RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 RIMS2Q9UQ26 1411 aa13.79□□□□□ -0.2
GTF2A1-204ENST00000556268 NEUROD2Q15784 382 aa13.78□□□□□ -0.2
GTF2A1-204ENST00000556268 PRR7Q8TB68 274 aa13.78□□□□□ -0.2
GTF2A1-204ENST00000556268 DDRGK1Q96HY6 314 aa13.78□□□□□ -0.2
GTF2A1-204ENST00000556268 C19orf44Q9H6X5 657 aa13.78□□□□□ -0.2
GTF2A1-204ENST00000556268 NWD1Q149M9 1564 aa13.78□□□□□ -0.2
GTF2A1-204ENST00000556268 HRCP23327 699 aa13.77□□□□□ -0.21
GTF2A1-204ENST00000556268 ZBTB3Q9H5J0 574 aa13.77□□□□□ -0.21
GTF2A1-204ENST00000556268 JCADQ9P266 1359 aa13.76□□□□□ -0.21
GTF2A1-204ENST00000556268 PLEKHG3A1L390 1219 aa13.76□□□□□ -0.21
GTF2A1-204ENST00000556268 SPDYE5A6NIY4 337 aa13.76□□□□□ -0.21
GTF2A1-204ENST00000556268 PPP1R15AO75807 674 aaPredicted RBP13.76□□□□□ -0.21
GTF2A1-204ENST00000556268 RPIAP49247 311 aa13.76□□□□□ -0.21
GTF2A1-204ENST00000556268 CLK2P49760 499 aaKnown RBP13.76□□□□□ -0.21
GTF2A1-204ENST00000556268 ZNF697Q5TEC3 545 aa13.76□□□□□ -0.21
GTF2A1-204ENST00000556268 ZNF598Q86UK7 904 aaKnown RBP13.76□□□□□ -0.21
GTF2A1-204ENST00000556268 CABLES1Q8TDN4 633 aa13.76□□□□□ -0.21
GTF2A1-204ENST00000556268 RSPH6AQ9H0K4 717 aa13.76□□□□□ -0.21
GTF2A1-204ENST00000556268 ROBO1Q9Y6N7 1651 aa13.75□□□□□ -0.21
GTF2A1-204ENST00000556268 PIK3R4Q99570 1358 aa13.75□□□□□ -0.21
GTF2A1-204ENST00000556268 PRPF38BQ5VTL8 546 aaKnown RBP13.75□□□□□ -0.21
GTF2A1-204ENST00000556268 CCDC24Q8N4L8 307 aa13.75□□□□□ -0.21
GTF2A1-204ENST00000556268 ADAMTS13Q76LX8 1427 aa13.74□□□□□ -0.21
GTF2A1-204ENST00000556268 ROCK1Q13464 1354 aa13.74□□□□□ -0.21
GTF2A1-204ENST00000556268 QPCTQ16769 361 aa13.74□□□□□ -0.21
GTF2A1-204ENST00000556268 POLR3EQ9NVU0 708 aa13.74□□□□□ -0.21
GTF2A1-204ENST00000556268 TMEM131LA2VDJ0 1609 aa13.74□□□□□ -0.21
GTF2A1-204ENST00000556268 CHD2O14647 1828 aaKnown RBP13.74□□□□□ -0.21
GTF2A1-204ENST00000556268 CFAP99D6REC4 459 aa13.73□□□□□ -0.21
GTF2A1-204ENST00000556268 BRPF1P55201 1214 aaPredicted RBP13.73□□□□□ -0.21
GTF2A1-204ENST00000556268 TUSC1Q2TAM9 212 aa13.73□□□□□ -0.21
GTF2A1-204ENST00000556268 TRIM67Q6ZTA4 783 aa13.73□□□□□ -0.21
GTF2A1-204ENST00000556268 GFRA3O60609 400 aa13.72□□□□□ -0.21
GTF2A1-204ENST00000556268 NUTM2DQ5VT03 806 aaPredicted RBP13.72□□□□□ -0.21
GTF2A1-204ENST00000556268 NUDT12Q9BQG2 462 aa13.72□□□□□ -0.21
GTF2A1-204ENST00000556268 AMOTL2Q9Y2J4 779 aa13.72□□□□□ -0.21
GTF2A1-204ENST00000556268 SPATA31A6Q5VVP1 1343 aa13.71□□□□□ -0.21
GTF2A1-204ENST00000556268 ZBTB24O43167 697 aaPredicted RBP13.71□□□□□ -0.21
GTF2A1-204ENST00000556268 SH3D19Q5HYK7 790 aa13.71□□□□□ -0.21
GTF2A1-204ENST00000556268 PDZRN3Q9UPQ7 1066 aa13.71□□□□□ -0.21
GTF2A1-204ENST00000556268 LILRB3O75022 631 aa13.7□□□□□ -0.22
GTF2A1-204ENST00000556268 PRKCSHP14314 528 aaPredicted RBP13.7□□□□□ -0.22
GTF2A1-204ENST00000556268 ATF3P18847 181 aa13.7□□□□□ -0.22
GTF2A1-204ENST00000556268 NUP155O75694 1391 aa13.7□□□□□ -0.22
GTF2A1-204ENST00000556268 PTPRNQ16849 979 aa13.69□□□□□ -0.22
GTF2A1-204ENST00000556268 DESI1Q6ICB0 168 aa13.69□□□□□ -0.22
GTF2A1-204ENST00000556268 PTPRUQ92729 1446 aa13.68□□□□□ -0.22
GTF2A1-204ENST00000556268 NUTM2BA6NNL0 878 aaPredicted RBP13.68□□□□□ -0.22
GTF2A1-204ENST00000556268 NUTM2EB1AL46 878 aaPredicted RBP13.68□□□□□ -0.22
GTF2A1-204ENST00000556268 CD2BP2O95400 341 aaKnown RBP13.68□□□□□ -0.22
GTF2A1-204ENST00000556268 CCNYL3P0C7X3 344 aa13.68□□□□□ -0.22
GTF2A1-204ENST00000556268 TRIM32Q13049 653 aa13.68□□□□□ -0.22
GTF2A1-204ENST00000556268 LAPTM4AQ15012 233 aa13.68□□□□□ -0.22
GTF2A1-204ENST00000556268 BRINP3Q76B58 766 aa13.68□□□□□ -0.22
GTF2A1-204ENST00000556268 C14orf37Q86TY3 774 aa13.68□□□□□ -0.22
GTF2A1-204ENST00000556268 NUTM2AQ8IVF1 878 aaPredicted RBP13.68□□□□□ -0.22
GTF2A1-204ENST00000556268 UNC13BO14795 1591 aa13.67□□□□□ -0.22
GTF2A1-204ENST00000556268 MYO5BQ9ULV0 1848 aa13.67□□□□□ -0.22
GTF2A1-204ENST00000556268 SKIV2LQ15477 1246 aaKnown RBP13.67□□□□□ -0.22
GTF2A1-204ENST00000556268 ZNF772Q68DY9 489 aaPredicted RBP13.67□□□□□ -0.22
GTF2A1-204ENST00000556268 NRG2O14511 850 aaPredicted RBP13.66□□□□□ -0.22
GTF2A1-204ENST00000556268 GCC2Q8IWJ2 1684 aa13.66□□□□□ -0.22
GTF2A1-204ENST00000556268 COL16A1Q07092 1604 aaPredicted RBP13.65□□□□□ -0.22
GTF2A1-204ENST00000556268 PHLPP1O60346 1717 aa13.65□□□□□ -0.22
GTF2A1-204ENST00000556268 TNFRSF10AO00220 468 aa13.65□□□□□ -0.22
GTF2A1-204ENST00000556268 GDF9O60383 454 aa13.65□□□□□ -0.22
GTF2A1-204ENST00000556268 RTL5Q5HYW3 569 aaPredicted RBP13.65□□□□□ -0.22
GTF2A1-204ENST00000556268 E9PCH4 1651 aa13.65□□□□□ -0.22
GTF2A1-204ENST00000556268 DIP2AQ14689 1571 aa13.64□□□□□ -0.23
GTF2A1-204ENST00000556268 PRR20EP86478 221 aa13.64□□□□□ -0.23
GTF2A1-204ENST00000556268 PRR20CP86479 221 aa13.64□□□□□ -0.23
GTF2A1-204ENST00000556268 PRR20DP86480 221 aa13.64□□□□□ -0.23
GTF2A1-204ENST00000556268 PRR20BP86481 221 aa13.64□□□□□ -0.23
GTF2A1-204ENST00000556268 PRR20AP86496 221 aa13.64□□□□□ -0.23
GTF2A1-204ENST00000556268 FOXC1Q12948 553 aa13.64□□□□□ -0.23
GTF2A1-204ENST00000556268 PTCRAQ6ISU1 281 aaPredicted RBP13.64□□□□□ -0.23
GTF2A1-204ENST00000556268 TSC1Q92574 1164 aa13.64□□□□□ -0.23
GTF2A1-204ENST00000556268 PKD2L1Q9P0L9 805 aa13.64□□□□□ -0.23
GTF2A1-204ENST00000556268 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.64□□□□□ -0.23
GTF2A1-204ENST00000556268 LYPD8Q6UX82 237 aa13.63□□□□□ -0.23
GTF2A1-204ENST00000556268 PROCA1Q8NCQ7 364 aaPredicted RBP13.63□□□□□ -0.23
GTF2A1-204ENST00000556268 LRP6O75581 1613 aa13.63□□□□□ -0.23
GTF2A1-204ENST00000556268 AHDC1Q5TGY3 1603 aaPredicted RBP13.63□□□□□ -0.23
GTF2A1-204ENST00000556268 IQGAP3Q86VI3 1631 aa13.63□□□□□ -0.23
GTF2A1-204ENST00000556268 Q6ZNB5 142 aa13.62□□□□□ -0.23
GTF2A1-204ENST00000556268 IL27Q8NEV9 243 aa13.62□□□□□ -0.23
GTF2A1-204ENST00000556268 DCCP43146 1447 aa13.62□□□□□ -0.23
GTF2A1-204ENST00000556268 METP08581 1390 aa13.61□□□□□ -0.23
GTF2A1-204ENST00000556268 RXRBP28702 533 aa13.61□□□□□ -0.23
GTF2A1-204ENST00000556268 MEX3CQ5U5Q3 659 aaKnown RBP13.61□□□□□ -0.23
GTF2A1-204ENST00000556268 LRRC59Q96AG4 307 aaKnown RBP13.61□□□□□ -0.23
GTF2A1-204ENST00000556268 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.61□□□□□ -0.23
GTF2A1-204ENST00000556268 EVA1BQ9NVM1 165 aa13.61□□□□□ -0.23
GTF2A1-204ENST00000556268 SETD5Q9C0A6 1442 aa13.61□□□□□ -0.23
GTF2A1-204ENST00000556268 TRPM2O94759 1503 aa13.6□□□□□ -0.23
GTF2A1-204ENST00000556268 ITGAEP38570 1179 aa13.6□□□□□ -0.23
GTF2A1-204ENST00000556268 PER1O15534 1290 aaPredicted RBP13.59□□□□□ -0.23
GTF2A1-204ENST00000556268 KCNH2Q12809 1159 aa13.59□□□□□ -0.23
GTF2A1-204ENST00000556268 ZNF326Q5BKZ1 582 aaKnown RBP13.59□□□□□ -0.23
GTF2A1-204ENST00000556268 UNC93B1Q9H1C4 597 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms