0.94
PCNX1-211ENST00000556272 POGKQ9P215 609 aa9.17□□□□□ -0.94
PCNX1-211ENST00000556272 NRKQ7Z2Y5 1582 aa9.17□□□□□ -0.94
PCNX1-211ENST00000556272 MAP2P11137 1827 aaKnown RBP9.17□□□□□ -0.94
PCNX1-211ENST00000556272 NRXN3Q9Y4C0 1643 aa9.17□□□□□ -0.94
PCNX1-211ENST00000556272 CPS1P31327 1500 aa9.17□□□□□ -0.94
PCNX1-211ENST00000556272 CPSF1Q10570 1443 aaKnown RBP9.17□□□□□ -0.94
PCNX1-211ENST00000556272 PTCH1Q13635 1447 aa9.17□□□□□ -0.94
PCNX1-211ENST00000556272 TRIM27P14373 513 aa9.17□□□□□ -0.94
PCNX1-211ENST00000556272 ABL2P42684 1182 aa9.17□□□□□ -0.94
PCNX1-211ENST00000556272 EXOSC9Q06265 439 aaKnown RBP9.17□□□□□ -0.94
PCNX1-211ENST00000556272 ITSN1Q15811 1721 aa9.17□□□□□ -0.94
PCNX1-211ENST00000556272 TECPR2O15040 1411 aa9.17□□□□□ -0.94
PCNX1-211ENST00000556272 C3P01024 1663 aa9.16□□□□□ -0.94
PCNX1-211ENST00000556272 KIF24Q5T7B8 1368 aa9.16□□□□□ -0.94
PCNX1-211ENST00000556272 SLC4A3P48751 1232 aa9.16□□□□□ -0.94
PCNX1-211ENST00000556272 SF3A1Q15459 793 aaKnown RBP9.16□□□□□ -0.94
PCNX1-211ENST00000556272 ANTXR1Q9H6X2 564 aa9.16□□□□□ -0.94
PCNX1-211ENST00000556272 U2SURPO15042 1029 aaKnown RBP9.15□□□□□ -0.94
PCNX1-211ENST00000556272 PTMSP20962 102 aa9.15□□□□□ -0.94
PCNX1-211ENST00000556272 SSH1Q8WYL5 1049 aa9.15□□□□□ -0.94
PCNX1-211ENST00000556272 GGNBP2Q9H3C7 697 aa9.15□□□□□ -0.94
PCNX1-211ENST00000556272 PPFIA4O75335 1185 aa9.15□□□□□ -0.94
PCNX1-211ENST00000556272 RIPK4P57078 832 aa9.15□□□□□ -0.94
PCNX1-211ENST00000556272 PSME1Q06323 249 aa9.15□□□□□ -0.94
PCNX1-211ENST00000556272 RASEFQ8IZ41 740 aa9.15□□□□□ -0.94
PCNX1-211ENST00000556272 DDX27Q96GQ7 796 aaKnown RBP9.15□□□□□ -0.94
PCNX1-211ENST00000556272 CDK19Q9BWU1 502 aa9.15□□□□□ -0.94
PCNX1-211ENST00000556272 LNPKQ9C0E8 428 aa9.15□□□□□ -0.94
PCNX1-211ENST00000556272 ZBTB40Q9NUA8 1239 aa9.15□□□□□ -0.94
PCNX1-211ENST00000556272 RIMS2Q9UQ26 1411 aa9.15□□□□□ -0.95
PCNX1-211ENST00000556272 SEC24BO95487 1268 aa9.15□□□□□ -0.95
PCNX1-211ENST00000556272 RIMS1Q86UR5 1692 aaKnown RBP9.14□□□□□ -0.95
PCNX1-211ENST00000556272 C7P10643 843 aa9.14□□□□□ -0.95
PCNX1-211ENST00000556272 LMOD3Q0VAK6 560 aa9.14□□□□□ -0.95
PCNX1-211ENST00000556272 NPAS4Q8IUM7 802 aa9.14□□□□□ -0.95
PCNX1-211ENST00000556272 FRAT2O75474 233 aaPredicted RBP9.14□□□□□ -0.95
PCNX1-211ENST00000556272 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.14□□□□□ -0.95
PCNX1-211ENST00000556272 TNNQ9UQP3 1299 aa9.14□□□□□ -0.95
PCNX1-211ENST00000556272 ADAMTSL3P82987 1691 aa9.13□□□□□ -0.95
PCNX1-211ENST00000556272 HDGFL1Q5TGJ6 251 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms